RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 RTN1Q16799 776 aa6.53□□□□□ -1.36
VAPA-208ENST00000584796 LARP1Q6PKG0 1096 aaKnown RBP6.53□□□□□ -1.36
VAPA-208ENST00000584796 EFCC1Q9HA90 598 aa6.53□□□□□ -1.36
VAPA-208ENST00000584796 FAM196BA6NMK8 535 aa6.52□□□□□ -1.37
VAPA-208ENST00000584796 IGFBP4P22692 258 aa6.52□□□□□ -1.37
VAPA-208ENST00000584796 DPYDQ12882 1025 aa6.52□□□□□ -1.37
VAPA-208ENST00000584796 PRRT3Q5FWE3 981 aa6.52□□□□□ -1.37
VAPA-208ENST00000584796 XP32Q5T750 250 aa6.52□□□□□ -1.37
VAPA-208ENST00000584796 C8orf86Q6ZUL3 223 aa6.52□□□□□ -1.37
VAPA-208ENST00000584796 CHMP7Q8WUX9 453 aaPredicted RBP6.52□□□□□ -1.37
VAPA-208ENST00000584796 CALR3Q96L12 384 aaKnown RBP6.52□□□□□ -1.37
VAPA-208ENST00000584796 USP17L15C9J2P7 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L10C9JJH3 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L13C9JLJ4 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L12C9JPN9 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L11C9JVI0 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L21D6R901 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L18D6R9N7 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L22D6RA61 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L17D6RBQ6 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L19D6RCP7 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L20D6RJB6 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 TGFBR3LH3BV60 316 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 ITGB7P26010 798 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 GATA4P43694 442 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 USP17L24Q0WX57 530 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 BHMTQ93088 406 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 NGLY1Q96IV0 654 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 DMGDHQ9UI17 866 aaKnown RBP6.51□□□□□ -1.37
VAPA-208ENST00000584796 BCS1LQ9Y276 419 aa6.51□□□□□ -1.37
VAPA-208ENST00000584796 ANKMY2Q8IV38 441 aa6.5□□□□□ -1.37
VAPA-208ENST00000584796 ARXQ96QS3 562 aa6.5□□□□□ -1.37
VAPA-208ENST00000584796 HINFPQ9BQA5 517 aa6.5□□□□□ -1.37
VAPA-208ENST00000584796 GSX2Q9BZM3 304 aa6.5□□□□□ -1.37
VAPA-208ENST00000584796 FAM229AH3BQW9 127 aa6.49□□□□□ -1.37
VAPA-208ENST00000584796 LILRB5O75023 590 aa6.49□□□□□ -1.37
VAPA-208ENST00000584796 GRNP28799 593 aaKnown RBP6.49□□□□□ -1.37
VAPA-208ENST00000584796 DOC2BQ14184 412 aa6.49□□□□□ -1.37
VAPA-208ENST00000584796 VRTNQ9H8Y1 702 aa6.49□□□□□ -1.37
VAPA-208ENST00000584796 SLC6A14Q9UN76 642 aa6.49□□□□□ -1.37
VAPA-208ENST00000584796 LGR5O75473 907 aa6.48□□□□□ -1.37
VAPA-208ENST00000584796 APBA3O96018 575 aa6.48□□□□□ -1.37
VAPA-208ENST00000584796 LMOD1P29536 600 aaPredicted RBP6.48□□□□□ -1.37
VAPA-208ENST00000584796 WEE1P30291 646 aa6.48□□□□□ -1.37
VAPA-208ENST00000584796 TRIM28Q13263 835 aaKnown RBP6.48□□□□□ -1.37
VAPA-208ENST00000584796 NACC1Q96RE7 527 aa6.48□□□□□ -1.37
VAPA-208ENST00000584796 UBE2OQ9C0C9 1292 aaKnown RBP6.48□□□□□ -1.37
VAPA-208ENST00000584796 INPP5BP32019 993 aa6.47□□□□□ -1.37
VAPA-208ENST00000584796 CCINQ13939 588 aa6.47□□□□□ -1.37
VAPA-208ENST00000584796 RSPO4Q2I0M5 234 aaPredicted RBP6.47□□□□□ -1.37
VAPA-208ENST00000584796 NKAPLQ5M9Q1 402 aa6.47□□□□□ -1.37
VAPA-208ENST00000584796 Q8N3U1 123 aa6.47□□□□□ -1.37
VAPA-208ENST00000584796 SEMA6BQ9H3T3 888 aa6.47□□□□□ -1.37
VAPA-208ENST00000584796 QTRT2Q9H974 415 aaKnown RBP6.47□□□□□ -1.37
VAPA-208ENST00000584796 DNAJB12Q9NXW2 375 aaKnown RBP6.47□□□□□ -1.37
VAPA-208ENST00000584796 NAGPAQ9UK23 515 aa6.47□□□□□ -1.37
VAPA-208ENST00000584796 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
VAPA-208ENST00000584796 FOXO3O43524 673 aa6.46□□□□□ -1.38
VAPA-208ENST00000584796 NFKB1P19838 968 aa6.46□□□□□ -1.38
VAPA-208ENST00000584796 TBC1D8BQ0IIM8 1120 aa6.46□□□□□ -1.38
VAPA-208ENST00000584796 GRIK4Q16099 956 aa6.46□□□□□ -1.38
VAPA-208ENST00000584796 CFAP70Q5T0N1 1121 aa6.46□□□□□ -1.38
VAPA-208ENST00000584796 ILDR2Q71H61 639 aa6.46□□□□□ -1.38
VAPA-208ENST00000584796 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.38
VAPA-208ENST00000584796 A0A0A0MRY4 1105 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 MAP3K6O95382 1288 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 EPB42P16452 691 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 AFF1P51825 1210 aaKnown RBP6.45□□□□□ -1.38
VAPA-208ENST00000584796 TRAPPC3LQ5T215 181 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 MYO19Q96H55 970 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 PNMA5Q96PV4 448 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 IGFLR1Q9H665 355 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 JPH1Q9HDC5 661 aaPredicted RBP6.45□□□□□ -1.38
VAPA-208ENST00000584796 C11orf16Q9NQ32 467 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 KLK14Q9P0G3 267 aa6.45□□□□□ -1.38
VAPA-208ENST00000584796 ELNP15502 786 aa6.44□□□□□ -1.38
VAPA-208ENST00000584796 IDH3AP50213 366 aa6.44□□□□□ -1.38
VAPA-208ENST00000584796 DGKZQ13574 1117 aa6.44□□□□□ -1.38
VAPA-208ENST00000584796 PSAPL1Q6NUJ1 521 aa6.44□□□□□ -1.38
VAPA-208ENST00000584796 NUDT8Q8WV74 236 aa6.44□□□□□ -1.38
VAPA-208ENST00000584796 SELPP16109 830 aa6.43□□□□□ -1.38
VAPA-208ENST00000584796 ARSDP51689 593 aa6.43□□□□□ -1.38
VAPA-208ENST00000584796 ADGRE1Q14246 886 aa6.43□□□□□ -1.38
VAPA-208ENST00000584796 PCSK7Q16549 785 aa6.43□□□□□ -1.38
VAPA-208ENST00000584796 ZFATQ9P243 1243 aa6.43□□□□□ -1.38
VAPA-208ENST00000584796 C9orf172C9J069 976 aa6.42□□□□□ -1.38
VAPA-208ENST00000584796 MICAL2O94851 1124 aa6.42□□□□□ -1.38
VAPA-208ENST00000584796 RAC1P63000 192 aa6.42□□□□□ -1.38
VAPA-208ENST00000584796 MBTPS1Q14703 1052 aa6.42□□□□□ -1.38
VAPA-208ENST00000584796 TRPM4Q8TD43 1214 aa6.42□□□□□ -1.38
VAPA-208ENST00000584796 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
VAPA-208ENST00000584796 FRRS1LQ9P0K9 344 aa6.42□□□□□ -1.38
VAPA-208ENST00000584796 DYRK3O43781 588 aa6.41□□□□□ -1.38
VAPA-208ENST00000584796 RGS9O75916 674 aaPredicted RBP6.41□□□□□ -1.38
VAPA-208ENST00000584796 C11orf91Q3C1V1 193 aa6.41□□□□□ -1.38
VAPA-208ENST00000584796 FAM35AQ86V20 835 aa6.41□□□□□ -1.38
VAPA-208ENST00000584796 FMR1NBQ8N0W7 255 aaPredicted RBP6.41□□□□□ -1.38
VAPA-208ENST00000584796 FAM200AQ8TCP9 573 aa6.41□□□□□ -1.38
VAPA-208ENST00000584796 IFT43Q96FT9 208 aa6.41□□□□□ -1.38
VAPA-208ENST00000584796 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms