RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 EVA1BQ9NVM1 165 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 MED1Q15648 1581 aaPredicted RBP7.83□□□□□ -1.16
CDH8-213ENST00000584966 PNPLA6Q8IY17 1366 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 CCDC7Q96M83 1385 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 NINLQ9Y2I6 1382 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 RGPD5Q99666 1765 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 ARID5BQ14865 1188 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 CDCA8Q53HL2 280 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 TNS3Q68CZ2 1445 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 TMC1Q8TDI8 760 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 CARD14Q9BXL6 1004 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 ANKRD26Q9UPS8 1709 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 MAP2P11137 1827 aaKnown RBP7.82□□□□□ -1.16
CDH8-213ENST00000584966 BRD4O60885 1362 aaPredicted RBP7.82□□□□□ -1.16
CDH8-213ENST00000584966 JCADQ9P266 1359 aa7.82□□□□□ -1.16
CDH8-213ENST00000584966 LRP6O75581 1613 aa7.81□□□□□ -1.16
CDH8-213ENST00000584966 TTC21BQ7Z4L5 1316 aa7.81□□□□□ -1.16
CDH8-213ENST00000584966 KCNH2Q12809 1159 aa7.81□□□□□ -1.16
CDH8-213ENST00000584966 PTPRNQ16849 979 aa7.81□□□□□ -1.16
CDH8-213ENST00000584966 COL25A1Q9BXS0 654 aaPredicted RBP7.81□□□□□ -1.16
CDH8-213ENST00000584966 DNMT3LQ9UJW3 386 aa7.81□□□□□ -1.16
CDH8-213ENST00000584966 COL18A1P39060 1754 aa7.81□□□□□ -1.16
CDH8-213ENST00000584966 KTN1Q86UP2 1357 aaKnown RBP7.81□□□□□ -1.16
CDH8-213ENST00000584966 ANKRD36BQ8N2N9 1353 aa7.81□□□□□ -1.16
CDH8-213ENST00000584966 LTN1O94822 1766 aa7.8□□□□□ -1.16
CDH8-213ENST00000584966 PER1O15534 1290 aaPredicted RBP7.8□□□□□ -1.16
CDH8-213ENST00000584966 UPP2O95045 317 aa7.8□□□□□ -1.16
CDH8-213ENST00000584966 PCDHGC3Q9UN70 934 aa7.8□□□□□ -1.16
CDH8-213ENST00000584966 EDC4Q6P2E9 1401 aaKnown RBP7.79□□□□□ -1.16
CDH8-213ENST00000584966 SLIT3O75094 1523 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 FDX1P10109 184 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 NUTM1Q86Y26 1132 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 FAM174AQ8TBP5 190 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 WHAMMQ8TF30 809 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 ZMYND15Q9H091 742 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 PANK3Q9H999 370 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 TERF2IPQ9NYB0 399 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 USP31Q70CQ4 1352 aa7.79□□□□□ -1.16
CDH8-213ENST00000584966 TTC21AQ8NDW8 1320 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 FYB1O15117 783 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 HDGFL2Q7Z4V5 671 aaPredicted RBP7.78□□□□□ -1.16
CDH8-213ENST00000584966 NME9Q86XW9 330 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 CABLES1Q8TDN4 633 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 ARHGEF10O15013 1369 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 PLCH1Q4KWH8 1693 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 NFAT5O94916 1531 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 OVOS2A0A0J9YW53 1432 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 OVOS2Q6IE36 1432 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 USP19O94966 1318 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 SPATA31A6Q5VVP1 1343 aa7.78□□□□□ -1.16
CDH8-213ENST00000584966 NR3C2P08235 984 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 MARSP56192 900 aaKnown RBP7.77□□□□□ -1.17
CDH8-213ENST00000584966 FOXK2Q01167 660 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 RNFT1Q5M7Z0 435 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 NUTM2GQ5VZR2 741 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.77□□□□□ -1.17
CDH8-213ENST00000584966 POLR3GLQ9BT43 218 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 NRAPQ86VF7 1730 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 NWD2Q9ULI1 1742 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 NSD3Q9BZ95 1437 aa7.77□□□□□ -1.17
CDH8-213ENST00000584966 LMO7Q8WWI1 1683 aa7.76□□□□□ -1.17
CDH8-213ENST00000584966 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.76□□□□□ -1.17
CDH8-213ENST00000584966 KANK3Q6NY19 840 aa7.76□□□□□ -1.17
CDH8-213ENST00000584966 CDK15Q96Q40 435 aa7.76□□□□□ -1.17
CDH8-213ENST00000584966 GOPCQ9HD26 462 aa7.76□□□□□ -1.17
CDH8-213ENST00000584966 RGPD2P0DJD1 1756 aa7.76□□□□□ -1.17
CDH8-213ENST00000584966 COL14A1Q05707 1796 aaKnown RBP7.76□□□□□ -1.17
CDH8-213ENST00000584966 ARHGEF15O94989 841 aa7.75□□□□□ -1.17
CDH8-213ENST00000584966 PTSQ03393 145 aa7.75□□□□□ -1.17
CDH8-213ENST00000584966 TTLL12Q14166 644 aaPredicted RBP7.75□□□□□ -1.17
CDH8-213ENST00000584966 GIGYF2Q6Y7W6 1299 aaKnown RBP7.75□□□□□ -1.17
CDH8-213ENST00000584966 NLRP13Q86W25 1043 aa7.75□□□□□ -1.17
CDH8-213ENST00000584966 MEIOBQ8N635 442 aa7.75□□□□□ -1.17
CDH8-213ENST00000584966 FOXJ1Q92949 421 aa7.75□□□□□ -1.17
CDH8-213ENST00000584966 RGS17Q9UGC6 210 aaPredicted RBP7.75□□□□□ -1.17
CDH8-213ENST00000584966 PEAK1Q9H792 1746 aa7.75□□□□□ -1.17
CDH8-213ENST00000584966 FAM83GA6ND36 823 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
CDH8-213ENST00000584966 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
CDH8-213ENST00000584966 GCP02774 474 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 FBLN1P23142 703 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 CTHP32929 405 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 NR5A1Q13285 461 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
CDH8-213ENST00000584966 PRR7Q8TB68 274 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 GGNBP2Q9H3C7 697 aa7.74□□□□□ -1.17
CDH8-213ENST00000584966 CAMTA1Q9Y6Y1 1673 aa7.73□□□□□ -1.17
CDH8-213ENST00000584966 SLIT2O94813 1529 aa7.73□□□□□ -1.17
CDH8-213ENST00000584966 CPDO75976 1380 aa7.73□□□□□ -1.17
CDH8-213ENST00000584966 ADAMTS2O95450 1211 aa7.73□□□□□ -1.17
CDH8-213ENST00000584966 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.17
CDH8-213ENST00000584966 FNBP4Q8N3X1 1017 aaPredicted RBP7.73□□□□□ -1.17
CDH8-213ENST00000584966 FAM217BQ9NTX9 383 aaPredicted RBP7.73□□□□□ -1.17
CDH8-213ENST00000584966 BCL9LQ86UU0 1499 aa7.73□□□□□ -1.17
CDH8-213ENST00000584966 KIAA0232Q92628 1395 aa7.72□□□□□ -1.17
CDH8-213ENST00000584966 FIGNL2A6NMB9 653 aa7.72□□□□□ -1.17
CDH8-213ENST00000584966 ADAM23O75077 832 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms