RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 ABHD8Q96I13 439 aa8.22□□□□□ -1.09
CDK12-207ENST00000581963 PSMD1Q99460 953 aa8.22□□□□□ -1.09
CDK12-207ENST00000581963 SCNN1DP51172 638 aa8.21□□□□□ -1.1
CDK12-207ENST00000581963 NUTM1Q86Y26 1132 aa8.21□□□□□ -1.1
CDK12-207ENST00000581963 DDX21Q9NR30 783 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDK12-207ENST00000581963 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.1
CDK12-207ENST00000581963 HOXA10P31260 410 aaPredicted RBP8.2□□□□□ -1.1
CDK12-207ENST00000581963 EPS15P42566 896 aa8.2□□□□□ -1.1
CDK12-207ENST00000581963 MAP2K1Q02750 393 aaPredicted RBP8.2□□□□□ -1.1
CDK12-207ENST00000581963 CCER1Q8TC90 406 aaPredicted RBP8.2□□□□□ -1.1
CDK12-207ENST00000581963 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
CDK12-207ENST00000581963 RTF1Q92541 710 aaKnown RBP8.2□□□□□ -1.1
CDK12-207ENST00000581963 ABT1Q9ULW3 272 aaKnown RBP8.2□□□□□ -1.1
CDK12-207ENST00000581963 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
CDK12-207ENST00000581963 UBN2Q6ZU65 1347 aa8.2□□□□□ -1.1
CDK12-207ENST00000581963 LRRC37AA6NMS7 1700 aa8.2□□□□□ -1.1
CDK12-207ENST00000581963 TNRC18O15417 2968 aaPredicted RBP8.19□□□□□ -1.1
CDK12-207ENST00000581963 SLC34A2O95436 690 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
CDK12-207ENST00000581963 GTF2E1P29083 439 aaPredicted RBP8.19□□□□□ -1.1
CDK12-207ENST00000581963 EIF6P56537 245 aaKnown RBP8.19□□□□□ -1.1
CDK12-207ENST00000581963 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDK12-207ENST00000581963 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 CC2D2BQ6DHV5 1058 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 C3orf67Q6ZVT6 689 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 CAPNS2Q96L46 248 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 CFAP53Q96M91 514 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 NYXQ9GZU5 481 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 MIS18AQ9NYP9 233 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 DDX60Q8IY21 1712 aaKnown RBP8.19□□□□□ -1.1
CDK12-207ENST00000581963 MAP3K15Q6ZN16 1313 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 AKAP11Q9UKA4 1901 aa8.19□□□□□ -1.1
CDK12-207ENST00000581963 ERVV-1B6SEH8 477 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 TRAF5O00463 557 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 HTATSF1O43719 755 aaKnown RBP8.18□□□□□ -1.1
CDK12-207ENST00000581963 GPTP24298 496 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
CDK12-207ENST00000581963 TAF7Q15545 349 aaPredicted RBP8.18□□□□□ -1.1
CDK12-207ENST00000581963 CST9Q5W186 159 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 CYP4F22Q6NT55 531 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 NGEFQ8N5V2 710 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 RPGRQ92834 1020 aaKnown RBP8.18□□□□□ -1.1
CDK12-207ENST00000581963 NUDCQ9Y266 331 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 DUOX1Q9NRD9 1551 aa8.18□□□□□ -1.1
CDK12-207ENST00000581963 TCERG1O14776 1098 aaKnown RBP8.17□□□□□ -1.1
CDK12-207ENST00000581963 PPEF1O14829 653 aaPredicted RBP8.17□□□□□ -1.1
CDK12-207ENST00000581963 NTSR2O95665 410 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 PPP2R1AP30153 589 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 GRM1Q13255 1194 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 SUSD4Q5VX71 490 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 PAXIP1Q6ZW49 1069 aaPredicted RBP8.17□□□□□ -1.1
CDK12-207ENST00000581963 USP50Q70EL3 339 aaPredicted RBP8.17□□□□□ -1.1
CDK12-207ENST00000581963 ZNF34Q8IZ26 560 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 GPR101Q96P66 508 aaPredicted RBP8.17□□□□□ -1.1
CDK12-207ENST00000581963 CRAMP1Q96RY5 1269 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 ZBTB3Q9H5J0 574 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
CDK12-207ENST00000581963 PPIP5K2O43314 1243 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 AOC2O75106 756 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 MYL6BP14649 208 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 ECE1P42892 770 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 EIF4A1P60842 406 aaKnown RBP8.16□□□□□ -1.1
CDK12-207ENST00000581963 PSME4Q14997 1843 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 SCN9AQ15858 1988 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 AOC3Q16853 763 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 GRIPAP1Q4V328 841 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 KIF6Q6ZMV9 814 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 NIM1KQ8IY84 436 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 RBM17Q96I25 401 aaKnown RBP8.16□□□□□ -1.1
CDK12-207ENST00000581963 GPRC5DQ9NZD1 345 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 TSKSQ9UJT2 592 aa8.16□□□□□ -1.1
CDK12-207ENST00000581963 RRP7AQ9Y3A4 280 aaKnown RBP8.16□□□□□ -1.1
CDK12-207ENST00000581963 COL4A1P02462 1669 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 ABCC4O15439 1325 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 CCDC85CA6NKD9 419 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 RGS19P49795 217 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 CXCL9Q07325 125 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 GIGYF2Q6Y7W6 1299 aaKnown RBP8.15□□□□□ -1.1
CDK12-207ENST00000581963 LRP10Q7Z4F1 713 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 SAPCD2Q86UD0 394 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 THUMPD2Q9BTF0 503 aaKnown RBP8.15□□□□□ -1.1
CDK12-207ENST00000581963 BEGAINQ9BUH8 593 aa8.15□□□□□ -1.1
CDK12-207ENST00000581963 GLIS2Q9BZE0 524 aaPredicted RBP8.15□□□□□ -1.1
CDK12-207ENST00000581963 ADARB2Q9NS39 739 aaKnown RBP8.15□□□□□ -1.1
CDK12-207ENST00000581963 ERBB4Q15303 1308 aa8.14□□□□□ -1.11
CDK12-207ENST00000581963 CELF2O95319 508 aaKnown RBP8.14□□□□□ -1.11
CDK12-207ENST00000581963 MAP2K2P36507 400 aa8.14□□□□□ -1.11
CDK12-207ENST00000581963 GMPSP49915 693 aaPredicted RBP8.14□□□□□ -1.11
CDK12-207ENST00000581963 MLLT1Q03111 559 aaPredicted RBP8.14□□□□□ -1.11
CDK12-207ENST00000581963 PNISRQ8TF01 805 aaKnown RBP8.14□□□□□ -1.11
CDK12-207ENST00000581963 RTFDC1Q9BY42 306 aaPredicted RBP8.14□□□□□ -1.11
CDK12-207ENST00000581963 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
CDK12-207ENST00000581963 ATP6V0A2Q9Y487 856 aa8.14□□□□□ -1.11
CDK12-207ENST00000581963 CDHR2Q9BYE9 1310 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 SHTN1A0MZ66 631 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 HIRAP54198 1017 aaPredicted RBP8.13□□□□□ -1.11
CDK12-207ENST00000581963 KIAA2012Q0VF49 1180 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 PDIA6Q15084 440 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms