RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 ERFEQ4G0M1 354 aa19.62■□□□□ 0.73
IFT20-208ENST00000578985 DNAAF4Q8WXU2 420 aa19.62■□□□□ 0.73
IFT20-208ENST00000578985 CHRNA5P30532 468 aa19.61■□□□□ 0.73
IFT20-208ENST00000578985 C2CD5Q86YS7 1000 aa19.61■□□□□ 0.73
IFT20-208ENST00000578985 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
IFT20-208ENST00000578985 TRMT112Q9UI30 125 aaKnown RBP19.61■□□□□ 0.73
IFT20-208ENST00000578985 ABCC12Q96J65 1359 aa19.6■□□□□ 0.73
IFT20-208ENST00000578985 RNF123Q5XPI4 1314 aa19.6■□□□□ 0.73
IFT20-208ENST00000578985 F6X3S4 739 aa19.6■□□□□ 0.73
IFT20-208ENST00000578985 CCDC191Q8NCU4 936 aa19.6■□□□□ 0.73
IFT20-208ENST00000578985 PDZRN3Q9UPQ7 1066 aa19.6■□□□□ 0.73
IFT20-208ENST00000578985 BRCA1P38398 1863 aaKnown RBP19.6■□□□□ 0.73
IFT20-208ENST00000578985 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
IFT20-208ENST00000578985 H0YIN7 160 aa19.59■□□□□ 0.73
IFT20-208ENST00000578985 IGKV5-2P06315 115 aa19.59■□□□□ 0.73
IFT20-208ENST00000578985 CWC25Q9NXE8 425 aaPredicted RBP19.59■□□□□ 0.73
IFT20-208ENST00000578985 PTPRCP08575 1304 aa19.58■□□□□ 0.73
IFT20-208ENST00000578985 SH3TC1Q8TE82 1336 aa19.58■□□□□ 0.73
IFT20-208ENST00000578985 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
IFT20-208ENST00000578985 KCNA3P22001 575 aa19.58■□□□□ 0.72
IFT20-208ENST00000578985 BRPF1P55201 1214 aaPredicted RBP19.58■□□□□ 0.72
IFT20-208ENST00000578985 SLC10A5Q5PT55 438 aa19.58■□□□□ 0.72
IFT20-208ENST00000578985 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.72
IFT20-208ENST00000578985 WWC3Q9ULE0 1092 aa19.58■□□□□ 0.72
IFT20-208ENST00000578985 COL11A2P13942 1736 aaPredicted RBP19.58■□□□□ 0.72
IFT20-208ENST00000578985 TNRC6CQ9HCJ0 1690 aaKnown RBP19.57■□□□□ 0.72
IFT20-208ENST00000578985 GPR162Q16538 588 aa19.57■□□□□ 0.72
IFT20-208ENST00000578985 CWF19L2Q2TBE0 894 aaKnown RBP19.57■□□□□ 0.72
IFT20-208ENST00000578985 SYNE4Q8N205 404 aa19.57■□□□□ 0.72
IFT20-208ENST00000578985 PIM2Q9P1W9 311 aa19.57■□□□□ 0.72
IFT20-208ENST00000578985 RIC1Q4ADV7 1423 aa19.57■□□□□ 0.72
IFT20-208ENST00000578985 KLRG2A4D1S0 409 aaPredicted RBP19.56■□□□□ 0.72
IFT20-208ENST00000578985 NEURL1BA8MQ27 555 aa19.56■□□□□ 0.72
IFT20-208ENST00000578985 ZBTB38Q8NAP3 1195 aaPredicted RBP19.56■□□□□ 0.72
IFT20-208ENST00000578985 LINS1Q8NG48 757 aa19.56■□□□□ 0.72
IFT20-208ENST00000578985 FAM89AQ96GI7 184 aa19.56■□□□□ 0.72
IFT20-208ENST00000578985 UTRNP46939 3433 aa19.55■□□□□ 0.72
IFT20-208ENST00000578985 PCCAP05165 728 aaPredicted RBP19.55■□□□□ 0.72
IFT20-208ENST00000578985 HCLS1P14317 486 aaPredicted RBP19.55■□□□□ 0.72
IFT20-208ENST00000578985 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
IFT20-208ENST00000578985 SLC4A10Q6U841 1118 aa19.55■□□□□ 0.72
IFT20-208ENST00000578985 ZNF622Q969S3 477 aaKnown RBP eCLIP19.55■□□□□ 0.722e-6■□□□□ 8.4
IFT20-208ENST00000578985 NOB1Q9ULX3 412 aaKnown RBP19.55■□□□□ 0.72
IFT20-208ENST00000578985 LAMB2P55268 1798 aa19.55■□□□□ 0.72
IFT20-208ENST00000578985 DDX60Q8IY21 1712 aaKnown RBP19.54■□□□□ 0.72
IFT20-208ENST00000578985 BCAR3O75815 825 aa19.54■□□□□ 0.72
IFT20-208ENST00000578985 SRGNP10124 158 aa19.54■□□□□ 0.72
IFT20-208ENST00000578985 BEND3Q5T5X7 828 aa19.54■□□□□ 0.72
IFT20-208ENST00000578985 STYK1Q6J9G0 422 aa19.54■□□□□ 0.72
IFT20-208ENST00000578985 MASTLQ96GX5 879 aa19.54■□□□□ 0.72
IFT20-208ENST00000578985 NLRP3Q96P20 1036 aa19.54■□□□□ 0.72
IFT20-208ENST00000578985 KIF16BQ96L93 1317 aa19.53■□□□□ 0.72
IFT20-208ENST00000578985 NPR1P16066 1061 aa19.53■□□□□ 0.72
IFT20-208ENST00000578985 YBX3P16989 372 aaKnown RBP eCLIP19.53■□□□□ 0.72
IFT20-208ENST00000578985 GCKRQ14397 625 aa19.53■□□□□ 0.72
IFT20-208ENST00000578985 DALRD3Q5D0E6 543 aaKnown RBP19.53■□□□□ 0.72
IFT20-208ENST00000578985 JARID2Q92833 1246 aaPredicted RBP19.53■□□□□ 0.72
IFT20-208ENST00000578985 BCS1LQ9Y276 419 aa19.53■□□□□ 0.72
IFT20-208ENST00000578985 CACNA1SQ13698 1873 aa19.53■□□□□ 0.72
IFT20-208ENST00000578985 IRS4O14654 1257 aaPredicted RBP19.52■□□□□ 0.72
IFT20-208ENST00000578985 CRY2Q49AN0 593 aa19.52■□□□□ 0.72
IFT20-208ENST00000578985 C3orf67Q6ZVT6 689 aa19.52■□□□□ 0.72
IFT20-208ENST00000578985 TTLL6Q8N841 843 aa19.52■□□□□ 0.72
IFT20-208ENST00000578985 API5Q9BZZ5 524 aaKnown RBP19.52■□□□□ 0.72
IFT20-208ENST00000578985 ARFGEF1Q9Y6D6 1849 aa19.52■□□□□ 0.72
IFT20-208ENST00000578985 IPO8O15397 1037 aaKnown RBP19.51■□□□□ 0.71
IFT20-208ENST00000578985 ALDH1L1O75891 902 aa19.51■□□□□ 0.71
IFT20-208ENST00000578985 HSP90B1P14625 803 aaKnown RBP19.51■□□□□ 0.71
IFT20-208ENST00000578985 ARHGAP45Q92619 1136 aa19.51■□□□□ 0.71
IFT20-208ENST00000578985 CNKSR1Q969H4 720 aa19.51■□□□□ 0.71
IFT20-208ENST00000578985 SRCIN1Q9C0H9 1055 aa19.51■□□□□ 0.71
IFT20-208ENST00000578985 H7C1W4 665 aa19.5■□□□□ 0.71
IFT20-208ENST00000578985 RPGRQ92834 1020 aaKnown RBP19.5■□□□□ 0.71
IFT20-208ENST00000578985 SLX4Q8IY92 1834 aa19.5■□□□□ 0.71
IFT20-208ENST00000578985 CDHR2Q9BYE9 1310 aa19.5■□□□□ 0.71
IFT20-208ENST00000578985 GRIN3BO60391 1043 aa19.49■□□□□ 0.71
IFT20-208ENST00000578985 UBE3BQ7Z3V4 1068 aa19.49■□□□□ 0.71
IFT20-208ENST00000578985 FRAT1Q92837 279 aaPredicted RBP19.49■□□□□ 0.71
IFT20-208ENST00000578985 RBM17Q96I25 401 aaKnown RBP19.49■□□□□ 0.71
IFT20-208ENST00000578985 MYH3P11055 1940 aa19.49■□□□□ 0.71
IFT20-208ENST00000578985 ALDH1B1P30837 517 aa19.48■□□□□ 0.71
IFT20-208ENST00000578985 HOXA10P31260 410 aaPredicted RBP19.48■□□□□ 0.71
IFT20-208ENST00000578985 PDE8AO60658 829 aa19.47■□□□□ 0.71
IFT20-208ENST00000578985 PRPF40BQ6NWY9 871 aaKnown RBP19.47■□□□□ 0.71
IFT20-208ENST00000578985 CRAMP1Q96RY5 1269 aa19.47■□□□□ 0.71
IFT20-208ENST00000578985 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
IFT20-208ENST00000578985 GRM8O00222 908 aa19.46■□□□□ 0.71
IFT20-208ENST00000578985 CCT4P50991 539 aaKnown RBP19.46■□□□□ 0.71
IFT20-208ENST00000578985 CASP7P55210 303 aa19.46■□□□□ 0.71
IFT20-208ENST00000578985 SF3B3Q15393 1217 aaKnown RBP19.46■□□□□ 0.71
IFT20-208ENST00000578985 ATF7IPQ6VMQ6 1270 aa19.46■□□□□ 0.71
IFT20-208ENST00000578985 C9orf78Q9NZ63 289 aaPredicted RBP19.46■□□□□ 0.71
IFT20-208ENST00000578985 TAF1P21675 1872 aa19.45■□□□□ 0.7
IFT20-208ENST00000578985 TRIM27P14373 513 aa19.45■□□□□ 0.7
IFT20-208ENST00000578985 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
IFT20-208ENST00000578985 DDX46Q7L014 1031 aaKnown RBP19.45■□□□□ 0.7
IFT20-208ENST00000578985 ZNF219Q9P2Y4 722 aaPredicted RBP19.45■□□□□ 0.7
IFT20-208ENST00000578985 YY1P25490 414 aa19.44■□□□□ 0.7
IFT20-208ENST00000578985 PLA2G12BQ9BX93 195 aa19.44■□□□□ 0.7
IFT20-208ENST00000578985 CHD4Q14839 1912 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms