RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 ARFGEF2Q9Y6D5 1785 aa27.6■■■□□ 2.01
TSEN54-207ENST00000580013 ST5P78524 1137 aa27.59■■■□□ 2.01
TSEN54-207ENST00000580013 PTPRCP08575 1304 aa27.59■■■□□ 2.01
TSEN54-207ENST00000580013 RNF123Q5XPI4 1314 aa27.59■■■□□ 2.01
TSEN54-207ENST00000580013 CHRNA5P30532 468 aa27.58■■■□□ 2.01
TSEN54-207ENST00000580013 BEND3Q5T5X7 828 aa27.58■■■□□ 2.01
TSEN54-207ENST00000580013 TRMT112Q9UI30 125 aaKnown RBP27.58■■■□□ 2.01
TSEN54-207ENST00000580013 NEURL1BA8MQ27 555 aa27.57■■■□□ 2
TSEN54-207ENST00000580013 BCAR3O75815 825 aa27.57■■■□□ 2
TSEN54-207ENST00000580013 PDE6BP35913 854 aa27.57■■■□□ 2
TSEN54-207ENST00000580013 NOB1Q9ULX3 412 aaKnown RBP27.57■■■□□ 2
TSEN54-207ENST00000580013 PDZRN3Q9UPQ7 1066 aa27.57■■■□□ 2
TSEN54-207ENST00000580013 KIAA1551Q9HCM1 1747 aa27.57■■■□□ 2
TSEN54-207ENST00000580013 ANKRD36CQ5JPF3 1778 aa27.57■■■□□ 2
TSEN54-207ENST00000580013 CWF19L2Q2TBE0 894 aaKnown RBP27.56■■■□□ 2
TSEN54-207ENST00000580013 LINS1Q8NG48 757 aa27.56■■■□□ 2
TSEN54-207ENST00000580013 CWC25Q9NXE8 425 aaPredicted RBP27.56■■■□□ 2
TSEN54-207ENST00000580013 ABCC12Q96J65 1359 aa27.56■■■□□ 2
TSEN54-207ENST00000580013 GTF2E1P29083 439 aaPredicted RBP27.55■■■□□ 2
TSEN54-207ENST00000580013 NEXNQ0ZGT2 675 aa27.55■■■□□ 2
TSEN54-207ENST00000580013 ZBTB38Q8NAP3 1195 aaPredicted RBP27.55■■■□□ 2
TSEN54-207ENST00000580013 SRGNP10124 158 aa27.54■■■□□ 2
TSEN54-207ENST00000580013 RIC1Q4ADV7 1423 aa27.54■■■□□ 2
TSEN54-207ENST00000580013 C2CD5Q86YS7 1000 aa27.54■■■□□ 2
TSEN54-207ENST00000580013 ANKRD31Q8N7Z5 1873 aa27.54■■■□□ 2
TSEN54-207ENST00000580013 ARHGAP45Q92619 1136 aa27.54■■■□□ 2
TSEN54-207ENST00000580013 FAM89AQ96GI7 184 aa27.54■■■□□ 2
TSEN54-207ENST00000580013 YTHDC1Q96MU7 727 aaKnown RBP27.54■■■□□ 2
TSEN54-207ENST00000580013 SH3TC1Q8TE82 1336 aa27.53■■■□□ 2
TSEN54-207ENST00000580013 H0YIN7 160 aa27.53■■■□□ 2
TSEN54-207ENST00000580013 H7C1W4 665 aa27.53■■■□□ 2
TSEN54-207ENST00000580013 NPHP1O15259 732 aa27.53■■■□□ 2
TSEN54-207ENST00000580013 PCCAP05165 728 aaPredicted RBP27.53■■■□□ 2
TSEN54-207ENST00000580013 CRY2Q49AN0 593 aa27.53■■■□□ 2
TSEN54-207ENST00000580013 C3orf67Q6ZVT6 689 aa27.53■■■□□ 2
TSEN54-207ENST00000580013 GCKRQ14397 625 aa27.52■■■□□ 2
TSEN54-207ENST00000580013 HCLS1P14317 486 aaPredicted RBP27.5■■□□□ 1.99
TSEN54-207ENST00000580013 CASP7P55210 303 aa27.5■■□□□ 1.99
TSEN54-207ENST00000580013 PIM2Q9P1W9 311 aa27.5■■□□□ 1.99
TSEN54-207ENST00000580013 ALDH1L1O75891 902 aa27.49■■□□□ 1.99
TSEN54-207ENST00000580013 STYK1Q6J9G0 422 aa27.49■■□□□ 1.99
TSEN54-207ENST00000580013 JARID2Q92833 1246 aaPredicted RBP27.49■■□□□ 1.99
TSEN54-207ENST00000580013 N4BP2Q86UW6 1770 aaPredicted RBP27.48■■□□□ 1.99
TSEN54-207ENST00000580013 IRS4O14654 1257 aaPredicted RBP27.48■■□□□ 1.99
TSEN54-207ENST00000580013 YBX3P16989 372 aaKnown RBP eCLIP27.48■■□□□ 1.99
TSEN54-207ENST00000580013 HOXA10P31260 410 aaPredicted RBP27.48■■□□□ 1.99
TSEN54-207ENST00000580013 MASTLQ96GX5 879 aa27.48■■□□□ 1.99
TSEN54-207ENST00000580013 NLRP3Q96P20 1036 aa27.48■■□□□ 1.99
TSEN54-207ENST00000580013 KIF16BQ96L93 1317 aa27.47■■□□□ 1.99
TSEN54-207ENST00000580013 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
TSEN54-207ENST00000580013 API5Q9BZZ5 524 aaKnown RBP27.47■■□□□ 1.99
TSEN54-207ENST00000580013 CDHR2Q9BYE9 1310 aa27.46■■□□□ 1.99
TSEN54-207ENST00000580013 NPR1P16066 1061 aa27.46■■□□□ 1.99
TSEN54-207ENST00000580013 SF3B3Q15393 1217 aaKnown RBP27.46■■□□□ 1.99
TSEN54-207ENST00000580013 RTL5Q5HYW3 569 aaPredicted RBP27.46■■□□□ 1.99
TSEN54-207ENST00000580013 SRCIN1Q9C0H9 1055 aa27.46■■□□□ 1.99
TSEN54-207ENST00000580013 IPO8O15397 1037 aaKnown RBP27.45■■□□□ 1.98
TSEN54-207ENST00000580013 DALRD3Q5D0E6 543 aaKnown RBP27.44■■□□□ 1.98
TSEN54-207ENST00000580013 TTLL6Q8N841 843 aa27.44■■□□□ 1.98
TSEN54-207ENST00000580013 ZNF622Q969S3 477 aaKnown RBP eCLIP27.44■■□□□ 1.98
TSEN54-207ENST00000580013 GOLGB1Q14789 3259 aaKnown RBP27.43■■□□□ 1.98
TSEN54-207ENST00000580013 TRIM27P14373 513 aa27.43■■□□□ 1.98
TSEN54-207ENST00000580013 ATF7IPQ6VMQ6 1270 aa27.43■■□□□ 1.98
TSEN54-207ENST00000580013 PLA2G12BQ9BX93 195 aa27.43■■□□□ 1.98
TSEN54-207ENST00000580013 TNNQ9UQP3 1299 aa27.43■■□□□ 1.98
TSEN54-207ENST00000580013 TNRC6CQ9HCJ0 1690 aaKnown RBP27.43■■□□□ 1.98
TSEN54-207ENST00000580013 PDE8AO60658 829 aa27.42■■□□□ 1.98
TSEN54-207ENST00000580013 CNKSR1Q969H4 720 aa27.42■■□□□ 1.98
TSEN54-207ENST00000580013 CRAMP1Q96RY5 1269 aa27.42■■□□□ 1.98
TSEN54-207ENST00000580013 RCAN3Q9UKA8 241 aa27.42■■□□□ 1.98
TSEN54-207ENST00000580013 WWC3Q9ULE0 1092 aa27.42■■□□□ 1.98
TSEN54-207ENST00000580013 BRCA1P38398 1863 aaKnown RBP27.42■■□□□ 1.98
TSEN54-207ENST00000580013 UTYO14607 1347 aa27.41■■□□□ 1.98
TSEN54-207ENST00000580013 GPR162Q16538 588 aa27.41■■□□□ 1.98
TSEN54-207ENST00000580013 UBE3BQ7Z3V4 1068 aa27.41■■□□□ 1.98
TSEN54-207ENST00000580013 C7orf43Q8WVR3 580 aa27.41■■□□□ 1.98
TSEN54-207ENST00000580013 ABCC4O15439 1325 aa27.41■■□□□ 1.98
TSEN54-207ENST00000580013 GRM8O00222 908 aa27.4■■□□□ 1.98
TSEN54-207ENST00000580013 HSP90B1P14625 803 aaKnown RBP27.4■■□□□ 1.98
TSEN54-207ENST00000580013 INTS3Q68E01 1043 aaKnown RBP27.4■■□□□ 1.98
TSEN54-207ENST00000580013 FRAT1Q92837 279 aaPredicted RBP27.4■■□□□ 1.98
TSEN54-207ENST00000580013 USP44Q9H0E7 712 aa27.4■■□□□ 1.98
TSEN54-207ENST00000580013 BCS1LQ9Y276 419 aa27.4■■□□□ 1.98
TSEN54-207ENST00000580013 COL11A2P13942 1736 aaPredicted RBP27.4■■□□□ 1.98
TSEN54-207ENST00000580013 ALDH1B1P30837 517 aa27.39■■□□□ 1.98
TSEN54-207ENST00000580013 CCT4P50991 539 aaKnown RBP27.39■■□□□ 1.98
TSEN54-207ENST00000580013 ZKSCAN2Q63HK3 967 aa27.39■■□□□ 1.98
TSEN54-207ENST00000580013 DLEC1Q9Y238 1755 aa27.38■■□□□ 1.97
TSEN54-207ENST00000580013 RBM17Q96I25 401 aaKnown RBP27.38■■□□□ 1.97
TSEN54-207ENST00000580013 DDX60Q8IY21 1712 aaKnown RBP27.38■■□□□ 1.97
TSEN54-207ENST00000580013 CSF1RP07333 972 aa27.37■■□□□ 1.97
TSEN54-207ENST00000580013 NBPF7P0C2Y1 421 aaPredicted RBP27.37■■□□□ 1.97
TSEN54-207ENST00000580013 TTLL11Q8NHH1 800 aa27.37■■□□□ 1.97
TSEN54-207ENST00000580013 GRIN3BO60391 1043 aa27.36■■□□□ 1.97
TSEN54-207ENST00000580013 FOXO4P98177 505 aa27.36■■□□□ 1.97
TSEN54-207ENST00000580013 PRPF40BQ6NWY9 871 aaKnown RBP27.36■■□□□ 1.97
TSEN54-207ENST00000580013 PELP1Q8IZL8 1130 aaKnown RBP27.36■■□□□ 1.97
TSEN54-207ENST00000580013 RPGRQ92834 1020 aaKnown RBP27.36■■□□□ 1.97
TSEN54-207ENST00000580013 KAZALD1Q96I82 304 aa27.35■■□□□ 1.97
TSEN54-207ENST00000580013 C9orf78Q9NZ63 289 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms