RNA–Protein interactions for RNA: ENST00000580934.1

SPECC1-214, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-214ENST00000580934 CREBZFQ9NS37 354 aa18.77■□□□□ 0.6
SPECC1-214ENST00000580934 RCAN3Q9UKA8 241 aa18.77■□□□□ 0.6
SPECC1-214ENST00000580934 CACNA1SQ13698 1873 aa18.76■□□□□ 0.59
SPECC1-214ENST00000580934 ELL2O00472 640 aaPredicted RBP18.76■□□□□ 0.59
SPECC1-214ENST00000580934 POTEIP0CG38 1075 aa18.76■□□□□ 0.59
SPECC1-214ENST00000580934 POTEJP0CG39 1038 aa18.76■□□□□ 0.59
SPECC1-214ENST00000580934 DZIP3Q86Y13 1208 aaKnown RBP18.76■□□□□ 0.59
SPECC1-214ENST00000580934 SNRPA1P09661 255 aaKnown RBP18.75■□□□□ 0.59
SPECC1-214ENST00000580934 ALDH1L2Q3SY69 923 aa18.75■□□□□ 0.59
SPECC1-214ENST00000580934 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
SPECC1-214ENST00000580934 KLRG2A4D1S0 409 aaPredicted RBP18.74■□□□□ 0.59
SPECC1-214ENST00000580934 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
SPECC1-214ENST00000580934 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
SPECC1-214ENST00000580934 L3MBTL3Q96JM7 780 aaPredicted RBP18.74■□□□□ 0.59
SPECC1-214ENST00000580934 CHMP4AQ9BY43 222 aa18.74■□□□□ 0.59
SPECC1-214ENST00000580934 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
SPECC1-214ENST00000580934 PASKQ96RG2 1323 aa18.73■□□□□ 0.59
SPECC1-214ENST00000580934 SCN4AP35499 1836 aa18.72■□□□□ 0.59
SPECC1-214ENST00000580934 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
SPECC1-214ENST00000580934 RGL2O15211 777 aa18.72■□□□□ 0.59
SPECC1-214ENST00000580934 NPHP1O15259 732 aa18.72■□□□□ 0.59
SPECC1-214ENST00000580934 PIP4K2AP48426 406 aaPredicted RBP18.72■□□□□ 0.59
SPECC1-214ENST00000580934 HDGFL1Q5TGJ6 251 aa18.72■□□□□ 0.59
SPECC1-214ENST00000580934 MKRN1Q9UHC7 482 aaKnown RBP18.72■□□□□ 0.59
SPECC1-214ENST00000580934 IQCA1LA6NCM1 817 aa18.71■□□□□ 0.59
SPECC1-214ENST00000580934 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
SPECC1-214ENST00000580934 CCDC30Q5VVM6 783 aa18.71■□□□□ 0.59
SPECC1-214ENST00000580934 LDHDQ86WU2 507 aa18.71■□□□□ 0.59
SPECC1-214ENST00000580934 NBPF5PQ86XG9 351 aaPredicted RBP18.71■□□□□ 0.59
SPECC1-214ENST00000580934 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
SPECC1-214ENST00000580934 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
SPECC1-214ENST00000580934 NPR1P16066 1061 aa18.7■□□□□ 0.58
SPECC1-214ENST00000580934 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
SPECC1-214ENST00000580934 SSH1Q8WYL5 1049 aa18.7■□□□□ 0.58
SPECC1-214ENST00000580934 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
SPECC1-214ENST00000580934 NBPF26B4DH59 902 aa18.69■□□□□ 0.58
SPECC1-214ENST00000580934 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPECC1-214ENST00000580934 NBPF10Q6P3W6 841 aaKnown RBP18.69■□□□□ 0.58
SPECC1-214ENST00000580934 NBPF15Q8N660 670 aa18.69■□□□□ 0.58
SPECC1-214ENST00000580934 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
SPECC1-214ENST00000580934 ERBB4Q15303 1308 aa18.69■□□□□ 0.58
SPECC1-214ENST00000580934 EIF2S2P20042 333 aaKnown RBP18.68■□□□□ 0.58
SPECC1-214ENST00000580934 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
SPECC1-214ENST00000580934 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
SPECC1-214ENST00000580934 ZNF541Q9H0D2 1346 aa18.68■□□□□ 0.58
SPECC1-214ENST00000580934 ADAMTSL1Q8N6G6 1762 aa18.68■□□□□ 0.58
SPECC1-214ENST00000580934 BCAR3O75815 825 aa18.67■□□□□ 0.58
SPECC1-214ENST00000580934 ITGBL1O95965 494 aaPredicted RBP18.67■□□□□ 0.58
SPECC1-214ENST00000580934 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
SPECC1-214ENST00000580934 MRPL50Q8N5N7 158 aaKnown RBP18.67■□□□□ 0.58
SPECC1-214ENST00000580934 BCL2L13Q9BXK5 485 aa18.67■□□□□ 0.58
SPECC1-214ENST00000580934 ZNF277Q9NRM2 450 aaPredicted RBP18.67■□□□□ 0.58
SPECC1-214ENST00000580934 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
SPECC1-214ENST00000580934 SNED1Q8TER0 1413 aa18.66■□□□□ 0.58
SPECC1-214ENST00000580934 OLFM4Q6UX06 510 aa18.66■□□□□ 0.58
SPECC1-214ENST00000580934 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
SPECC1-214ENST00000580934 NIP7Q9Y221 180 aaKnown RBP eCLIP18.66■□□□□ 0.58
SPECC1-214ENST00000580934 FOXN1O15353 648 aa18.65■□□□□ 0.58
SPECC1-214ENST00000580934 NECTIN2Q92692 538 aa18.65■□□□□ 0.58
SPECC1-214ENST00000580934 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
SPECC1-214ENST00000580934 DBF4Q9UBU7 674 aaPredicted RBP18.65■□□□□ 0.58
SPECC1-214ENST00000580934 TMEM88BA6NKF7 163 aa18.64■□□□□ 0.57
SPECC1-214ENST00000580934 FZD9O00144 591 aa18.64■□□□□ 0.57
SPECC1-214ENST00000580934 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
SPECC1-214ENST00000580934 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
SPECC1-214ENST00000580934 HLFQ16534 295 aa18.64■□□□□ 0.57
SPECC1-214ENST00000580934 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPECC1-214ENST00000580934 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
SPECC1-214ENST00000580934 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
SPECC1-214ENST00000580934 ALDH1B1P30837 517 aa18.63■□□□□ 0.57
SPECC1-214ENST00000580934 VEGFBP49765 207 aa18.63■□□□□ 0.57
SPECC1-214ENST00000580934 PDIA6Q15084 440 aa18.63■□□□□ 0.57
SPECC1-214ENST00000580934 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.63■□□□□ 0.57
SPECC1-214ENST00000580934 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
SPECC1-214ENST00000580934 HACL1Q9UJ83 578 aa18.63■□□□□ 0.57
SPECC1-214ENST00000580934 EPHX2P34913 555 aa18.62■□□□□ 0.57
SPECC1-214ENST00000580934 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
SPECC1-214ENST00000580934 CRY2Q49AN0 593 aa18.62■□□□□ 0.57
SPECC1-214ENST00000580934 SYNE4Q8N205 404 aa18.62■□□□□ 0.57
SPECC1-214ENST00000580934 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
SPECC1-214ENST00000580934 PTPRCP08575 1304 aa18.61■□□□□ 0.57
SPECC1-214ENST00000580934 EAPPQ56P03 285 aaPredicted RBP18.61■□□□□ 0.57
SPECC1-214ENST00000580934 PSMD1Q99460 953 aa18.61■□□□□ 0.57
SPECC1-214ENST00000580934 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
SPECC1-214ENST00000580934 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
SPECC1-214ENST00000580934 PROSER3Q2NL68 480 aa18.6■□□□□ 0.57
SPECC1-214ENST00000580934 LRP10Q7Z4F1 713 aa18.6■□□□□ 0.57
SPECC1-214ENST00000580934 PNMA8AQ86V59 439 aaPredicted RBP18.6■□□□□ 0.57
SPECC1-214ENST00000580934 GPC2Q8N158 579 aa18.6■□□□□ 0.57
SPECC1-214ENST00000580934 ARHGAP45Q92619 1136 aa18.6■□□□□ 0.57
SPECC1-214ENST00000580934 WBP1LQ9NX94 342 aa18.6■□□□□ 0.57
SPECC1-214ENST00000580934 RASSF10A6NK89 507 aa18.59■□□□□ 0.57
SPECC1-214ENST00000580934 IPO8O15397 1037 aaKnown RBP18.59■□□□□ 0.57
SPECC1-214ENST00000580934 ANXA1P04083 346 aa18.59■□□□□ 0.57
SPECC1-214ENST00000580934 CTCFP49711 727 aaPredicted RBP18.59■□□□□ 0.57
SPECC1-214ENST00000580934 FLIIQ13045 1269 aa18.59■□□□□ 0.57
SPECC1-214ENST00000580934 ZKSCAN2Q63HK3 967 aa18.59■□□□□ 0.57
SPECC1-214ENST00000580934 NOB1Q9ULX3 412 aaKnown RBP18.59■□□□□ 0.57
SPECC1-214ENST00000580934 ANKRD36CQ5JPF3 1778 aa18.59■□□□□ 0.57
SPECC1-214ENST00000580934 RIC1Q4ADV7 1423 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms