RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GBA2	Q9HCG7	927 aa	Predicted RBP	7.57	□□□□□ -1.2
MSI2-216	ENST00000582772	SRP68	Q9UHB9	627 aa	Known RBP	7.57	□□□□□ -1.2
MSI2-216	ENST00000582772	SNED1	Q8TER0	1413 aa		7.57	□□□□□ -1.2
MSI2-216	ENST00000582772	TJP1	Q07157	1748 aa		7.57	□□□□□ -1.2
MSI2-216	ENST00000582772	IRS2	Q9Y4H2	1338 aa		7.56	□□□□□ -1.2
MSI2-216	ENST00000582772	RGL3	Q3MIN7	710 aa		7.56	□□□□□ -1.2
MSI2-216	ENST00000582772	TDH	Q8IZJ6	230 aa		7.56	□□□□□ -1.2
MSI2-216	ENST00000582772	POLR2A	P24928	1970 aa	Known RBP	7.56	□□□□□ -1.2
MSI2-216	ENST00000582772	TTC21B	Q7Z4L5	1316 aa		7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	WTIP	A6NIX2	430 aa	Predicted RBP	7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	SOX12	O15370	315 aa		7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	CCDC93	Q567U6	631 aa		7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	PRPF40B	Q6NWY9	871 aa	Known RBP	7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	C2orf69	Q8N8R5	385 aa		7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	CNKSR1	Q969H4	720 aa		7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	GPRC5D	Q9NZD1	345 aa		7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	TRANK1	O15050	2925 aa		7.55	□□□□□ -1.2
MSI2-216	ENST00000582772	CDHR2	Q9BYE9	1310 aa		7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	KRT37	O76014	449 aa		7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	IARS	P41252	1262 aa	Known RBP	7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	NFIX	Q14938	502 aa		7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	SLC4A8	Q2Y0W8	1093 aa		7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	STYK1	Q6J9G0	422 aa		7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	NBPF11	Q86T75	865 aa		7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	ZNF277	Q9NRM2	450 aa	Predicted RBP	7.54	□□□□□ -1.2
MSI2-216	ENST00000582772	SERPINB2	P05120	415 aa		7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	PDE6B	P35913	854 aa		7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	MAPK8IP2	Q13387	824 aa	Predicted RBP	7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	NKX1-1	Q15270	411 aa	Predicted RBP	7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	ADAMTS19	Q8TE59	1207 aa		7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	ZNF622	Q969S3	477 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	SLC4A9	Q96Q91	983 aa		7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	CDX2	Q99626	313 aa	Predicted RBP	7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	BRIP1	Q9BX63	1249 aa		7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	ASAP1	Q9ULH1	1129 aa		7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	REV3L	O60673	3130 aa		7.53	□□□□□ -1.2
MSI2-216	ENST00000582772	CYP27B1	O15528	508 aa		7.52	□□□□□ -1.21
MSI2-216	ENST00000582772	ST18	O60284	1047 aa		7.52	□□□□□ -1.21
MSI2-216	ENST00000582772	EIF6	P56537	245 aa	Known RBP	7.52	□□□□□ -1.21
MSI2-216	ENST00000582772	NHLH1	Q02575	133 aa		7.52	□□□□□ -1.21
MSI2-216	ENST00000582772	ATXN2L	Q8WWM7	1075 aa	Known RBP	7.52	□□□□□ -1.21
MSI2-216	ENST00000582772	UHRF1	Q96T88	793 aa	Predicted RBP	7.52	□□□□□ -1.21
MSI2-216	ENST00000582772	R3HDML	Q9H3Y0	253 aa		7.52	□□□□□ -1.21
MSI2-216	ENST00000582772	SLC9C1	Q4G0N8	1177 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	TMEM31	Q5JXX7	168 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	ERMP1	Q7Z2K6	904 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	RTKN2	Q8IZC4	609 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	JDP2	Q8WYK2	163 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	IP6K1	Q92551	441 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	ERO1A	Q96HE7	468 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	GJA3	Q9Y6H8	435 aa		7.51	□□□□□ -1.21
MSI2-216	ENST00000582772	MAST4	O15021	2626 aa		7.5	□□□□□ -1.21
MSI2-216	ENST00000582772	DNAH14	Q0VDD8	3507 aa		7.5	□□□□□ -1.21
MSI2-216	ENST00000582772	GPR37L1	O60883	481 aa		7.5	□□□□□ -1.21
MSI2-216	ENST00000582772	NKX2-3	Q8TAU0	364 aa		7.5	□□□□□ -1.21
MSI2-216	ENST00000582772	PSMD1	Q99460	953 aa		7.5	□□□□□ -1.21
MSI2-216	ENST00000582772	ATG3	Q9NT62	314 aa		7.5	□□□□□ -1.21
MSI2-216	ENST00000582772	MYO15A	Q9UKN7	3530 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	RGL2	O15211	777 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	EVI5	O60447	810 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	ALDH1A1	P00352	501 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	SRGN	P10124	158 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	HIRA	P54198	1017 aa	Predicted RBP	7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	FKBP1B	P68106	108 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	FAM50A	Q14320	339 aa	Known RBP	7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	ZNF697	Q5TEC3	545 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	KCNH6	Q9H252	994 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	EFCC1	Q9HA90	598 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	TMOD3	Q9NYL9	352 aa		7.49	□□□□□ -1.21
MSI2-216	ENST00000582772	FASN	P49327	2511 aa	Known RBP	7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	SCN7A	Q01118	1682 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	ITGB8	P26012	769 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	SREBF2	Q12772	1141 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	USPL1	Q5W0Q7	1092 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	ASB2	Q96Q27	587 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	ZNF692	Q9BU19	519 aa	Predicted RBP	7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	C11orf16	Q9NQ32	467 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	DACH1	Q9UI36	760 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	GPR179	Q6PRD1	2367 aa		7.48	□□□□□ -1.21
MSI2-216	ENST00000582772	ZPR1	O75312	459 aa		7.47	□□□□□ -1.21
MSI2-216	ENST00000582772	GJA8	P48165	433 aa		7.47	□□□□□ -1.21
MSI2-216	ENST00000582772	USP48	Q86UV5	1035 aa		7.47	□□□□□ -1.21
MSI2-216	ENST00000582772	MASTL	Q96GX5	879 aa		7.47	□□□□□ -1.21
MSI2-216	ENST00000582772	CABP1	Q9NZU7	370 aa		7.47	□□□□□ -1.21
MSI2-216	ENST00000582772	KIF24	Q5T7B8	1368 aa		7.46	□□□□□ -1.21
MSI2-216	ENST00000582772	TONSL	Q96HA7	1378 aa		7.46	□□□□□ -1.21
MSI2-216	ENST00000582772	CRKL	P46109	303 aa	Known RBP	7.46	□□□□□ -1.22
MSI2-216	ENST00000582772	RAPGEF4	Q8WZA2	1011 aa		7.46	□□□□□ -1.22
MSI2-216	ENST00000582772	FAM161B	Q96MY7	647 aa		7.46	□□□□□ -1.22
MSI2-216	ENST00000582772	BCL2L12	Q9HB09	334 aa		7.46	□□□□□ -1.22
MSI2-216	ENST00000582772	NARF	Q9UHQ1	456 aa		7.46	□□□□□ -1.22
MSI2-216	ENST00000582772	RAB3GAP2	Q9H2M9	1393 aa		7.46	□□□□□ -1.22
MSI2-216	ENST00000582772	FOSL2	P15408	326 aa		7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	CAPN2	P17655	700 aa		7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	TAT	P17735	454 aa	Predicted RBP	7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	COL9A2	Q14055	689 aa	Predicted RBP	7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	KRT26	Q7Z3Y9	468 aa		7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	USP38	Q8NB14	1042 aa		7.45	□□□□□ -1.22
MSI2-216	ENST00000582772	CD99L2	Q8TCZ2	262 aa		7.45	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms