RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 MKRN1Q9UHC7 482 aaKnown RBP5.65□□□□□ -1.5
PTPRM-209ENST00000578698 EML3Q32P44 896 aa5.64□□□□□ -1.51
PTPRM-209ENST00000578698 CRTC2Q53ET0 693 aaPredicted RBP5.64□□□□□ -1.51
PTPRM-209ENST00000578698 LARP1Q6PKG0 1096 aaKnown RBP5.64□□□□□ -1.51
PTPRM-209ENST00000578698 PARP3Q9Y6F1 533 aa5.64□□□□□ -1.51
PTPRM-209ENST00000578698 RASA1P20936 1047 aa5.63□□□□□ -1.51
PTPRM-209ENST00000578698 LAMC2Q13753 1193 aa5.63□□□□□ -1.51
PTPRM-209ENST00000578698 LRP8Q14114 963 aa5.63□□□□□ -1.51
PTPRM-209ENST00000578698 CCDC27Q2M243 656 aa5.63□□□□□ -1.51
PTPRM-209ENST00000578698 C8orf86Q6ZUL3 223 aa5.63□□□□□ -1.51
PTPRM-209ENST00000578698 SND1Q7KZF4 910 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTPRM-209ENST00000578698 EFSO43281 561 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 LZTS3O60299 673 aaPredicted RBP5.62□□□□□ -1.51
PTPRM-209ENST00000578698 SIN3BO75182 1162 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 ALBP02768 609 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 PTK7Q13308 1070 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 MAP7D1Q3KQU3 841 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 SAMD5Q5TGI4 173 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 PHTF2Q8N3S3 785 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 ZNF594Q96JF6 807 aaPredicted RBP5.62□□□□□ -1.51
PTPRM-209ENST00000578698 USP3Q9Y6I4 520 aa5.62□□□□□ -1.51
PTPRM-209ENST00000578698 A6NJY4 79 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 ATP1A2P50993 1020 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 TRAPPC3LQ5T215 181 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 LRRC69Q6ZNQ3 347 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 TRIM50Q86XT4 487 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 CCER1Q8TC90 406 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-209ENST00000578698 FAM200AQ8TCP9 573 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 NEUROD4Q9HD90 331 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 GNEQ9Y223 722 aaKnown RBP5.61□□□□□ -1.51
PTPRM-209ENST00000578698 NOD1Q9Y239 953 aa5.61□□□□□ -1.51
PTPRM-209ENST00000578698 ADARB2-AS1A8MUL3 147 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 C9orf172C9J069 976 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 CDK2AP1O14519 115 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 H2AFB1P0C5Y9 115 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 H2AFB2P0C5Z0 115 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 TXLNAP40222 546 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 NEUROD1Q13562 356 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 RAB44Q7Z6P3 723 aaPredicted RBP5.6□□□□□ -1.51
PTPRM-209ENST00000578698 ANKMY2Q8IV38 441 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 MICALL1Q8N3F8 863 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 OGFOD1Q8N543 542 aa5.6□□□□□ -1.51
PTPRM-209ENST00000578698 RBM19Q9Y4C8 960 aaKnown RBP5.6□□□□□ -1.51
PTPRM-209ENST00000578698 TMEM229AB2RXF0 380 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 HYAL3O43820 417 aaPredicted RBP5.59□□□□□ -1.51
PTPRM-209ENST00000578698 NID1P14543 1247 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 ADH7P40394 386 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 DPYDQ12882 1025 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 COL9A3Q14050 684 aaPredicted RBP5.59□□□□□ -1.51
PTPRM-209ENST00000578698 ZNF295-AS1Q8N0V1 137 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 TNFRSF25Q93038 417 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 SLC30A3Q99726 388 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 MDFIQ99750 246 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 PRDM6Q9NQX0 595 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 CHIC2Q9UKJ5 165 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 IQSEC3Q9UPP2 1182 aaPredicted RBP5.59□□□□□ -1.51
PTPRM-209ENST00000578698 STARD13Q9Y3M8 1113 aa5.59□□□□□ -1.51
PTPRM-209ENST00000578698 UNCXA6NJT0 531 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 CLDN10P78369 228 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 TBC1D8BQ0IIM8 1120 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 SFSWAPQ12872 951 aaKnown RBP5.58□□□□□ -1.52
PTPRM-209ENST00000578698 ADGRE1Q14246 886 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 MBTPS1Q14703 1052 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 MTFR1Q15390 333 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 SWI5Q1ZZU3 235 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 TXNRD3Q86VQ6 643 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 CLP1Q92989 425 aaKnown RBP5.58□□□□□ -1.52
PTPRM-209ENST00000578698 TP53INP1Q96A56 240 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 SLC4A9Q96Q91 983 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 GOLGA2P5Q9HBQ8 144 aa5.58□□□□□ -1.52
PTPRM-209ENST00000578698 LILRB5O75023 590 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 ATP2B4P23634 1241 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 SSFA2P28290 1259 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 ARID4AP29374 1257 aaPredicted RBP5.57□□□□□ -1.52
PTPRM-209ENST00000578698 GTF2IP78347 998 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 PSME1Q06323 249 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 SPEM2Q0P670 501 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 PHLDB3Q6NSJ2 640 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 LARGE2Q8N3Y3 721 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 USP35Q9P2H5 1018 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 USP21Q9UK80 565 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 ZNF232Q9UNY5 417 aa5.57□□□□□ -1.52
PTPRM-209ENST00000578698 A0A0A0MRY4 1105 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 BACH1O14867 736 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 ELNP15502 786 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 SELPP16109 830 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 RAC1P63000 192 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 NRG1Q02297 640 aaPredicted RBP5.56□□□□□ -1.52
PTPRM-209ENST00000578698 FAM69CQ0P6D2 419 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 SHISA2Q6UWI4 295 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 TXNDC2Q86VQ3 553 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 SIX5Q8N196 739 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 L3MBTL2Q969R5 705 aa5.56□□□□□ -1.52
PTPRM-209ENST00000578698 TPCN2Q8NHX9 752 aa5.55□□□□□ -1.52
PTPRM-209ENST00000578698 RHPN1Q8TCX5 695 aa5.55□□□□□ -1.52
PTPRM-209ENST00000578698 ZDHHC1Q8WTX9 485 aa5.55□□□□□ -1.52
PTPRM-209ENST00000578698 IGFLR1Q9H665 355 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms