RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 PPP1R42Q7Z4L9 355 aa19.18■□□□□ 0.66
MKS1-210ENST00000581180 FRAT1Q92837 279 aaPredicted RBP19.18■□□□□ 0.66
MKS1-210ENST00000581180 NYXQ9GZU5 481 aa19.18■□□□□ 0.66
MKS1-210ENST00000581180 TNNQ9UQP3 1299 aa19.18■□□□□ 0.66
MKS1-210ENST00000581180 LAMB2P55268 1798 aa19.17■□□□□ 0.66
MKS1-210ENST00000581180 SLC4A10Q6U841 1118 aa19.17■□□□□ 0.66
MKS1-210ENST00000581180 TPTE2Q6XPS3 522 aa19.17■□□□□ 0.66
MKS1-210ENST00000581180 CNBD1Q8NA66 436 aa19.17■□□□□ 0.66
MKS1-210ENST00000581180 UTP14AQ9BVJ6 771 aaKnown RBP19.17■□□□□ 0.66
MKS1-210ENST00000581180 CWC25Q9NXE8 425 aaPredicted RBP19.17■□□□□ 0.66
MKS1-210ENST00000581180 ABCC4O15439 1325 aa19.17■□□□□ 0.66
MKS1-210ENST00000581180 MYH3P11055 1940 aa19.16■□□□□ 0.66
MKS1-210ENST00000581180 ALDH1L1O75891 902 aa19.16■□□□□ 0.66
MKS1-210ENST00000581180 RNF123Q5XPI4 1314 aa19.16■□□□□ 0.66
MKS1-210ENST00000581180 TNRC6CQ9HCJ0 1690 aaKnown RBP19.15■□□□□ 0.66
MKS1-210ENST00000581180 GCKRQ14397 625 aa19.15■□□□□ 0.66
MKS1-210ENST00000581180 NUTM1Q86Y26 1132 aa19.15■□□□□ 0.66
MKS1-210ENST00000581180 SRCIN1Q9C0H9 1055 aa19.15■□□□□ 0.66
MKS1-210ENST00000581180 TRMT112Q9UI30 125 aaKnown RBP19.15■□□□□ 0.66
MKS1-210ENST00000581180 ABCC12Q96J65 1359 aa19.15■□□□□ 0.66
MKS1-210ENST00000581180 PCCAP05165 728 aaPredicted RBP19.14■□□□□ 0.65
MKS1-210ENST00000581180 ERFEQ4G0M1 354 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 SYNE4Q8N205 404 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 CCDC24Q8N4L8 307 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 ZBTB38Q8NAP3 1195 aaPredicted RBP19.14■□□□□ 0.65
MKS1-210ENST00000581180 CD2APQ9Y5K6 639 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 SH3TC1Q8TE82 1336 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 RIC1Q4ADV7 1423 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 DLEC1Q9Y238 1755 aa19.14■□□□□ 0.65
MKS1-210ENST00000581180 BRCA1P38398 1863 aaKnown RBP19.14■□□□□ 0.65
MKS1-210ENST00000581180 H7C1W4 665 aa19.13■□□□□ 0.65
MKS1-210ENST00000581180 ST5P78524 1137 aa19.13■□□□□ 0.65
MKS1-210ENST00000581180 INTS3Q68E01 1043 aaKnown RBP19.13■□□□□ 0.65
MKS1-210ENST00000581180 FAM89AQ96GI7 184 aa19.13■□□□□ 0.65
MKS1-210ENST00000581180 PPP1R1BQ9UD71 204 aaPredicted RBP19.13■□□□□ 0.65
MKS1-210ENST00000581180 COL11A2P13942 1736 aaPredicted RBP19.13■□□□□ 0.65
MKS1-210ENST00000581180 CCT4P50991 539 aaKnown RBP19.12■□□□□ 0.65
MKS1-210ENST00000581180 CASP7P55210 303 aa19.12■□□□□ 0.65
MKS1-210ENST00000581180 CLUAP1Q96AJ1 413 aa19.12■□□□□ 0.65
MKS1-210ENST00000581180 BRIP1Q9BX63 1249 aa19.12■□□□□ 0.65
MKS1-210ENST00000581180 FHDC1Q9C0D6 1143 aaPredicted RBP19.12■□□□□ 0.65
MKS1-210ENST00000581180 SRCAPQ6ZRS2 3230 aa19.12■□□□□ 0.65
MKS1-210ENST00000581180 CDHR2Q9BYE9 1310 aa19.11■□□□□ 0.65
MKS1-210ENST00000581180 PLIN1O60240 522 aa19.11■□□□□ 0.65
MKS1-210ENST00000581180 RLBP1P12271 317 aa19.11■□□□□ 0.65
MKS1-210ENST00000581180 GTF2E1P29083 439 aaPredicted RBP19.11■□□□□ 0.65
MKS1-210ENST00000581180 DZIP1LQ8IYY4 767 aaKnown RBP19.11■□□□□ 0.65
MKS1-210ENST00000581180 KLRG2A4D1S0 409 aaPredicted RBP19.1■□□□□ 0.65
MKS1-210ENST00000581180 NPHP1O15259 732 aa19.1■□□□□ 0.65
MKS1-210ENST00000581180 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
MKS1-210ENST00000581180 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
MKS1-210ENST00000581180 UTYO14607 1347 aa19.09■□□□□ 0.65
MKS1-210ENST00000581180 GRM8O00222 908 aa19.09■□□□□ 0.65
MKS1-210ENST00000581180 HCLS1P14317 486 aaPredicted RBP19.09■□□□□ 0.65
MKS1-210ENST00000581180 TGFB2P61812 414 aa19.09■□□□□ 0.65
MKS1-210ENST00000581180 TMEM57Q8N5G2 664 aa19.09■□□□□ 0.65
MKS1-210ENST00000581180 SYT17Q9BSW7 474 aa19.09■□□□□ 0.65
MKS1-210ENST00000581180 USP44Q9H0E7 712 aa19.09■□□□□ 0.65
MKS1-210ENST00000581180 TAF1P21675 1872 aa19.08■□□□□ 0.65
MKS1-210ENST00000581180 CACNA1SQ13698 1873 aa19.08■□□□□ 0.65
MKS1-210ENST00000581180 IRS4O14654 1257 aaPredicted RBP19.08■□□□□ 0.64
MKS1-210ENST00000581180 C3orf67Q6ZVT6 689 aa19.08■□□□□ 0.64
MKS1-210ENST00000581180 UBE3BQ7Z3V4 1068 aa19.08■□□□□ 0.64
MKS1-210ENST00000581180 KLHL34Q8N239 644 aa19.08■□□□□ 0.64
MKS1-210ENST00000581180 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.08■□□□□ 0.64
MKS1-210ENST00000581180 MS4A1P11836 297 aa19.07■□□□□ 0.64
MKS1-210ENST00000581180 PDE6BP35913 854 aa19.07■□□□□ 0.64
MKS1-210ENST00000581180 RRP1P56182 461 aaKnown RBP19.07■□□□□ 0.64
MKS1-210ENST00000581180 FTSJ3Q8IY81 847 aaKnown RBP19.07■□□□□ 0.64
MKS1-210ENST00000581180 NLGN2Q8NFZ4 835 aa19.07■□□□□ 0.64
MKS1-210ENST00000581180 PANK1Q8TE04 598 aa19.07■□□□□ 0.64
MKS1-210ENST00000581180 PLA2G12BQ9BX93 195 aa19.07■□□□□ 0.64
MKS1-210ENST00000581180 C9orf78Q9NZ63 289 aaPredicted RBP19.07■□□□□ 0.64
MKS1-210ENST00000581180 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
MKS1-210ENST00000581180 NBPF7P0C2Y1 421 aaPredicted RBP19.06■□□□□ 0.64
MKS1-210ENST00000581180 KCNA3P22001 575 aa19.06■□□□□ 0.64
MKS1-210ENST00000581180 PDE3AQ14432 1141 aa19.06■□□□□ 0.64
MKS1-210ENST00000581180 CRY2Q49AN0 593 aa19.06■□□□□ 0.64
MKS1-210ENST00000581180 NLRP3Q96P20 1036 aa19.06■□□□□ 0.64
MKS1-210ENST00000581180 PDE8AO60658 829 aa19.05■□□□□ 0.64
MKS1-210ENST00000581180 DPEP1P16444 411 aa19.05■□□□□ 0.64
MKS1-210ENST00000581180 CHRNA5P30532 468 aa19.05■□□□□ 0.64
MKS1-210ENST00000581180 C20orf194Q5TEA3 1177 aa19.05■□□□□ 0.64
MKS1-210ENST00000581180 C2CD5Q86YS7 1000 aa19.05■□□□□ 0.64
MKS1-210ENST00000581180 A0A0G2JLW4 131 aa19.04■□□□□ 0.64
MKS1-210ENST00000581180 SRGNP10124 158 aa19.04■□□□□ 0.64
MKS1-210ENST00000581180 HSP90B1P14625 803 aaKnown RBP19.04■□□□□ 0.64
MKS1-210ENST00000581180 SF3B3Q15393 1217 aaKnown RBP19.04■□□□□ 0.64
MKS1-210ENST00000581180 KAZALD1Q96I82 304 aa19.04■□□□□ 0.64
MKS1-210ENST00000581180 SLX4Q8IY92 1834 aa19.03■□□□□ 0.64
MKS1-210ENST00000581180 H0YIN7 160 aa19.03■□□□□ 0.64
MKS1-210ENST00000581180 SUCLG2Q96I99 432 aa19.03■□□□□ 0.64
MKS1-210ENST00000581180 MEIS3Q99687 375 aa19.03■□□□□ 0.64
MKS1-210ENST00000581180 ARFGEF1Q9Y6D6 1849 aa19.02■□□□□ 0.64
MKS1-210ENST00000581180 HOXA10P31260 410 aaPredicted RBP19.02■□□□□ 0.64
MKS1-210ENST00000581180 EPHA10Q5JZY3 1008 aa19.02■□□□□ 0.64
MKS1-210ENST00000581180 ITPRIPQ8IWB1 547 aa19.02■□□□□ 0.64
MKS1-210ENST00000581180 MASTLQ96GX5 879 aa19.02■□□□□ 0.64
MKS1-210ENST00000581180 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms