RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
MKS1-213ENST00000585134 UTP14AQ9BVJ6 771 aaKnown RBP18.05■□□□□ 0.48
MKS1-213ENST00000585134 CT47B1P0C2W7 299 aaPredicted RBP18.04■□□□□ 0.48
MKS1-213ENST00000585134 TGFB2P61812 414 aa18.04■□□□□ 0.48
MKS1-213ENST00000585134 NEXNQ0ZGT2 675 aa18.04■□□□□ 0.48
MKS1-213ENST00000585134 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
MKS1-213ENST00000585134 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
MKS1-213ENST00000585134 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
MKS1-213ENST00000585134 BRIP1Q9BX63 1249 aa18.03■□□□□ 0.48
MKS1-213ENST00000585134 TRMT112Q9UI30 125 aaKnown RBP18.03■□□□□ 0.48
MKS1-213ENST00000585134 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.48
MKS1-213ENST00000585134 PDE6BP35913 854 aa18.02■□□□□ 0.48
MKS1-213ENST00000585134 RARSP54136 660 aaKnown RBP18.02■□□□□ 0.48
MKS1-213ENST00000585134 GPR162Q16538 588 aa18.02■□□□□ 0.48
MKS1-213ENST00000585134 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
MKS1-213ENST00000585134 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
MKS1-213ENST00000585134 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
MKS1-213ENST00000585134 SYNE4Q8N205 404 aa18.01■□□□□ 0.47
MKS1-213ENST00000585134 JARID2Q92833 1246 aaPredicted RBP18.01■□□□□ 0.47
MKS1-213ENST00000585134 ZNF622Q969S3 477 aaKnown RBP eCLIP18.01■□□□□ 0.47
MKS1-213ENST00000585134 CWC25Q9NXE8 425 aaPredicted RBP18.01■□□□□ 0.47
MKS1-213ENST00000585134 SH3TC1Q8TE82 1336 aa18■□□□□ 0.47
MKS1-213ENST00000585134 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
MKS1-213ENST00000585134 H0YIN7 160 aa18■□□□□ 0.47
MKS1-213ENST00000585134 FAM89AQ96GI7 184 aa18■□□□□ 0.47
MKS1-213ENST00000585134 BCS1LQ9Y276 419 aa18■□□□□ 0.47
MKS1-213ENST00000585134 BRCA1P38398 1863 aaKnown RBP18■□□□□ 0.47
MKS1-213ENST00000585134 RNF123Q5XPI4 1314 aa17.99■□□□□ 0.47
MKS1-213ENST00000585134 CACNA1SQ13698 1873 aa17.99■□□□□ 0.47
MKS1-213ENST00000585134 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
MKS1-213ENST00000585134 HCLS1P14317 486 aaPredicted RBP17.99■□□□□ 0.47
MKS1-213ENST00000585134 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
MKS1-213ENST00000585134 PTPRCP08575 1304 aa17.98■□□□□ 0.47
MKS1-213ENST00000585134 RIC1Q4ADV7 1423 aa17.98■□□□□ 0.47
MKS1-213ENST00000585134 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
MKS1-213ENST00000585134 BCAR3O75815 825 aa17.98■□□□□ 0.47
MKS1-213ENST00000585134 YBX3P16989 372 aaKnown RBP eCLIP17.98■□□□□ 0.47
MKS1-213ENST00000585134 KCNA3P22001 575 aa17.98■□□□□ 0.47
MKS1-213ENST00000585134 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
MKS1-213ENST00000585134 C3orf67Q6ZVT6 689 aa17.98■□□□□ 0.47
MKS1-213ENST00000585134 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
MKS1-213ENST00000585134 LAMB2P55268 1798 aa17.98■□□□□ 0.47
MKS1-213ENST00000585134 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
MKS1-213ENST00000585134 PIM2Q9P1W9 311 aa17.97■□□□□ 0.47
MKS1-213ENST00000585134 IRS4O14654 1257 aaPredicted RBP17.96■□□□□ 0.47
MKS1-213ENST00000585134 SRGNP10124 158 aa17.96■□□□□ 0.47
MKS1-213ENST00000585134 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
MKS1-213ENST00000585134 ZBTB38Q8NAP3 1195 aaPredicted RBP17.96■□□□□ 0.47
MKS1-213ENST00000585134 LINS1Q8NG48 757 aa17.96■□□□□ 0.47
MKS1-213ENST00000585134 RPGRQ92834 1020 aaKnown RBP17.96■□□□□ 0.47
MKS1-213ENST00000585134 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.47
MKS1-213ENST00000585134 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
MKS1-213ENST00000585134 PDZRN3Q9UPQ7 1066 aa17.96■□□□□ 0.47
MKS1-213ENST00000585134 PCCAP05165 728 aaPredicted RBP17.95■□□□□ 0.46
MKS1-213ENST00000585134 BEND3Q5T5X7 828 aa17.95■□□□□ 0.46
MKS1-213ENST00000585134 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
MKS1-213ENST00000585134 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
MKS1-213ENST00000585134 NPR1P16066 1061 aa17.94■□□□□ 0.46
MKS1-213ENST00000585134 GCKRQ14397 625 aa17.94■□□□□ 0.46
MKS1-213ENST00000585134 STYK1Q6J9G0 422 aa17.94■□□□□ 0.46
MKS1-213ENST00000585134 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
MKS1-213ENST00000585134 TTLL6Q8N841 843 aa17.94■□□□□ 0.46
MKS1-213ENST00000585134 API5Q9BZZ5 524 aaKnown RBP17.94■□□□□ 0.46
MKS1-213ENST00000585134 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
MKS1-213ENST00000585134 BRPF1P55201 1214 aaPredicted RBP17.92■□□□□ 0.46
MKS1-213ENST00000585134 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
MKS1-213ENST00000585134 SLC10A5Q5PT55 438 aa17.92■□□□□ 0.46
MKS1-213ENST00000585134 PRPF40BQ6NWY9 871 aaKnown RBP17.92■□□□□ 0.46
MKS1-213ENST00000585134 CNKSR1Q969H4 720 aa17.92■□□□□ 0.46
MKS1-213ENST00000585134 CCDC85AQ96PX6 553 aaPredicted RBP17.92■□□□□ 0.46
MKS1-213ENST00000585134 TNNQ9UQP3 1299 aa17.92■□□□□ 0.46
MKS1-213ENST00000585134 ARFGEF1Q9Y6D6 1849 aa17.92■□□□□ 0.46
MKS1-213ENST00000585134 KLRG2A4D1S0 409 aaPredicted RBP17.91■□□□□ 0.46
MKS1-213ENST00000585134 CDHR2Q9BYE9 1310 aa17.91■□□□□ 0.46
MKS1-213ENST00000585134 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
MKS1-213ENST00000585134 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
MKS1-213ENST00000585134 RBM17Q96I25 401 aaKnown RBP17.9■□□□□ 0.46
MKS1-213ENST00000585134 C9orf78Q9NZ63 289 aaPredicted RBP17.9■□□□□ 0.46
MKS1-213ENST00000585134 H7C1W4 665 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 GRM8O00222 908 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
MKS1-213ENST00000585134 C21orf2O43822 256 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 GRIN3BO60391 1043 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 PDE8AO60658 829 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
MKS1-213ENST00000585134 CLUAP1Q96AJ1 413 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 RCAN3Q9UKA8 241 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 ABCC4O15439 1325 aa17.89■□□□□ 0.45
MKS1-213ENST00000585134 CTSWP56202 376 aa17.88■□□□□ 0.45
MKS1-213ENST00000585134 ZKSCAN2Q63HK3 967 aa17.88■□□□□ 0.45
MKS1-213ENST00000585134 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
MKS1-213ENST00000585134 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
MKS1-213ENST00000585134 DDX46Q7L014 1031 aaKnown RBP17.88■□□□□ 0.45
MKS1-213ENST00000585134 SLC51AQ86UW1 340 aa17.88■□□□□ 0.45
MKS1-213ENST00000585134 MYH3P11055 1940 aa17.88■□□□□ 0.45
MKS1-213ENST00000585134 PPEF1O14829 653 aaPredicted RBP17.87■□□□□ 0.45
MKS1-213ENST00000585134 TRIM27P14373 513 aa17.87■□□□□ 0.45
MKS1-213ENST00000585134 ALDH1B1P30837 517 aa17.87■□□□□ 0.45
MKS1-213ENST00000585134 CCT4P50991 539 aaKnown RBP17.87■□□□□ 0.45
MKS1-213ENST00000585134 CASP7P55210 303 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms