RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 KIAA0100Q14667 2235 aaKnown RBP12.76□□□□□ -0.37
MKS1-212ENST00000583577 HMOX1P09601 288 aa12.75□□□□□ -0.37
MKS1-212ENST00000583577 MS4A1P11836 297 aa12.75□□□□□ -0.37
MKS1-212ENST00000583577 POLR2AP24928 1970 aaKnown RBP12.75□□□□□ -0.37
MKS1-212ENST00000583577 EIF6P56537 245 aaKnown RBP12.75□□□□□ -0.37
MKS1-212ENST00000583577 ST5P78524 1137 aa12.75□□□□□ -0.37
MKS1-212ENST00000583577 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
MKS1-212ENST00000583577 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
MKS1-212ENST00000583577 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
MKS1-212ENST00000583577 BCORQ6W2J9 1755 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 SCN7AQ01118 1682 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 DLL1O00548 723 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 TCERG1O14776 1098 aaKnown RBP12.74□□□□□ -0.37
MKS1-212ENST00000583577 IRX6P78412 446 aaPredicted RBP12.74□□□□□ -0.37
MKS1-212ENST00000583577 NOGQ13253 232 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 SYNE4Q8N205 404 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 HHIPL1Q96JK4 782 aa12.74□□□□□ -0.37
MKS1-212ENST00000583577 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
MKS1-212ENST00000583577 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
MKS1-212ENST00000583577 ANP32AP39687 249 aaKnown RBP12.73□□□□□ -0.37
MKS1-212ENST00000583577 FXR1P51114 621 aaKnown RBP eCLIP12.73□□□□□ -0.37
MKS1-212ENST00000583577 SCNN1DP51172 638 aa12.73□□□□□ -0.37
MKS1-212ENST00000583577 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
MKS1-212ENST00000583577 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
MKS1-212ENST00000583577 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
MKS1-212ENST00000583577 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
MKS1-212ENST00000583577 CTU1Q7Z7A3 348 aaKnown RBP12.73□□□□□ -0.37
MKS1-212ENST00000583577 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
MKS1-212ENST00000583577 GLIS2Q9BZE0 524 aaPredicted RBP12.73□□□□□ -0.37
MKS1-212ENST00000583577 HPS5Q9UPZ3 1129 aa12.73□□□□□ -0.37
MKS1-212ENST00000583577 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
MKS1-212ENST00000583577 A0A087WZG4 1122 aa12.72□□□□□ -0.37
MKS1-212ENST00000583577 TRPA1O75762 1119 aa12.72□□□□□ -0.37
MKS1-212ENST00000583577 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
MKS1-212ENST00000583577 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
MKS1-212ENST00000583577 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
MKS1-212ENST00000583577 CENPFP49454 3210 aa12.71□□□□□ -0.37
MKS1-212ENST00000583577 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.37
MKS1-212ENST00000583577 COL6A3P12111 3177 aa12.7□□□□□ -0.38
MKS1-212ENST00000583577 NPR1P16066 1061 aa12.7□□□□□ -0.38
MKS1-212ENST00000583577 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
MKS1-212ENST00000583577 HUNKP57058 714 aa12.7□□□□□ -0.38
MKS1-212ENST00000583577 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
MKS1-212ENST00000583577 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
MKS1-212ENST00000583577 SAGE1Q9NXZ1 904 aa12.7□□□□□ -0.38
MKS1-212ENST00000583577 COL4A5P29400 1685 aa12.7□□□□□ -0.38
MKS1-212ENST00000583577 NEFMP07197 916 aa12.69□□□□□ -0.38
MKS1-212ENST00000583577 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
MKS1-212ENST00000583577 NOP58Q9Y2X3 529 aaKnown RBP12.69□□□□□ -0.38
MKS1-212ENST00000583577 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
MKS1-212ENST00000583577 KIF23Q02241 960 aaPredicted RBP12.68□□□□□ -0.38
MKS1-212ENST00000583577 WDR43Q15061 677 aaKnown RBP eCLIP12.68□□□□□ -0.38
MKS1-212ENST00000583577 IPO9Q96P70 1041 aaKnown RBP12.68□□□□□ -0.38
MKS1-212ENST00000583577 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
MKS1-212ENST00000583577 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
MKS1-212ENST00000583577 ADARB2Q9NS39 739 aaKnown RBP12.68□□□□□ -0.38
MKS1-212ENST00000583577 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
MKS1-212ENST00000583577 UBR2Q8IWV8 1755 aa12.66□□□□□ -0.38
MKS1-212ENST00000583577 STARD3NLO95772 234 aa12.66□□□□□ -0.38
MKS1-212ENST00000583577 NBPF5PQ86XG9 351 aaPredicted RBP12.66□□□□□ -0.38
MKS1-212ENST00000583577 LARGE2Q8N3Y3 721 aa12.66□□□□□ -0.38
MKS1-212ENST00000583577 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
MKS1-212ENST00000583577 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
MKS1-212ENST00000583577 MTHFSDQ2M296 383 aaKnown RBP12.65□□□□□ -0.38
MKS1-212ENST00000583577 RGMBQ6NW40 437 aa12.65□□□□□ -0.38
MKS1-212ENST00000583577 NPM2Q86SE8 214 aaKnown RBP12.65□□□□□ -0.38
MKS1-212ENST00000583577 VSIG10Q8N0Z9 540 aa12.65□□□□□ -0.38
MKS1-212ENST00000583577 SLC17A8Q8NDX2 589 aa12.65□□□□□ -0.38
MKS1-212ENST00000583577 PSMD1Q99460 953 aa12.65□□□□□ -0.38
MKS1-212ENST00000583577 GPRC5DQ9NZD1 345 aa12.65□□□□□ -0.38
MKS1-212ENST00000583577 HDAC9Q9UKV0 1011 aa12.65□□□□□ -0.38
MKS1-212ENST00000583577 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
MKS1-212ENST00000583577 HTTP42858 3142 aa12.64□□□□□ -0.39
MKS1-212ENST00000583577 BRCA2P51587 3418 aa12.64□□□□□ -0.39
MKS1-212ENST00000583577 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
MKS1-212ENST00000583577 RANBP2P49792 3224 aaKnown RBP12.64□□□□□ -0.39
MKS1-212ENST00000583577 FAM177BA6PVY3 158 aa12.63□□□□□ -0.39
MKS1-212ENST00000583577 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
MKS1-212ENST00000583577 ALDH1B1P30837 517 aa12.63□□□□□ -0.39
MKS1-212ENST00000583577 ZNF157P51786 506 aaPredicted RBP12.63□□□□□ -0.39
MKS1-212ENST00000583577 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
MKS1-212ENST00000583577 DLK2Q6UY11 383 aa12.63□□□□□ -0.39
MKS1-212ENST00000583577 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
MKS1-212ENST00000583577 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
MKS1-212ENST00000583577 SIPA1L3O60292 1781 aaPredicted RBP12.62□□□□□ -0.39
MKS1-212ENST00000583577 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
MKS1-212ENST00000583577 USP48Q86UV5 1035 aa12.62□□□□□ -0.39
MKS1-212ENST00000583577 NIM1KQ8IY84 436 aa12.62□□□□□ -0.39
MKS1-212ENST00000583577 CCDC102AQ96A19 550 aa12.62□□□□□ -0.39
MKS1-212ENST00000583577 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
MKS1-212ENST00000583577 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
MKS1-212ENST00000583577 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
MKS1-212ENST00000583577 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
MKS1-212ENST00000583577 IL6STP40189 918 aaPredicted RBP12.61□□□□□ -0.39
MKS1-212ENST00000583577 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
MKS1-212ENST00000583577 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
MKS1-212ENST00000583577 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
MKS1-212ENST00000583577 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms