RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 RARSP54136 660 aaKnown RBP20.99■□□□□ 0.95
RNF43-206ENST00000582293 NYXQ9GZU5 481 aa20.99■□□□□ 0.95
RNF43-206ENST00000582293 RIC1Q4ADV7 1423 aa20.98■□□□□ 0.95
RNF43-206ENST00000582293 KLRG2A4D1S0 409 aaPredicted RBP20.98■□□□□ 0.95
RNF43-206ENST00000582293 F6X3S4 739 aa20.98■□□□□ 0.95
RNF43-206ENST00000582293 ST5P78524 1137 aa20.98■□□□□ 0.95
RNF43-206ENST00000582293 PPP1R42Q7Z4L9 355 aa20.98■□□□□ 0.95
RNF43-206ENST00000582293 UTP14AQ9BVJ6 771 aaKnown RBP20.98■□□□□ 0.95
RNF43-206ENST00000582293 WWC3Q9ULE0 1092 aa20.98■□□□□ 0.95
RNF43-206ENST00000582293 YBX3P16989 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
RNF43-206ENST00000582293 C3orf67Q6ZVT6 689 aa20.97■□□□□ 0.95
RNF43-206ENST00000582293 DNAAF4Q8WXU2 420 aa20.97■□□□□ 0.95
RNF43-206ENST00000582293 DDX60Q8IY21 1712 aaKnown RBP20.97■□□□□ 0.95
RNF43-206ENST00000582293 CWF19L2Q2TBE0 894 aaKnown RBP20.96■□□□□ 0.95
RNF43-206ENST00000582293 SLC10A5Q5PT55 438 aa20.96■□□□□ 0.95
RNF43-206ENST00000582293 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
RNF43-206ENST00000582293 SMC4Q9NTJ3 1288 aa20.96■□□□□ 0.95
RNF43-206ENST00000582293 GOLGB1Q14789 3259 aaKnown RBP20.96■□□□□ 0.95
RNF43-206ENST00000582293 LAMB2P55268 1798 aa20.95■□□□□ 0.94
RNF43-206ENST00000582293 BRPF1P55201 1214 aaPredicted RBP20.95■□□□□ 0.94
RNF43-206ENST00000582293 TRMT112Q9UI30 125 aaKnown RBP20.95■□□□□ 0.94
RNF43-206ENST00000582293 NEURL1BA8MQ27 555 aa20.94■□□□□ 0.94
RNF43-206ENST00000582293 NPHP1O15259 732 aa20.94■□□□□ 0.94
RNF43-206ENST00000582293 SRGNP10124 158 aa20.94■□□□□ 0.94
RNF43-206ENST00000582293 PDE6BP35913 854 aa20.94■□□□□ 0.94
RNF43-206ENST00000582293 CCDC191Q8NCU4 936 aa20.94■□□□□ 0.94
RNF43-206ENST00000582293 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
RNF43-206ENST00000582293 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
RNF43-206ENST00000582293 GTF2E1P29083 439 aaPredicted RBP20.93■□□□□ 0.94
RNF43-206ENST00000582293 CRY2Q49AN0 593 aa20.93■□□□□ 0.94
RNF43-206ENST00000582293 BEND3Q5T5X7 828 aa20.93■□□□□ 0.94
RNF43-206ENST00000582293 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
RNF43-206ENST00000582293 BCAR3O75815 825 aa20.92■□□□□ 0.94
RNF43-206ENST00000582293 HCLS1P14317 486 aaPredicted RBP20.92■□□□□ 0.94
RNF43-206ENST00000582293 JARID2Q92833 1246 aaPredicted RBP20.92■□□□□ 0.94
RNF43-206ENST00000582293 CWC25Q9NXE8 425 aaPredicted RBP20.92■□□□□ 0.94
RNF43-206ENST00000582293 PTPRCP08575 1304 aa20.92■□□□□ 0.94
RNF43-206ENST00000582293 H0YIN7 160 aa20.91■□□□□ 0.94
RNF43-206ENST00000582293 RTL5Q5HYW3 569 aaPredicted RBP20.91■□□□□ 0.94
RNF43-206ENST00000582293 ZBTB38Q8NAP3 1195 aaPredicted RBP20.91■□□□□ 0.94
RNF43-206ENST00000582293 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
RNF43-206ENST00000582293 YTHDC1Q96MU7 727 aaKnown RBP20.91■□□□□ 0.94
RNF43-206ENST00000582293 PIM2Q9P1W9 311 aa20.91■□□□□ 0.94
RNF43-206ENST00000582293 NOB1Q9ULX3 412 aaKnown RBP20.91■□□□□ 0.94
RNF43-206ENST00000582293 ARFGEF1Q9Y6D6 1849 aa20.9■□□□□ 0.94
RNF43-206ENST00000582293 PCCAP05165 728 aaPredicted RBP20.9■□□□□ 0.94
RNF43-206ENST00000582293 NEXNQ0ZGT2 675 aa20.9■□□□□ 0.94
RNF43-206ENST00000582293 PDZRN3Q9UPQ7 1066 aa20.9■□□□□ 0.94
RNF43-206ENST00000582293 UTRNP46939 3433 aa20.9■□□□□ 0.94
RNF43-206ENST00000582293 CASP7P55210 303 aa20.89■□□□□ 0.93
RNF43-206ENST00000582293 GCKRQ14397 625 aa20.89■□□□□ 0.93
RNF43-206ENST00000582293 GPR162Q16538 588 aa20.89■□□□□ 0.93
RNF43-206ENST00000582293 STYK1Q6J9G0 422 aa20.89■□□□□ 0.93
RNF43-206ENST00000582293 PELP1Q8IZL8 1130 aaKnown RBP20.89■□□□□ 0.93
RNF43-206ENST00000582293 MASTLQ96GX5 879 aa20.89■□□□□ 0.93
RNF43-206ENST00000582293 COL4A1P02462 1669 aa20.89■□□□□ 0.93
RNF43-206ENST00000582293 CACNA1SQ13698 1873 aa20.88■□□□□ 0.93
RNF43-206ENST00000582293 SLX4Q8IY92 1834 aa20.88■□□□□ 0.93
RNF43-206ENST00000582293 H7C1W4 665 aa20.88■□□□□ 0.93
RNF43-206ENST00000582293 ZNF622Q969S3 477 aaKnown RBP eCLIP20.88■□□□□ 0.93
RNF43-206ENST00000582293 BCS1LQ9Y276 419 aa20.88■□□□□ 0.93
RNF43-206ENST00000582293 IRS4O14654 1257 aaPredicted RBP20.87■□□□□ 0.93
RNF43-206ENST00000582293 NPR1P16066 1061 aa20.87■□□□□ 0.93
RNF43-206ENST00000582293 HOXA10P31260 410 aaPredicted RBP20.87■□□□□ 0.93
RNF43-206ENST00000582293 SLC4A10Q6U841 1118 aa20.87■□□□□ 0.93
RNF43-206ENST00000582293 TNNQ9UQP3 1299 aa20.87■□□□□ 0.93
RNF43-206ENST00000582293 CDHR2Q9BYE9 1310 aa20.86■□□□□ 0.93
RNF43-206ENST00000582293 DALRD3Q5D0E6 543 aaKnown RBP20.86■□□□□ 0.93
RNF43-206ENST00000582293 TTLL6Q8N841 843 aa20.86■□□□□ 0.93
RNF43-206ENST00000582293 NLRP3Q96P20 1036 aa20.86■□□□□ 0.93
RNF43-206ENST00000582293 SLC51AQ86UW1 340 aa20.85■□□□□ 0.93
RNF43-206ENST00000582293 ALDH1L1O75891 902 aa20.84■□□□□ 0.93
RNF43-206ENST00000582293 SF3B3Q15393 1217 aaKnown RBP20.84■□□□□ 0.93
RNF43-206ENST00000582293 PRPF40BQ6NWY9 871 aaKnown RBP20.84■□□□□ 0.93
RNF43-206ENST00000582293 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
RNF43-206ENST00000582293 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
RNF43-206ENST00000582293 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
RNF43-206ENST00000582293 SRCIN1Q9C0H9 1055 aa20.84■□□□□ 0.93
RNF43-206ENST00000582293 TAF1P21675 1872 aa20.84■□□□□ 0.93
RNF43-206ENST00000582293 KIF16BQ96L93 1317 aa20.83■□□□□ 0.93
RNF43-206ENST00000582293 CNKSR1Q969H4 720 aa20.83■□□□□ 0.93
RNF43-206ENST00000582293 ABCC4O15439 1325 aa20.82■□□□□ 0.92
RNF43-206ENST00000582293 API5Q9BZZ5 524 aaKnown RBP20.82■□□□□ 0.92
RNF43-206ENST00000582293 SNED1Q8TER0 1413 aa20.81■□□□□ 0.92
RNF43-206ENST00000582293 PDE8AO60658 829 aa20.81■□□□□ 0.92
RNF43-206ENST00000582293 TRIM27P14373 513 aa20.81■□□□□ 0.92
RNF43-206ENST00000582293 RPGRQ92834 1020 aaKnown RBP20.81■□□□□ 0.92
RNF43-206ENST00000582293 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
RNF43-206ENST00000582293 UTYO14607 1347 aa20.8■□□□□ 0.92
RNF43-206ENST00000582293 GRIN3BO60391 1043 aa20.8■□□□□ 0.92
RNF43-206ENST00000582293 OLFM4Q6UX06 510 aa20.8■□□□□ 0.92
RNF43-206ENST00000582293 ATF7IPQ6VMQ6 1270 aa20.8■□□□□ 0.92
RNF43-206ENST00000582293 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
RNF43-206ENST00000582293 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
RNF43-206ENST00000582293 MYH3P11055 1940 aa20.79■□□□□ 0.92
RNF43-206ENST00000582293 GRM8O00222 908 aa20.79■□□□□ 0.92
RNF43-206ENST00000582293 C21orf2O43822 256 aa20.79■□□□□ 0.92
RNF43-206ENST00000582293 NBPF7P0C2Y1 421 aaPredicted RBP20.79■□□□□ 0.92
RNF43-206ENST00000582293 RBM17Q96I25 401 aaKnown RBP20.79■□□□□ 0.92
RNF43-206ENST00000582293 KAZALD1Q96I82 304 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms