RNA–Protein interactions for RNA: ENST00000580155.5

RBFOX3-203, Transcript of RNA binding fox-1 homolog 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RBFOX3, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-203ENST00000580155 IFT57Q9NWB7 429 aa17.53■□□□□ 0.4
RBFOX3-203ENST00000580155 SNED1Q8TER0 1413 aa17.53■□□□□ 0.4
RBFOX3-203ENST00000580155 PARP10Q53GL7 1025 aa17.52■□□□□ 0.4
RBFOX3-203ENST00000580155 SYNE4Q8N205 404 aa17.52■□□□□ 0.4
RBFOX3-203ENST00000580155 MRS2Q9HD23 443 aa17.52■□□□□ 0.4
RBFOX3-203ENST00000580155 WDR90Q96KV7 1748 aa17.52■□□□□ 0.4
RBFOX3-203ENST00000580155 GLTPD2A6NH11 291 aa17.52■□□□□ 0.39
RBFOX3-203ENST00000580155 HOXB7P09629 217 aa17.52■□□□□ 0.39
RBFOX3-203ENST00000580155 SOGA3Q5TF21 947 aa17.52■□□□□ 0.39
RBFOX3-203ENST00000580155 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.39
RBFOX3-203ENST00000580155 DDX60Q8IY21 1712 aaKnown RBP17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 ANP32CO43423 234 aa17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 GNAI1P63096 354 aa17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 NLRP10Q86W26 655 aa17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 UTP14AQ9BVJ6 771 aaKnown RBP17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
RBFOX3-203ENST00000580155 TAF1P21675 1872 aa17.5■□□□□ 0.39
RBFOX3-203ENST00000580155 TCERG1O14776 1098 aaKnown RBP17.5■□□□□ 0.39
RBFOX3-203ENST00000580155 C8orf58Q8NAV2 365 aa17.5■□□□□ 0.39
RBFOX3-203ENST00000580155 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
RBFOX3-203ENST00000580155 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
RBFOX3-203ENST00000580155 COL4A5P29400 1685 aa17.49■□□□□ 0.39
RBFOX3-203ENST00000580155 ALDH1B1P30837 517 aa17.49■□□□□ 0.39
RBFOX3-203ENST00000580155 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.39
RBFOX3-203ENST00000580155 TCIRG1Q13488 830 aa17.49■□□□□ 0.39
RBFOX3-203ENST00000580155 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
RBFOX3-203ENST00000580155 CALD1Q05682 793 aaKnown RBP17.48■□□□□ 0.39
RBFOX3-203ENST00000580155 RBM46Q8TBY0 533 aaKnown RBP17.48■□□□□ 0.39
RBFOX3-203ENST00000580155 PHAXQ9H814 394 aaKnown RBP17.48■□□□□ 0.39
RBFOX3-203ENST00000580155 POTECB2RU33 542 aa17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 HSP90AB3PQ58FF7 597 aa17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 TSPYL6Q8N831 410 aa17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 PLBD2Q8NHP8 589 aa17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 COL4A1P02462 1669 aa17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 DDNO94850 711 aaPredicted RBP17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
RBFOX3-203ENST00000580155 ABCC4O15439 1325 aa17.46■□□□□ 0.39
RBFOX3-203ENST00000580155 ANKRD13DQ6ZTN6 518 aa17.46■□□□□ 0.39
RBFOX3-203ENST00000580155 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
RBFOX3-203ENST00000580155 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
RBFOX3-203ENST00000580155 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
RBFOX3-203ENST00000580155 HTRA3P83110 453 aa17.45■□□□□ 0.38
RBFOX3-203ENST00000580155 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
RBFOX3-203ENST00000580155 DPY19L2Q6NUT2 758 aa17.45■□□□□ 0.38
RBFOX3-203ENST00000580155 WWC1Q8IX03 1113 aa17.45■□□□□ 0.38
RBFOX3-203ENST00000580155 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
RBFOX3-203ENST00000580155 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
RBFOX3-203ENST00000580155 RNF123Q5XPI4 1314 aa17.44■□□□□ 0.38
RBFOX3-203ENST00000580155 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
RBFOX3-203ENST00000580155 VEGFAP15692 232 aaPredicted RBP17.44■□□□□ 0.38
RBFOX3-203ENST00000580155 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
RBFOX3-203ENST00000580155 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
RBFOX3-203ENST00000580155 ISCA1Q9BUE6 129 aa17.44■□□□□ 0.38
RBFOX3-203ENST00000580155 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
RBFOX3-203ENST00000580155 POTEIP0CG38 1075 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 POTEJP0CG39 1038 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 CCDC27Q2M243 656 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 PSMD1Q99460 953 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 APLP1P51693 650 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 GOLGA2Q08379 1002 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 FSTL1Q12841 308 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 SMC1BQ8NDV3 1235 aa17.42■□□□□ 0.38
RBFOX3-203ENST00000580155 LRRC37AA6NMS7 1700 aa17.41■□□□□ 0.38
RBFOX3-203ENST00000580155 MYD88Q99836 296 aa17.41■□□□□ 0.38
RBFOX3-203ENST00000580155 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
RBFOX3-203ENST00000580155 SCN4AP35499 1836 aa17.4■□□□□ 0.38
RBFOX3-203ENST00000580155 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
RBFOX3-203ENST00000580155 FANCIQ9NVI1 1328 aa17.39■□□□□ 0.37
RBFOX3-203ENST00000580155 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.37
RBFOX3-203ENST00000580155 CC2D2BQ6DHV5 1058 aa17.39■□□□□ 0.37
RBFOX3-203ENST00000580155 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.37
RBFOX3-203ENST00000580155 LTBP1Q14766 1721 aa17.39■□□□□ 0.37
RBFOX3-203ENST00000580155 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
RBFOX3-203ENST00000580155 JARID2Q92833 1246 aaPredicted RBP17.38■□□□□ 0.37
RBFOX3-203ENST00000580155 FZD9O00144 591 aa17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 GRAPQ13588 217 aa17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 AOC3Q16853 763 aa17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 TWISTNBQ3B726 338 aaPredicted RBP17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 IL16Q14005 1332 aa17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 G2E3Q7L622 706 aa17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
RBFOX3-203ENST00000580155 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
RBFOX3-203ENST00000580155 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
RBFOX3-203ENST00000580155 TRIM28Q13263 835 aaKnown RBP17.36■□□□□ 0.37
RBFOX3-203ENST00000580155 JDP2Q8WYK2 163 aa17.36■□□□□ 0.37
RBFOX3-203ENST00000580155 CELF1Q92879 486 aaKnown RBP17.36■□□□□ 0.37
RBFOX3-203ENST00000580155 MAP3K2Q9Y2U5 619 aa17.36■□□□□ 0.37
RBFOX3-203ENST00000580155 ADAMTSL1Q8N6G6 1762 aa17.36■□□□□ 0.37
RBFOX3-203ENST00000580155 DNAJC5GQ8N7S2 189 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms