RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 SPATA31A3Q5VYP0 1347 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 A0A087WZG4 1122 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 MTX1Q13505 466 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 MPNDQ8N594 471 aa12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 DNAJC2Q99543 621 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-225ENST00000582482 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 SYCE3A1L190 88 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 GLRX3O76003 335 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 NUCB2P80303 420 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 ST3GAL1Q11201 340 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 RNF214Q8ND24 703 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 METTL22Q9BUU2 404 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 DBNDD2Q9BQY9 259 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 FSD1Q9BTV5 496 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 RBSNQ9H1K0 784 aa12.93□□□□□ -0.34
CDK5RAP3-225ENST00000582482 COL15A1P39059 1388 aa12.92□□□□□ -0.34
CDK5RAP3-225ENST00000582482 MRE11P49959 708 aa12.92□□□□□ -0.34
CDK5RAP3-225ENST00000582482 KIAA1211Q6ZU35 1233 aa12.92□□□□□ -0.34
CDK5RAP3-225ENST00000582482 DDX46Q7L014 1031 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-225ENST00000582482 TTC14Q96N46 770 aa12.92□□□□□ -0.34
CDK5RAP3-225ENST00000582482 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 PTPN12Q05209 780 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 NEXNQ0ZGT2 675 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 STK3Q13188 491 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 CUL4AQ13619 759 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 FAM173BQ6P4H8 233 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 LMBR1LQ6UX01 489 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 AOX1Q06278 1338 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 GOLGB1Q14789 3259 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 BRD1O95696 1058 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 KCNJ4P48050 445 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
CDK5RAP3-225ENST00000582482 RFX5P48382 616 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 TIMM10P62072 90 aa12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 HSP90AB3PQ58FF7 597 aa12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 A0A0G2JS52 829 aa12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-225ENST00000582482 FOSBP53539 338 aa12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 CLEC17AQ6ZS10 378 aa12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 CWC22Q9HCG8 908 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 UTYO14607 1347 aa12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 TTC41PQ6P2S7 1318 aa12.89□□□□□ -0.35
CDK5RAP3-225ENST00000582482 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 ME3Q16798 604 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 CREB3L3Q68CJ9 461 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 USP48Q86UV5 1035 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 CCDC171Q6TFL3 1326 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 GLI3P10071 1580 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 ANAPC15P60006 121 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 FAM43AQ8N2R8 423 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 TPCN1Q9ULQ1 816 aa12.88□□□□□ -0.35
CDK5RAP3-225ENST00000582482 FIBPO43427 364 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 TNNI3KQ59H18 835 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 SNRKQ9NRH2 765 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 FPGT-TNNI3KV9GXZ4 949 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 OVOS2A0A0G2JMS6 1433 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 SLC27A2O14975 620 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 SYT1P21579 422 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 CASP7P55210 303 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 EVI5LQ96CN4 794 aa12.87□□□□□ -0.35
CDK5RAP3-225ENST00000582482 GJB2P29033 226 aa12.86□□□□□ -0.35
CDK5RAP3-225ENST00000582482 FOXO4P98177 505 aa12.86□□□□□ -0.35
CDK5RAP3-225ENST00000582482 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
CDK5RAP3-225ENST00000582482 VPS37CA5D8V6 355 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-225ENST00000582482 GPTP24298 496 aa12.86□□□□□ -0.35
CDK5RAP3-225ENST00000582482 GPATCH3Q96I76 525 aa12.86□□□□□ -0.35
CDK5RAP3-225ENST00000582482 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms