RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 PRR12Q9ULL5 1215 aa5.68□□□□□ -1.5
GAPLINC-201ENST00000578664 GPR182O15218 404 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 ZFYVE27Q5T4F4 411 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 ZNF697Q5TEC3 545 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 GPRASP2Q96D09 838 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 CCDC85AQ96PX6 553 aaPredicted RBP5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 PLCD4Q9BRC7 762 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 CCDC87Q9NVE4 849 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 PCDHGB7Q9Y5F8 929 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 USP31Q70CQ4 1352 aa5.67□□□□□ -1.5
GAPLINC-201ENST00000578664 MAGEB6P1A0A0J9YX57 407 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 ESPNB1AK53 854 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 KIF3BO15066 747 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 GDF9O60383 454 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 CDC45O75419 566 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 VIL1P09327 827 aaKnown RBP5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 EIF1AXP47813 144 aaKnown RBP5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 CHMP4BP1P59074 171 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 PAK2Q13177 524 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 UBE4AQ14139 1066 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 TRIM67Q6ZTA4 783 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 ZBTB33Q86T24 672 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 PRPF38AQ8NAV1 312 aaKnown RBP5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 GAS2L2Q8NHY3 880 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 MRGPRX2Q96LB1 330 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 CDK15Q96Q40 435 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 PURBQ96QR8 312 aaKnown RBP5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 SRPK1Q96SB4 655 aaKnown RBP5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 CEP89Q96ST8 783 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 IER2Q9BTL4 223 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 NIF3L1Q9GZT8 377 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 NEUROD4Q9HD90 331 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 GGT7Q9UJ14 662 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 MAP4K5Q9Y4K4 846 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 BICRAQ9NZM4 1560 aa5.66□□□□□ -1.5
GAPLINC-201ENST00000578664 PNMA6FA0A0J9YX94 578 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 PAX3P23760 479 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 GYS2P54840 703 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 NFX1Q12986 1120 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 AAMPQ13685 434 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 FAM50AQ14320 339 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 AGERQ15109 404 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 ODR4Q5SWX8 454 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 C16orf46Q6P387 395 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 CLEC4GQ6UXB4 293 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 KIAA0907Q7Z7F0 614 aaPredicted RBP5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 TSEN2Q8NCE0 465 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 EHBP1Q8NDI1 1231 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 SCYL1Q96KG9 808 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 SETDB2Q96T68 719 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 CARD14Q9BXL6 1004 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 COMMD10Q9Y6G5 202 aa5.65□□□□□ -1.5
GAPLINC-201ENST00000578664 GIPC1O14908 333 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 LGR5O75473 907 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 MZF1P28698 734 aaPredicted RBP5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 MASP1P48740 699 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 PRR20EP86478 221 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 PRR20CP86479 221 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 PRR20DP86480 221 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 PRR20BP86481 221 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 PRR20AP86496 221 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 OS9Q13438 667 aaPredicted RBP5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 FOXD4L6Q3SYB3 417 aaPredicted RBP5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 FOXD4L3Q6VB84 417 aaPredicted RBP5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 APPBP2Q92624 585 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 APBA2Q99767 749 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 C12orf49Q9H741 205 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 QTRT2Q9H974 415 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 STIM2Q9P246 746 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 TCEAL9Q9UHQ7 104 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 TTF2Q9UNY4 1162 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 SPG7Q9UQ90 795 aa5.64□□□□□ -1.51
GAPLINC-201ENST00000578664 KLF4O43474 513 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 SSBP05455 408 aaKnown RBP eCLIP5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 EIF4BP23588 611 aaKnown RBP5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 GRM5P41594 1212 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 USP5P45974 858 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 RAB33AQ14088 237 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 C11orf96Q7Z7L8 435 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 DZIP3Q86Y13 1208 aaKnown RBP5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 HOMER1Q86YM7 354 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 CFHR5Q9BXR6 569 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 ZNF408Q9H9D4 720 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 GNL3LQ9NVN8 582 aaKnown RBP5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 FANCLQ9NW38 375 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 TOR4AQ9NXH8 423 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 CDV3Q9UKY7 258 aaKnown RBP5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 PNMA2Q9UL42 364 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 EID1Q9Y6B2 187 aa5.63□□□□□ -1.51
GAPLINC-201ENST00000578664 GIGYF1O75420 1035 aaPredicted RBP5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 ST13P50502 369 aaKnown RBP5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 TAF1CQ15572 869 aaPredicted RBP5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 VPS72Q15906 364 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 MAP9Q49MG5 647 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 GJD3Q8N144 294 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms