RNA–Protein interactions for RNA: ENST00000585178.1

LAMA1-208, Transcript of laminin subunit alpha 1, human

TSL 3

Gene LAMA1, Length 541 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA1-208	ENST00000585178	HSP90AB3P	Q58FF7	597 aa		13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	HDGFL1	Q5TGJ6	251 aa		13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	DPY19L2	Q6NUT2	758 aa		13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	OLFM4	Q6UX06	510 aa		13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	XAGE3	Q8WTP9	111 aa		13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	RPGR	Q92834	1020 aa	Known RBP	13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	PSMD1	Q99460	953 aa		13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	CHPF2	Q9P2E5	772 aa		13.71	□□□□□ -0.21
LAMA1-208	ENST00000585178	COL4A5	P29400	1685 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	ZEB1	P37275	1124 aa	Predicted RBP	13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	CC2D2B	Q6DHV5	1058 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	C3orf67	Q6ZVT6	689 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	COPS6	Q7L5N1	327 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	CRAMP1	Q96RY5	1269 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	UTP14A	Q9BVJ6	771 aa	Known RBP	13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	MBIP	Q9NS73	344 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	IFT57	Q9NWB7	429 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	LAS1L	Q9Y4W2	734 aa	Known RBP	13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	LAMB2	P55268	1798 aa		13.7	□□□□□ -0.22
LAMA1-208	ENST00000585178	APAF1	O14727	1248 aa		13.69	□□□□□ -0.22
LAMA1-208	ENST00000585178	CALD1	Q05682	793 aa	Known RBP	13.69	□□□□□ -0.22
LAMA1-208	ENST00000585178	GRIPAP1	Q4V328	841 aa		13.69	□□□□□ -0.22
LAMA1-208	ENST00000585178	SLC10A5	Q5PT55	438 aa		13.69	□□□□□ -0.22
LAMA1-208	ENST00000585178	NLRP10	Q86W26	655 aa		13.69	□□□□□ -0.22
LAMA1-208	ENST00000585178	NECTIN2	Q92692	538 aa		13.69	□□□□□ -0.22
LAMA1-208	ENST00000585178	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.69	□□□□□ -0.22
LAMA1-208	ENST00000585178	ADAMTSL1	Q8N6G6	1762 aa		13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	ZNF541	Q9H0D2	1346 aa		13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	LRRC37A	A6NMS7	1700 aa		13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	DDX60	Q8IY21	1712 aa	Known RBP	13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	PPEF1	O14829	653 aa	Predicted RBP	13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	IARS	P41252	1262 aa	Known RBP	13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	DNAJC5G	Q8N7S2	189 aa		13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	RBM17	Q96I25	401 aa	Known RBP	13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	DBF4	Q9UBU7	674 aa	Predicted RBP	13.68	□□□□□ -0.22
LAMA1-208	ENST00000585178	SCN4A	P35499	1836 aa		13.67	□□□□□ -0.22
LAMA1-208	ENST00000585178	DDN	O94850	711 aa	Predicted RBP	13.67	□□□□□ -0.22
LAMA1-208	ENST00000585178	AIMP1	Q12904	312 aa	Known RBP	13.67	□□□□□ -0.22
LAMA1-208	ENST00000585178	TCIRG1	Q13488	830 aa		13.67	□□□□□ -0.22
LAMA1-208	ENST00000585178	DUSP27	Q5VZP5	1158 aa		13.67	□□□□□ -0.22
LAMA1-208	ENST00000585178	PLBD2	Q8NHP8	589 aa		13.67	□□□□□ -0.22
LAMA1-208	ENST00000585178	NLRP3	Q96P20	1036 aa		13.67	□□□□□ -0.22
LAMA1-208	ENST00000585178	ABCC4	O15439	1325 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	SH3TC1	Q8TE82	1336 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	IQCA1L	A6NCM1	817 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	FZD9	O00144	591 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	GNAI1	P63096	354 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	SLC51A	Q86UW1	340 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	HYPK	Q9NX55	129 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	DUOX1	Q9NRD9	1551 aa		13.66	□□□□□ -0.22
LAMA1-208	ENST00000585178	SYNE4	Q8N205	404 aa		13.65	□□□□□ -0.22
LAMA1-208	ENST00000585178	ISCA1	Q9BUE6	129 aa		13.65	□□□□□ -0.22
LAMA1-208	ENST00000585178	CCDC27	Q2M243	656 aa		13.64	□□□□□ -0.23
LAMA1-208	ENST00000585178	CCDC184	Q52MB2	194 aa		13.64	□□□□□ -0.23
LAMA1-208	ENST00000585178	KLRG1	Q96E93	195 aa		13.64	□□□□□ -0.23
LAMA1-208	ENST00000585178	ATP6V0A2	Q9Y487	856 aa		13.64	□□□□□ -0.23
LAMA1-208	ENST00000585178	LTBP1	Q14766	1721 aa		13.64	□□□□□ -0.23
LAMA1-208	ENST00000585178	HTRA3	P83110	453 aa		13.63	□□□□□ -0.23
LAMA1-208	ENST00000585178	ANKRD13D	Q6ZTN6	518 aa		13.63	□□□□□ -0.23
LAMA1-208	ENST00000585178	LDHD	Q86WU2	507 aa		13.63	□□□□□ -0.23
LAMA1-208	ENST00000585178	GPC2	Q8N158	579 aa		13.63	□□□□□ -0.23
LAMA1-208	ENST00000585178	JMY	Q8N9B5	988 aa		13.63	□□□□□ -0.23
LAMA1-208	ENST00000585178	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.63	□□□□□ -0.23
LAMA1-208	ENST00000585178	TRMT112	Q9UI30	125 aa	Known RBP	13.63	□□□□□ -0.23
LAMA1-208	ENST00000585178	POTEI	P0CG38	1075 aa		13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	POTEJ	P0CG39	1038 aa		13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	HCLS1	P14317	486 aa	Predicted RBP	13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	TRIM28	Q13263	835 aa	Known RBP	13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	GRAP	Q13588	217 aa		13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	NCBP3	Q53F19	620 aa	Known RBP	13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	CHADL	Q6NUI6	762 aa		13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	GRAPL	Q8TC17	118 aa	Predicted RBP	13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	JDP2	Q8WYK2	163 aa		13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	COL4A1	P02462	1669 aa		13.62	□□□□□ -0.23
LAMA1-208	ENST00000585178	GOLGA2	Q08379	1002 aa		13.61	□□□□□ -0.23
LAMA1-208	ENST00000585178	VPS33B	Q9H267	617 aa		13.61	□□□□□ -0.23
LAMA1-208	ENST00000585178	HACL1	Q9UJ83	578 aa		13.61	□□□□□ -0.23
LAMA1-208	ENST00000585178	BBOX1	O75936	387 aa		13.6	□□□□□ -0.23
LAMA1-208	ENST00000585178	DDX46	Q7L014	1031 aa	Known RBP	13.6	□□□□□ -0.23
LAMA1-208	ENST00000585178	TMC4	Q7Z404	712 aa		13.6	□□□□□ -0.23
LAMA1-208	ENST00000585178	LARGE2	Q8N3Y3	721 aa		13.6	□□□□□ -0.23
LAMA1-208	ENST00000585178	C8orf58	Q8NAV2	365 aa		13.6	□□□□□ -0.23
LAMA1-208	ENST00000585178	IL16	Q14005	1332 aa		13.6	□□□□□ -0.23
LAMA1-208	ENST00000585178	PASK	Q96RG2	1323 aa		13.6	□□□□□ -0.23
LAMA1-208	ENST00000585178	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	ATP5J2-PTCD1	G3V325	749 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	PPIP5K2	O43314	1243 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	EPHX2	P34913	555 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	EIF6	P56537	245 aa	Known RBP	13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	SF3B3	Q15393	1217 aa	Known RBP	13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	WWC1	Q8IX03	1113 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	SP8	Q8IXZ3	490 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	NIM1K	Q8IY84	436 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	SUPT20H	Q8NEM7	779 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	CHMP4A	Q9BY43	222 aa		13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	TMX4	Q9H1E5	349 aa	Predicted RBP	13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	PHAX	Q9H814	394 aa	Known RBP	13.59	□□□□□ -0.23
LAMA1-208	ENST00000585178	TCERG1	O14776	1098 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms