RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 ALDH1L2Q3SY69 923 aa27.36■■□□□ 1.97
RETREG3-202ENST00000585726 N4BP2Q86UW6 1770 aaPredicted RBP27.35■■□□□ 1.97
RETREG3-202ENST00000585726 F6X3S4 739 aa27.35■■□□□ 1.97
RETREG3-202ENST00000585726 H0YIN7 160 aa27.35■■□□□ 1.97
RETREG3-202ENST00000585726 NEXNQ0ZGT2 675 aa27.35■■□□□ 1.97
RETREG3-202ENST00000585726 DNAAF4Q8WXU2 420 aa27.35■■□□□ 1.97
RETREG3-202ENST00000585726 ABCC12Q96J65 1359 aa27.35■■□□□ 1.97
RETREG3-202ENST00000585726 RTL5Q5HYW3 569 aaPredicted RBP27.34■■□□□ 1.97
RETREG3-202ENST00000585726 IBTKQ9P2D0 1353 aaPredicted RBP27.34■■□□□ 1.97
RETREG3-202ENST00000585726 KCNA3P22001 575 aa27.33■■□□□ 1.97
RETREG3-202ENST00000585726 SYNE4Q8N205 404 aa27.33■■□□□ 1.97
RETREG3-202ENST00000585726 CACNA1FO60840 1977 aa27.32■■□□□ 1.96
RETREG3-202ENST00000585726 RARSP54136 660 aaKnown RBP27.32■■□□□ 1.96
RETREG3-202ENST00000585726 TRIM28Q13263 835 aaKnown RBP27.32■■□□□ 1.96
RETREG3-202ENST00000585726 CWF19L2Q2TBE0 894 aaKnown RBP27.32■■□□□ 1.96
RETREG3-202ENST00000585726 ZNF622Q969S3 477 aaKnown RBP eCLIP27.32■■□□□ 1.96
RETREG3-202ENST00000585726 KIAA1551Q9HCM1 1747 aa27.32■■□□□ 1.96
RETREG3-202ENST00000585726 IGKV5-2P06315 115 aa27.31■■□□□ 1.96
RETREG3-202ENST00000585726 FAM89AQ96GI7 184 aa27.31■■□□□ 1.96
RETREG3-202ENST00000585726 CWC25Q9NXE8 425 aaPredicted RBP27.31■■□□□ 1.96
RETREG3-202ENST00000585726 PIM2Q9P1W9 311 aa27.31■■□□□ 1.96
RETREG3-202ENST00000585726 BCS1LQ9Y276 419 aa27.31■■□□□ 1.96
RETREG3-202ENST00000585726 SH3TC1Q8TE82 1336 aa27.31■■□□□ 1.96
RETREG3-202ENST00000585726 ANKRD31Q8N7Z5 1873 aa27.31■■□□□ 1.96
RETREG3-202ENST00000585726 SLC4A10Q6U841 1118 aa27.3■■□□□ 1.96
RETREG3-202ENST00000585726 CCDC191Q8NCU4 936 aa27.3■■□□□ 1.96
RETREG3-202ENST00000585726 JARID2Q92833 1246 aaPredicted RBP27.3■■□□□ 1.96
RETREG3-202ENST00000585726 HCLS1P14317 486 aaPredicted RBP27.29■■□□□ 1.96
RETREG3-202ENST00000585726 YBX3P16989 372 aaKnown RBP eCLIP27.29■■□□□ 1.96
RETREG3-202ENST00000585726 RNF123Q5XPI4 1314 aa27.28■■□□□ 1.96
RETREG3-202ENST00000585726 NOB1Q9ULX3 412 aaKnown RBP27.28■■□□□ 1.96
RETREG3-202ENST00000585726 PDZRN3Q9UPQ7 1066 aa27.28■■□□□ 1.96
RETREG3-202ENST00000585726 PTPRCP08575 1304 aa27.27■■□□□ 1.96
RETREG3-202ENST00000585726 NEURL1BA8MQ27 555 aa27.27■■□□□ 1.96
RETREG3-202ENST00000585726 DALRD3Q5D0E6 543 aaKnown RBP27.27■■□□□ 1.96
RETREG3-202ENST00000585726 BCAR3O75815 825 aa27.26■■□□□ 1.95
RETREG3-202ENST00000585726 SRGNP10124 158 aa27.26■■□□□ 1.95
RETREG3-202ENST00000585726 SLC10A5Q5PT55 438 aa27.26■■□□□ 1.95
RETREG3-202ENST00000585726 C3orf67Q6ZVT6 689 aa27.26■■□□□ 1.95
RETREG3-202ENST00000585726 ZBTB38Q8NAP3 1195 aaPredicted RBP27.26■■□□□ 1.95
RETREG3-202ENST00000585726 LINS1Q8NG48 757 aa27.26■■□□□ 1.95
RETREG3-202ENST00000585726 NLRP3Q96P20 1036 aa27.26■■□□□ 1.95
RETREG3-202ENST00000585726 TNRC6CQ9HCJ0 1690 aaKnown RBP27.25■■□□□ 1.95
RETREG3-202ENST00000585726 MASTLQ96GX5 879 aa27.25■■□□□ 1.95
RETREG3-202ENST00000585726 KLRG2A4D1S0 409 aaPredicted RBP27.24■■□□□ 1.95
RETREG3-202ENST00000585726 IRS4O14654 1257 aaPredicted RBP27.24■■□□□ 1.95
RETREG3-202ENST00000585726 BEND3Q5T5X7 828 aa27.24■■□□□ 1.95
RETREG3-202ENST00000585726 PCCAP05165 728 aaPredicted RBP27.23■■□□□ 1.95
RETREG3-202ENST00000585726 NPR1P16066 1061 aa27.23■■□□□ 1.95
RETREG3-202ENST00000585726 GCKRQ14397 625 aa27.23■■□□□ 1.95
RETREG3-202ENST00000585726 STYK1Q6J9G0 422 aa27.23■■□□□ 1.95
RETREG3-202ENST00000585726 TTLL6Q8N841 843 aa27.23■■□□□ 1.95
RETREG3-202ENST00000585726 RPGRQ92834 1020 aaKnown RBP27.23■■□□□ 1.95
RETREG3-202ENST00000585726 COL11A2P13942 1736 aaPredicted RBP27.23■■□□□ 1.95
RETREG3-202ENST00000585726 FRAT1Q92837 279 aaPredicted RBP27.22■■□□□ 1.95
RETREG3-202ENST00000585726 ZNF219Q9P2Y4 722 aaPredicted RBP27.22■■□□□ 1.95
RETREG3-202ENST00000585726 BRPF1P55201 1214 aaPredicted RBP27.21■■□□□ 1.95
RETREG3-202ENST00000585726 CNKSR1Q969H4 720 aa27.21■■□□□ 1.95
RETREG3-202ENST00000585726 RIC1Q4ADV7 1423 aa27.21■■□□□ 1.95
RETREG3-202ENST00000585726 CRY2Q49AN0 593 aa27.2■■□□□ 1.94
RETREG3-202ENST00000585726 SRCIN1Q9C0H9 1055 aa27.2■■□□□ 1.94
RETREG3-202ENST00000585726 KIF16BQ96L93 1317 aa27.19■■□□□ 1.94
RETREG3-202ENST00000585726 GRIN3BO60391 1043 aa27.19■■□□□ 1.94
RETREG3-202ENST00000585726 UBE3BQ7Z3V4 1068 aa27.19■■□□□ 1.94
RETREG3-202ENST00000585726 RBM17Q96I25 401 aaKnown RBP27.18■■□□□ 1.94
RETREG3-202ENST00000585726 API5Q9BZZ5 524 aaKnown RBP27.18■■□□□ 1.94
RETREG3-202ENST00000585726 DLEC1Q9Y238 1755 aa27.17■■□□□ 1.94
RETREG3-202ENST00000585726 BRCA1P38398 1863 aaKnown RBP27.17■■□□□ 1.94
RETREG3-202ENST00000585726 H7C1W4 665 aa27.17■■□□□ 1.94
RETREG3-202ENST00000585726 PRPF40BQ6NWY9 871 aaKnown RBP27.17■■□□□ 1.94
RETREG3-202ENST00000585726 ALDH1L1O75891 902 aa27.16■■□□□ 1.94
RETREG3-202ENST00000585726 ALDH1B1P30837 517 aa27.16■■□□□ 1.94
RETREG3-202ENST00000585726 ARHGAP27Q6ZUM4 889 aa27.16■■□□□ 1.94
RETREG3-202ENST00000585726 IPO8O15397 1037 aaKnown RBP27.15■■□□□ 1.94
RETREG3-202ENST00000585726 C21orf2O43822 256 aa27.15■■□□□ 1.94
RETREG3-202ENST00000585726 PDE8AO60658 829 aa27.15■■□□□ 1.94
RETREG3-202ENST00000585726 HSP90B1P14625 803 aaKnown RBP27.15■■□□□ 1.94
RETREG3-202ENST00000585726 CCDC85AQ96PX6 553 aaPredicted RBP27.15■■□□□ 1.94
RETREG3-202ENST00000585726 C9orf78Q9NZ63 289 aaPredicted RBP27.15■■□□□ 1.94
RETREG3-202ENST00000585726 CDHR2Q9BYE9 1310 aa27.15■■□□□ 1.94
RETREG3-202ENST00000585726 DDX60Q8IY21 1712 aaKnown RBP27.14■■□□□ 1.94
RETREG3-202ENST00000585726 HOXA10P31260 410 aaPredicted RBP27.14■■□□□ 1.94
RETREG3-202ENST00000585726 DDX46Q7L014 1031 aaKnown RBP27.13■■□□□ 1.93
RETREG3-202ENST00000585726 ARHGAP45Q92619 1136 aa27.13■■□□□ 1.93
RETREG3-202ENST00000585726 TNNQ9UQP3 1299 aa27.13■■□□□ 1.93
RETREG3-202ENST00000585726 GRM8O00222 908 aa27.12■■□□□ 1.93
RETREG3-202ENST00000585726 SF3B3Q15393 1217 aaKnown RBP27.12■■□□□ 1.93
RETREG3-202ENST00000585726 CRAMP1Q96RY5 1269 aa27.12■■□□□ 1.93
RETREG3-202ENST00000585726 CASP7P55210 303 aa27.11■■□□□ 1.93
RETREG3-202ENST00000585726 ZKSCAN2Q63HK3 967 aa27.11■■□□□ 1.93
RETREG3-202ENST00000585726 CLUAP1Q96AJ1 413 aa27.11■■□□□ 1.93
RETREG3-202ENST00000585726 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
RETREG3-202ENST00000585726 LAMB2P55268 1798 aa27.11■■□□□ 1.93
RETREG3-202ENST00000585726 ABCC4O15439 1325 aa27.11■■□□□ 1.93
RETREG3-202ENST00000585726 CACNA1SQ13698 1873 aa27.1■■□□□ 1.93
RETREG3-202ENST00000585726 TRIM27P14373 513 aa27.1■■□□□ 1.93
RETREG3-202ENST00000585726 ATF7IPQ6VMQ6 1270 aa27.1■■□□□ 1.93
RETREG3-202ENST00000585726 SLX4Q8IY92 1834 aa27.1■■□□□ 1.93
RETREG3-202ENST00000585726 CCT4P50991 539 aaKnown RBP27.09■■□□□ 1.93
RETREG3-202ENST00000585726 CTSWP56202 376 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms