RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 SLC51AQ86UW1 340 aa27.05■■□□□ 1.92
SRSF1-206ENST00000583741 PNISRQ8TF01 805 aaKnown RBP27.05■■□□□ 1.92
SRSF1-206ENST00000583741 PLEKHF1Q96S99 279 aa27.05■■□□□ 1.92
SRSF1-206ENST00000583741 RIC1Q4ADV7 1423 aa27.05■■□□□ 1.92
SRSF1-206ENST00000583741 GPTP24298 496 aa27.04■■□□□ 1.92
SRSF1-206ENST00000583741 GPC2Q8N158 579 aa27.04■■□□□ 1.92
SRSF1-206ENST00000583741 MYL6BP14649 208 aa27.03■■□□□ 1.92
SRSF1-206ENST00000583741 MAP1SQ66K74 1059 aaPredicted RBP27.03■■□□□ 1.92
SRSF1-206ENST00000583741 ZBTB3Q9H5J0 574 aa27.03■■□□□ 1.92
SRSF1-206ENST00000583741 IBTKQ9P2D0 1353 aaPredicted RBP27.03■■□□□ 1.92
SRSF1-206ENST00000583741 KIF6Q6ZMV9 814 aa27.02■■□□□ 1.92
SRSF1-206ENST00000583741 PNMA8AQ86V59 439 aaPredicted RBP27.02■■□□□ 1.92
SRSF1-206ENST00000583741 HOXA10P31260 410 aaPredicted RBP27.01■■□□□ 1.91
SRSF1-206ENST00000583741 JDP2Q8WYK2 163 aa27.01■■□□□ 1.91
SRSF1-206ENST00000583741 NEFMP07197 916 aa27■■□□□ 1.91
SRSF1-206ENST00000583741 NFE2L2Q16236 605 aa27■■□□□ 1.91
SRSF1-206ENST00000583741 SUSD4Q5VX71 490 aa27■■□□□ 1.91
SRSF1-206ENST00000583741 CNTROBQ8N137 903 aa27■■□□□ 1.91
SRSF1-206ENST00000583741 RPGRQ92834 1020 aaKnown RBP27■■□□□ 1.91
SRSF1-206ENST00000583741 CC2D2BQ6DHV5 1058 aa27■■□□□ 1.91
SRSF1-206ENST00000583741 C3orf67Q6ZVT6 689 aa27■■□□□ 1.91
SRSF1-206ENST00000583741 ZNF34Q8IZ26 560 aa26.99■■□□□ 1.91
SRSF1-206ENST00000583741 NTSR2O95665 410 aa26.98■■□□□ 1.91
SRSF1-206ENST00000583741 GJA3Q9Y6H8 435 aa26.98■■□□□ 1.91
SRSF1-206ENST00000583741 RASSF10A6NK89 507 aa26.96■■□□□ 1.91
SRSF1-206ENST00000583741 ANP32CO43423 234 aa26.96■■□□□ 1.91
SRSF1-206ENST00000583741 EIF6P56537 245 aaKnown RBP26.96■■□□□ 1.91
SRSF1-206ENST00000583741 TCERG1O14776 1098 aaKnown RBP26.95■■□□□ 1.91
SRSF1-206ENST00000583741 PPEF1O14829 653 aaPredicted RBP26.95■■□□□ 1.91
SRSF1-206ENST00000583741 SCNN1DP51172 638 aa26.95■■□□□ 1.91
SRSF1-206ENST00000583741 GIGYF2Q6Y7W6 1299 aaKnown RBP26.95■■□□□ 1.91
SRSF1-206ENST00000583741 CRAMP1Q96RY5 1269 aa26.95■■□□□ 1.91
SRSF1-206ENST00000583741 PRDM10Q9NQV6 1147 aa26.95■■□□□ 1.91
SRSF1-206ENST00000583741 WBP1LQ9NX94 342 aa26.95■■□□□ 1.91
SRSF1-206ENST00000583741 LARGE2Q8N3Y3 721 aa26.94■■□□□ 1.9
SRSF1-206ENST00000583741 AIDAQ96BJ3 306 aa26.94■■□□□ 1.9
SRSF1-206ENST00000583741 RBM17Q96I25 401 aaKnown RBP26.94■■□□□ 1.9
SRSF1-206ENST00000583741 CTCFP49711 727 aaPredicted RBP26.93■■□□□ 1.9
SRSF1-206ENST00000583741 LRP10Q7Z4F1 713 aa26.93■■□□□ 1.9
SRSF1-206ENST00000583741 MIER1Q8N108 512 aa26.93■■□□□ 1.9
SRSF1-206ENST00000583741 ERBB4Q15303 1308 aa26.93■■□□□ 1.9
SRSF1-206ENST00000583741 LAMB2P55268 1798 aa26.93■■□□□ 1.9
SRSF1-206ENST00000583741 EPS15P42566 896 aa26.93■■□□□ 1.9
SRSF1-206ENST00000583741 DEFB115Q30KQ5 88 aa26.93■■□□□ 1.9
SRSF1-206ENST00000583741 LMOD1P29536 600 aaPredicted RBP26.92■■□□□ 1.9
SRSF1-206ENST00000583741 FMR1Q06787 632 aaKnown RBP eCLIP26.92■■□□□ 1.9
SRSF1-206ENST00000583741 GRIPAP1Q4V328 841 aa26.92■■□□□ 1.9
SRSF1-206ENST00000583741 MAPK8IP3Q9UPT6 1336 aa26.92■■□□□ 1.9
SRSF1-206ENST00000583741 ANKRD36CQ5JPF3 1778 aa26.92■■□□□ 1.9
SRSF1-206ENST00000583741 PDIA6Q15084 440 aa26.91■■□□□ 1.9
SRSF1-206ENST00000583741 DDX21Q9NR30 783 aaKnown RBP eCLIP26.91■■□□□ 1.9
SRSF1-206ENST00000583741 PROSER3Q2NL68 480 aa26.9■■□□□ 1.9
SRSF1-206ENST00000583741 PPP1R42Q7Z4L9 355 aa26.9■■□□□ 1.9
SRSF1-206ENST00000583741 TSPYL4Q9UJ04 414 aa26.9■■□□□ 1.9
SRSF1-206ENST00000583741 ABT1Q9ULW3 272 aaKnown RBP26.9■■□□□ 1.9
SRSF1-206ENST00000583741 THSD7BQ9C0I4 1608 aa26.9■■□□□ 1.9
SRSF1-206ENST00000583741 TRPM7Q96QT4 1865 aa26.9■■□□□ 1.9
SRSF1-206ENST00000583741 LBX1P52954 281 aa26.89■■□□□ 1.9
SRSF1-206ENST00000583741 PARP10Q53GL7 1025 aa26.89■■□□□ 1.9
SRSF1-206ENST00000583741 WDR33Q9C0J8 1336 aaKnown RBP26.88■■□□□ 1.89
SRSF1-206ENST00000583741 ANXA1P04083 346 aa26.88■■□□□ 1.89
SRSF1-206ENST00000583741 PPIP5K2O43314 1243 aa26.87■■□□□ 1.89
SRSF1-206ENST00000583741 NIM1KQ8IY84 436 aa26.87■■□□□ 1.89
SRSF1-206ENST00000583741 NLRP3Q96P20 1036 aa26.87■■□□□ 1.89
SRSF1-206ENST00000583741 ABCC4O15439 1325 aa26.87■■□□□ 1.89
SRSF1-206ENST00000583741 EIF2S2P20042 333 aaKnown RBP26.87■■□□□ 1.89
SRSF1-206ENST00000583741 AOC3Q16853 763 aa26.87■■□□□ 1.89
SRSF1-206ENST00000583741 ATP6V0A2Q9Y487 856 aa26.87■■□□□ 1.89
SRSF1-206ENST00000583741 HSPA8P11142 646 aaKnown RBP26.86■■□□□ 1.89
SRSF1-206ENST00000583741 SLC10A5Q5PT55 438 aa26.86■■□□□ 1.89
SRSF1-206ENST00000583741 UTP14AQ9BVJ6 771 aaKnown RBP26.86■■□□□ 1.89
SRSF1-206ENST00000583741 PNNQ9H307 717 aaKnown RBP26.86■■□□□ 1.89
SRSF1-206ENST00000583741 TRAF5O00463 557 aa26.85■■□□□ 1.89
SRSF1-206ENST00000583741 USP50Q70EL3 339 aaPredicted RBP26.85■■□□□ 1.89
SRSF1-206ENST00000583741 PRKRIP1Q9H875 184 aaPredicted RBP26.85■■□□□ 1.89
SRSF1-206ENST00000583741 TAF1P21675 1872 aa26.84■■□□□ 1.89
SRSF1-206ENST00000583741 RIPK4P57078 832 aa26.83■■□□□ 1.89
SRSF1-206ENST00000583741 CST9Q5W186 159 aa26.82■■□□□ 1.88
SRSF1-206ENST00000583741 GPRC5DQ9NZD1 345 aa26.82■■□□□ 1.88
SRSF1-206ENST00000583741 MAP2K1Q02750 393 aaPredicted RBP26.81■■□□□ 1.88
SRSF1-206ENST00000583741 CXCL9Q07325 125 aa26.81■■□□□ 1.88
SRSF1-206ENST00000583741 CAPNS2Q96L46 248 aa26.81■■□□□ 1.88
SRSF1-206ENST00000583741 RTFDC1Q9BY42 306 aaPredicted RBP26.81■■□□□ 1.88
SRSF1-206ENST00000583741 NECTIN2Q92692 538 aa26.81■■□□□ 1.88
SRSF1-206ENST00000583741 TMX4Q9H1E5 349 aaPredicted RBP26.81■■□□□ 1.88
SRSF1-206ENST00000583741 HCLS1P14317 486 aaPredicted RBP26.8■■□□□ 1.88
SRSF1-206ENST00000583741 PAXIP1Q6ZW49 1069 aaPredicted RBP26.8■■□□□ 1.88
SRSF1-206ENST00000583741 COPS6Q7L5N1 327 aa26.8■■□□□ 1.88
SRSF1-206ENST00000583741 NLRP10Q86W26 655 aa26.8■■□□□ 1.88
SRSF1-206ENST00000583741 VPS33BQ9H267 617 aa26.8■■□□□ 1.88
SRSF1-206ENST00000583741 ADARB2Q9NS39 739 aaKnown RBP26.8■■□□□ 1.88
SRSF1-206ENST00000583741 ZNRF3Q9ULT6 936 aa26.8■■□□□ 1.88
SRSF1-206ENST00000583741 CYP4F22Q6NT55 531 aa26.79■■□□□ 1.88
SRSF1-206ENST00000583741 XAGE3Q8WTP9 111 aa26.79■■□□□ 1.88
SRSF1-206ENST00000583741 DUOX1Q9NRD9 1551 aa26.78■■□□□ 1.88
SRSF1-206ENST00000583741 GMPSP49915 693 aaPredicted RBP26.78■■□□□ 1.88
SRSF1-206ENST00000583741 AIMP1Q12904 312 aaKnown RBP26.78■■□□□ 1.88
SRSF1-206ENST00000583741 GRM1Q13255 1194 aa26.78■■□□□ 1.88
SRSF1-206ENST00000583741 DPP8Q6V1X1 898 aaPredicted RBP26.78■■□□□ 1.88
SRSF1-206ENST00000583741 BABAM1Q9NWV8 329 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms