RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
NCOR1-220ENST00000580617 DDX60Q8IY21 1712 aaKnown RBP13.56□□□□□ -0.24
NCOR1-220ENST00000580617 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
NCOR1-220ENST00000580617 TAF1P21675 1872 aa13.55□□□□□ -0.24
NCOR1-220ENST00000580617 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
NCOR1-220ENST00000580617 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
NCOR1-220ENST00000580617 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
NCOR1-220ENST00000580617 WDR90Q96KV7 1748 aa13.54□□□□□ -0.24
NCOR1-220ENST00000580617 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
NCOR1-220ENST00000580617 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
NCOR1-220ENST00000580617 C3orf67Q6ZVT6 689 aa13.54□□□□□ -0.24
NCOR1-220ENST00000580617 UTP14AQ9BVJ6 771 aaKnown RBP13.54□□□□□ -0.24
NCOR1-220ENST00000580617 RRAGCQ9HB90 399 aa13.54□□□□□ -0.24
NCOR1-220ENST00000580617 DBF4Q9UBU7 674 aaPredicted RBP13.54□□□□□ -0.24
NCOR1-220ENST00000580617 SNED1Q8TER0 1413 aa13.53□□□□□ -0.24
NCOR1-220ENST00000580617 GLTPD2A6NH11 291 aa13.53□□□□□ -0.24
NCOR1-220ENST00000580617 TOMM70O94826 608 aa13.53□□□□□ -0.24
NCOR1-220ENST00000580617 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
NCOR1-220ENST00000580617 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
NCOR1-220ENST00000580617 NLRP10Q86W26 655 aa13.53□□□□□ -0.24
NCOR1-220ENST00000580617 RPGRQ92834 1020 aaKnown RBP13.53□□□□□ -0.24
NCOR1-220ENST00000580617 ELL2O00472 640 aaPredicted RBP13.52□□□□□ -0.25
NCOR1-220ENST00000580617 HSPA6P17066 643 aa13.52□□□□□ -0.25
NCOR1-220ENST00000580617 HOXA10P31260 410 aaPredicted RBP13.52□□□□□ -0.25
NCOR1-220ENST00000580617 C8orf58Q8NAV2 365 aa13.52□□□□□ -0.25
NCOR1-220ENST00000580617 PLBD2Q8NHP8 589 aa13.52□□□□□ -0.25
NCOR1-220ENST00000580617 HYPKQ9NX55 129 aa13.52□□□□□ -0.25
NCOR1-220ENST00000580617 FKBP4Q02790 459 aaKnown RBP eCLIP13.51□□□□□ -0.25
NCOR1-220ENST00000580617 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
NCOR1-220ENST00000580617 SLC10A5Q5PT55 438 aa13.51□□□□□ -0.25
NCOR1-220ENST00000580617 ANKRD13DQ6ZTN6 518 aa13.51□□□□□ -0.25
NCOR1-220ENST00000580617 WWC1Q8IX03 1113 aa13.51□□□□□ -0.25
NCOR1-220ENST00000580617 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
NCOR1-220ENST00000580617 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
NCOR1-220ENST00000580617 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
NCOR1-220ENST00000580617 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
NCOR1-220ENST00000580617 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
NCOR1-220ENST00000580617 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
NCOR1-220ENST00000580617 TSR2Q969E8 191 aaKnown RBP13.5□□□□□ -0.25
NCOR1-220ENST00000580617 ZNF428Q96B54 188 aa13.5□□□□□ -0.25
NCOR1-220ENST00000580617 RBM17Q96I25 401 aaKnown RBP13.5□□□□□ -0.25
NCOR1-220ENST00000580617 NLRP3Q96P20 1036 aa13.5□□□□□ -0.25
NCOR1-220ENST00000580617 ZNF277Q9NRM2 450 aaPredicted RBP13.5□□□□□ -0.25
NCOR1-220ENST00000580617 CACNA1FO60840 1977 aa13.5□□□□□ -0.25
NCOR1-220ENST00000580617 SCN4AP35499 1836 aa13.49□□□□□ -0.25
NCOR1-220ENST00000580617 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
NCOR1-220ENST00000580617 CRAMP1Q96RY5 1269 aa13.49□□□□□ -0.25
NCOR1-220ENST00000580617 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
NCOR1-220ENST00000580617 PHAXQ9H814 394 aaKnown RBP13.49□□□□□ -0.25
NCOR1-220ENST00000580617 TRMT112Q9UI30 125 aaKnown RBP13.49□□□□□ -0.25
NCOR1-220ENST00000580617 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
NCOR1-220ENST00000580617 COL4A5P29400 1685 aa13.49□□□□□ -0.25
NCOR1-220ENST00000580617 POTECB2RU33 542 aa13.48□□□□□ -0.25
NCOR1-220ENST00000580617 ATP5J2-PTCD1G3V325 749 aa13.48□□□□□ -0.25
NCOR1-220ENST00000580617 HCLS1P14317 486 aaPredicted RBP13.48□□□□□ -0.25
NCOR1-220ENST00000580617 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
NCOR1-220ENST00000580617 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
NCOR1-220ENST00000580617 ABCC4O15439 1325 aa13.47□□□□□ -0.25
NCOR1-220ENST00000580617 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
NCOR1-220ENST00000580617 PPEF1O14829 653 aaPredicted RBP13.47□□□□□ -0.25
NCOR1-220ENST00000580617 VEGFAP15692 232 aaPredicted RBP13.47□□□□□ -0.25
NCOR1-220ENST00000580617 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
NCOR1-220ENST00000580617 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
NCOR1-220ENST00000580617 DDNO94850 711 aaPredicted RBP13.46□□□□□ -0.25
NCOR1-220ENST00000580617 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
NCOR1-220ENST00000580617 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
NCOR1-220ENST00000580617 PSMD1Q99460 953 aa13.46□□□□□ -0.25
NCOR1-220ENST00000580617 COL4A1P02462 1669 aa13.46□□□□□ -0.25
NCOR1-220ENST00000580617 IL16Q14005 1332 aa13.46□□□□□ -0.26
NCOR1-220ENST00000580617 ZNF541Q9H0D2 1346 aa13.46□□□□□ -0.26
NCOR1-220ENST00000580617 FSTL1Q12841 308 aa13.45□□□□□ -0.26
NCOR1-220ENST00000580617 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
NCOR1-220ENST00000580617 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
NCOR1-220ENST00000580617 FAM89AQ96GI7 184 aa13.45□□□□□ -0.26
NCOR1-220ENST00000580617 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
NCOR1-220ENST00000580617 MYH3P11055 1940 aa13.45□□□□□ -0.26
NCOR1-220ENST00000580617 TRIM28Q13263 835 aaKnown RBP13.45□□□□□ -0.26
NCOR1-220ENST00000580617 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
NCOR1-220ENST00000580617 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
NCOR1-220ENST00000580617 FANCIQ9NVI1 1328 aa13.44□□□□□ -0.26
NCOR1-220ENST00000580617 APLP1P51693 650 aa13.44□□□□□ -0.26
NCOR1-220ENST00000580617 TWISTNBQ3B726 338 aaPredicted RBP13.44□□□□□ -0.26
NCOR1-220ENST00000580617 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
NCOR1-220ENST00000580617 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
NCOR1-220ENST00000580617 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
NCOR1-220ENST00000580617 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
NCOR1-220ENST00000580617 MYD88Q99836 296 aa13.44□□□□□ -0.26
NCOR1-220ENST00000580617 DUOX1Q9NRD9 1551 aa13.43□□□□□ -0.26
NCOR1-220ENST00000580617 FZD9O00144 591 aa13.43□□□□□ -0.26
NCOR1-220ENST00000580617 GRAPQ13588 217 aa13.43□□□□□ -0.26
NCOR1-220ENST00000580617 GRAPLQ8TC17 118 aaPredicted RBP13.43□□□□□ -0.26
NCOR1-220ENST00000580617 CHMP4AQ9BY43 222 aa13.43□□□□□ -0.26
NCOR1-220ENST00000580617 ADAMTSL1Q8N6G6 1762 aa13.42□□□□□ -0.26
NCOR1-220ENST00000580617 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
NCOR1-220ENST00000580617 IRS4O14654 1257 aaPredicted RBP13.42□□□□□ -0.26
NCOR1-220ENST00000580617 BBOX1O75936 387 aa13.42□□□□□ -0.26
NCOR1-220ENST00000580617 DDX58O95786 925 aaKnown RBP13.42□□□□□ -0.26
NCOR1-220ENST00000580617 WDR63Q8IWG1 891 aa13.42□□□□□ -0.26
NCOR1-220ENST00000580617 SP8Q8IXZ3 490 aa13.42□□□□□ -0.26
NCOR1-220ENST00000580617 JDP2Q8WYK2 163 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms