RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 STYK1Q6J9G0 422 aa30.79■■■□□ 2.52
LIMD2-207ENST00000579329 MASTLQ96GX5 879 aa30.79■■■□□ 2.52
LIMD2-207ENST00000579329 RIC1Q4ADV7 1423 aa30.79■■■□□ 2.52
LIMD2-207ENST00000579329 KLRG2A4D1S0 409 aaPredicted RBP30.78■■■□□ 2.52
LIMD2-207ENST00000579329 UTP14AQ9BVJ6 771 aaKnown RBP30.78■■■□□ 2.52
LIMD2-207ENST00000579329 RNF123Q5XPI4 1314 aa30.77■■■□□ 2.52
LIMD2-207ENST00000579329 NLRP10Q86W26 655 aa30.77■■■□□ 2.52
LIMD2-207ENST00000579329 CNKSR1Q969H4 720 aa30.77■■■□□ 2.52
LIMD2-207ENST00000579329 ARFGEF2Q9Y6D5 1785 aa30.77■■■□□ 2.52
LIMD2-207ENST00000579329 RIC3Q7Z5B4 369 aa30.76■■■□□ 2.51
LIMD2-207ENST00000579329 TNRC6CQ9HCJ0 1690 aaKnown RBP30.76■■■□□ 2.51
LIMD2-207ENST00000579329 DDX58O95786 925 aaKnown RBP30.75■■■□□ 2.51
LIMD2-207ENST00000579329 NPR1P16066 1061 aa30.75■■■□□ 2.51
LIMD2-207ENST00000579329 TCERG1O14776 1098 aaKnown RBP30.74■■■□□ 2.51
LIMD2-207ENST00000579329 VAMP4O75379 141 aa30.74■■■□□ 2.51
LIMD2-207ENST00000579329 ISCA1Q9BUE6 129 aa30.73■■■□□ 2.51
LIMD2-207ENST00000579329 E9PSI1 815 aa30.71■■■□□ 2.51
LIMD2-207ENST00000579329 SLC4A2P04920 1241 aa30.71■■■□□ 2.51
LIMD2-207ENST00000579329 CRY2Q49AN0 593 aa30.71■■■□□ 2.51
LIMD2-207ENST00000579329 ATP5J2-PTCD1G3V325 749 aa30.7■■■□□ 2.51
LIMD2-207ENST00000579329 PRPF40BQ6NWY9 871 aaKnown RBP30.7■■■□□ 2.51
LIMD2-207ENST00000579329 TRMT112Q9UI30 125 aaKnown RBP30.7■■■□□ 2.51
LIMD2-207ENST00000579329 SLC10A5Q5PT55 438 aa30.69■■■□□ 2.5
LIMD2-207ENST00000579329 SH3TC1Q8TE82 1336 aa30.69■■■□□ 2.5
LIMD2-207ENST00000579329 CACNA1SQ13698 1873 aa30.68■■■□□ 2.5
LIMD2-207ENST00000579329 TRIM28Q13263 835 aaKnown RBP30.68■■■□□ 2.5
LIMD2-207ENST00000579329 KSR2Q6VAB6 950 aa30.67■■■□□ 2.5
LIMD2-207ENST00000579329 RPGRQ92834 1020 aaKnown RBP30.67■■■□□ 2.5
LIMD2-207ENST00000579329 NLRP3Q96P20 1036 aa30.67■■■□□ 2.5
LIMD2-207ENST00000579329 MYD88Q99836 296 aa30.67■■■□□ 2.5
LIMD2-207ENST00000579329 SLX4Q8IY92 1834 aa30.67■■■□□ 2.5
LIMD2-207ENST00000579329 C21orf2O43822 256 aa30.66■■■□□ 2.5
LIMD2-207ENST00000579329 ALDH1B1P30837 517 aa30.66■■■□□ 2.5
LIMD2-207ENST00000579329 G2E3Q7L622 706 aa30.66■■■□□ 2.5
LIMD2-207ENST00000579329 METTL22Q9BUU2 404 aaPredicted RBP30.66■■■□□ 2.5
LIMD2-207ENST00000579329 ZNF219Q9P2Y4 722 aaPredicted RBP30.66■■■□□ 2.5
LIMD2-207ENST00000579329 CACNA1FO60840 1977 aa30.65■■■□□ 2.5
LIMD2-207ENST00000579329 SLFN5Q08AF3 891 aa30.65■■■□□ 2.5
LIMD2-207ENST00000579329 SOGA3Q5TF21 947 aa30.65■■■□□ 2.5
LIMD2-207ENST00000579329 MAP3K2Q9Y2U5 619 aa30.65■■■□□ 2.5
LIMD2-207ENST00000579329 PI4KAP2A4QPH2 592 aa30.64■■■□□ 2.5
LIMD2-207ENST00000579329 APLP1P51693 650 aa30.64■■■□□ 2.5
LIMD2-207ENST00000579329 FLIIQ13045 1269 aa30.64■■■□□ 2.5
LIMD2-207ENST00000579329 PI4KAP1Q8N8J0 262 aa30.64■■■□□ 2.5
LIMD2-207ENST00000579329 TOMM70O94826 608 aa30.63■■■□□ 2.49
LIMD2-207ENST00000579329 HOXA10P31260 410 aaPredicted RBP30.63■■■□□ 2.49
LIMD2-207ENST00000579329 C3orf67Q6ZVT6 689 aa30.63■■■□□ 2.49
LIMD2-207ENST00000579329 RASSF7Q02833 373 aa30.62■■■□□ 2.49
LIMD2-207ENST00000579329 C9orf131Q5VYM1 1079 aa30.62■■■□□ 2.49
LIMD2-207ENST00000579329 SYNE4Q8N205 404 aa30.62■■■□□ 2.49
LIMD2-207ENST00000579329 ZNF428Q96B54 188 aa30.62■■■□□ 2.49
LIMD2-207ENST00000579329 RBM17Q96I25 401 aaKnown RBP30.62■■■□□ 2.49
LIMD2-207ENST00000579329 NMRK2Q9NPI5 230 aa30.62■■■□□ 2.49
LIMD2-207ENST00000579329 HCLS1P14317 486 aaPredicted RBP30.61■■■□□ 2.49
LIMD2-207ENST00000579329 CCDC191Q8NCU4 936 aa30.61■■■□□ 2.49
LIMD2-207ENST00000579329 WDR90Q96KV7 1748 aa30.61■■■□□ 2.49
LIMD2-207ENST00000579329 NFKBIEO00221 500 aa30.6■■■□□ 2.49
LIMD2-207ENST00000579329 NEXNQ0ZGT2 675 aa30.6■■■□□ 2.49
LIMD2-207ENST00000579329 FKBP5Q13451 457 aaPredicted RBP30.6■■■□□ 2.49
LIMD2-207ENST00000579329 C7orf43Q8WVR3 580 aa30.6■■■□□ 2.49
LIMD2-207ENST00000579329 FAM89AQ96GI7 184 aa30.6■■■□□ 2.49
LIMD2-207ENST00000579329 CRAMP1Q96RY5 1269 aa30.6■■■□□ 2.49
LIMD2-207ENST00000579329 CDCA7LQ96GN5 454 aa30.59■■■□□ 2.49
LIMD2-207ENST00000579329 CWC25Q9NXE8 425 aaPredicted RBP30.59■■■□□ 2.49
LIMD2-207ENST00000579329 RNF181Q9P0P0 153 aa30.59■■■□□ 2.49
LIMD2-207ENST00000579329 LAMB2P55268 1798 aa30.59■■■□□ 2.49
LIMD2-207ENST00000579329 CCDC93Q567U6 631 aa30.58■■■□□ 2.49
LIMD2-207ENST00000579329 FER1L6Q2WGJ9 1857 aa30.58■■■□□ 2.49
LIMD2-207ENST00000579329 SBF1O95248 1867 aa30.57■■■□□ 2.48
LIMD2-207ENST00000579329 DDX60Q8IY21 1712 aaKnown RBP30.57■■■□□ 2.48
LIMD2-207ENST00000579329 LMNB1P20700 586 aa30.57■■■□□ 2.48
LIMD2-207ENST00000579329 DNAJC5GQ8N7S2 189 aa30.57■■■□□ 2.48
LIMD2-207ENST00000579329 ZBTB38Q8NAP3 1195 aaPredicted RBP30.57■■■□□ 2.48
LIMD2-207ENST00000579329 LTBP3Q9NS15 1303 aa30.56■■■□□ 2.48
LIMD2-207ENST00000579329 TAOK3Q9H2K8 898 aa30.56■■■□□ 2.48
LIMD2-207ENST00000579329 PCCAP05165 728 aaPredicted RBP30.55■■■□□ 2.48
LIMD2-207ENST00000579329 RTL5Q5HYW3 569 aaPredicted RBP30.55■■■□□ 2.48
LIMD2-207ENST00000579329 TRMT2AQ8IZ69 625 aaKnown RBP30.55■■■□□ 2.48
LIMD2-207ENST00000579329 DNAAF4Q8WXU2 420 aa30.55■■■□□ 2.48
LIMD2-207ENST00000579329 IRS4O14654 1257 aaPredicted RBP30.54■■■□□ 2.48
LIMD2-207ENST00000579329 IGKV5-2P06315 115 aa30.54■■■□□ 2.48
LIMD2-207ENST00000579329 HSP90B1P14625 803 aaKnown RBP30.54■■■□□ 2.48
LIMD2-207ENST00000579329 ABCC4O15439 1325 aa30.52■■■□□ 2.48
LIMD2-207ENST00000579329 PPEF1O14829 653 aaPredicted RBP30.52■■■□□ 2.48
LIMD2-207ENST00000579329 PRELPP51888 382 aa30.52■■■□□ 2.48
LIMD2-207ENST00000579329 CC2D2BQ6DHV5 1058 aa30.52■■■□□ 2.48
LIMD2-207ENST00000579329 DDX46Q7L014 1031 aaKnown RBP30.52■■■□□ 2.48
LIMD2-207ENST00000579329 RTKN2Q8IZC4 609 aa30.52■■■□□ 2.48
LIMD2-207ENST00000579329 NEURL1BA8MQ27 555 aa30.51■■■□□ 2.47
LIMD2-207ENST00000579329 ZC3H4Q9UPT8 1303 aaKnown RBP30.5■■■□□ 2.47
LIMD2-207ENST00000579329 SF3B3Q15393 1217 aaKnown RBP30.5■■■□□ 2.47
LIMD2-207ENST00000579329 CWF19L2Q2TBE0 894 aaKnown RBP30.5■■■□□ 2.47
LIMD2-207ENST00000579329 OLFM4Q6UX06 510 aa30.5■■■□□ 2.47
LIMD2-207ENST00000579329 HNRNPUQ00839 825 aaKnown RBP eCLIP30.49■■■□□ 2.47
LIMD2-207ENST00000579329 FKBP4Q02790 459 aaKnown RBP eCLIP30.49■■■□□ 2.47
LIMD2-207ENST00000579329 RBM46Q8TBY0 533 aaKnown RBP30.49■■■□□ 2.47
LIMD2-207ENST00000579329 CDHR2Q9BYE9 1310 aa30.48■■■□□ 2.47
LIMD2-207ENST00000579329 GRAPQ13588 217 aa30.48■■■□□ 2.47
LIMD2-207ENST00000579329 LINS1Q8NG48 757 aa30.48■■■□□ 2.47
LIMD2-207ENST00000579329 GRAPLQ8TC17 118 aaPredicted RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms