RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 SLC10A5Q5PT55 438 aa14.66□□□□□ -0.06
ERBB2-208ENST00000578630 SH3TC1Q8TE82 1336 aa14.66□□□□□ -0.06
ERBB2-208ENST00000578630 SCN7AQ01118 1682 aa14.65□□□□□ -0.06
ERBB2-208ENST00000578630 IBTKQ9P2D0 1353 aaPredicted RBP14.65□□□□□ -0.06
ERBB2-208ENST00000578630 NUP98P52948 1817 aa14.65□□□□□ -0.06
ERBB2-208ENST00000578630 GRIN3BO60391 1043 aa14.65□□□□□ -0.06
ERBB2-208ENST00000578630 CHRNA5P30532 468 aa14.65□□□□□ -0.06
ERBB2-208ENST00000578630 BRPF1P55201 1214 aaPredicted RBP14.65□□□□□ -0.06
ERBB2-208ENST00000578630 ZBTB38Q8NAP3 1195 aaPredicted RBP14.65□□□□□ -0.06
ERBB2-208ENST00000578630 ZNF622Q969S3 477 aaKnown RBP eCLIP14.65□□□□□ -0.06
ERBB2-208ENST00000578630 BCL2L13Q9BXK5 485 aa14.65□□□□□ -0.06
ERBB2-208ENST00000578630 CACNA1FO60840 1977 aa14.65□□□□□ -0.06
ERBB2-208ENST00000578630 KLRG2A4D1S0 409 aaPredicted RBP14.64□□□□□ -0.07
ERBB2-208ENST00000578630 IPO8O15397 1037 aaKnown RBP14.64□□□□□ -0.07
ERBB2-208ENST00000578630 KCNA3P22001 575 aa14.64□□□□□ -0.07
ERBB2-208ENST00000578630 DALRD3Q5D0E6 543 aaKnown RBP14.64□□□□□ -0.07
ERBB2-208ENST00000578630 SLC4A10Q6U841 1118 aa14.64□□□□□ -0.07
ERBB2-208ENST00000578630 TTLL6Q8N841 843 aa14.64□□□□□ -0.07
ERBB2-208ENST00000578630 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
ERBB2-208ENST00000578630 CNKSR1Q969H4 720 aa14.64□□□□□ -0.07
ERBB2-208ENST00000578630 MASTLQ96GX5 879 aa14.64□□□□□ -0.07
ERBB2-208ENST00000578630 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
ERBB2-208ENST00000578630 ADCY9O60503 1353 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 BCORQ6W2J9 1755 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 F6X3S4 739 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 IGKV5-2P06315 115 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 SRGNP10124 158 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 STYK1Q6J9G0 422 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 FAM89AQ96GI7 184 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 NOB1Q9ULX3 412 aaKnown RBP14.63□□□□□ -0.07
ERBB2-208ENST00000578630 BCS1LQ9Y276 419 aa14.63□□□□□ -0.07
ERBB2-208ENST00000578630 NEURL1BA8MQ27 555 aa14.62□□□□□ -0.07
ERBB2-208ENST00000578630 IRS4O14654 1257 aaPredicted RBP14.62□□□□□ -0.07
ERBB2-208ENST00000578630 PCCAP05165 728 aaPredicted RBP14.62□□□□□ -0.07
ERBB2-208ENST00000578630 NPR1P16066 1061 aa14.62□□□□□ -0.07
ERBB2-208ENST00000578630 ARHGAP45Q92619 1136 aa14.62□□□□□ -0.07
ERBB2-208ENST00000578630 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
ERBB2-208ENST00000578630 API5Q9BZZ5 524 aaKnown RBP14.62□□□□□ -0.07
ERBB2-208ENST00000578630 HCLS1P14317 486 aaPredicted RBP14.61□□□□□ -0.07
ERBB2-208ENST00000578630 GCKRQ14397 625 aa14.61□□□□□ -0.07
ERBB2-208ENST00000578630 CWF19L2Q2TBE0 894 aaKnown RBP14.61□□□□□ -0.07
ERBB2-208ENST00000578630 RTL5Q5HYW3 569 aaPredicted RBP14.61□□□□□ -0.07
ERBB2-208ENST00000578630 BEND3Q5T5X7 828 aa14.61□□□□□ -0.07
ERBB2-208ENST00000578630 RBM17Q96I25 401 aaKnown RBP14.61□□□□□ -0.07
ERBB2-208ENST00000578630 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
ERBB2-208ENST00000578630 WWC3Q9ULE0 1092 aa14.61□□□□□ -0.07
ERBB2-208ENST00000578630 PXDNLA1KZ92 1463 aa14.61□□□□□ -0.07
ERBB2-208ENST00000578630 KIF16BQ96L93 1317 aa14.61□□□□□ -0.07
ERBB2-208ENST00000578630 AFDNP55196 1824 aaKnown RBP14.6□□□□□ -0.07
ERBB2-208ENST00000578630 ALDH1L1O75891 902 aa14.6□□□□□ -0.07
ERBB2-208ENST00000578630 SYNE4Q8N205 404 aa14.6□□□□□ -0.07
ERBB2-208ENST00000578630 NRXN2Q9P2S2 1712 aa14.59□□□□□ -0.07
ERBB2-208ENST00000578630 H7C1W4 665 aa14.59□□□□□ -0.07
ERBB2-208ENST00000578630 PDE8AO60658 829 aa14.59□□□□□ -0.07
ERBB2-208ENST00000578630 BCAR3O75815 825 aa14.59□□□□□ -0.07
ERBB2-208ENST00000578630 CRY2Q49AN0 593 aa14.59□□□□□ -0.07
ERBB2-208ENST00000578630 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-208ENST00000578630 YBX3P16989 372 aaKnown RBP eCLIP14.58□□□□□ -0.08
ERBB2-208ENST00000578630 HOXA10P31260 410 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-208ENST00000578630 SF3B3Q15393 1217 aaKnown RBP14.58□□□□□ -0.08
ERBB2-208ENST00000578630 DDX46Q7L014 1031 aaKnown RBP14.58□□□□□ -0.08
ERBB2-208ENST00000578630 JARID2Q92833 1246 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-208ENST00000578630 FRAT1Q92837 279 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-208ENST00000578630 CRAMP1Q96RY5 1269 aa14.58□□□□□ -0.08
ERBB2-208ENST00000578630 TMX4Q9H1E5 349 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-208ENST00000578630 ABCC12Q96J65 1359 aa14.58□□□□□ -0.08
ERBB2-208ENST00000578630 CCT4P50991 539 aaKnown RBP14.57□□□□□ -0.08
ERBB2-208ENST00000578630 SOGA3Q5TF21 947 aa14.57□□□□□ -0.08
ERBB2-208ENST00000578630 ARHGAP27Q6ZUM4 889 aa14.57□□□□□ -0.08
ERBB2-208ENST00000578630 CDHR2Q9BYE9 1310 aa14.57□□□□□ -0.08
ERBB2-208ENST00000578630 KIF13BQ9NQT8 1826 aa14.57□□□□□ -0.08
ERBB2-208ENST00000578630 RIC1Q4ADV7 1423 aa14.57□□□□□ -0.08
ERBB2-208ENST00000578630 GRM8O00222 908 aa14.56□□□□□ -0.08
ERBB2-208ENST00000578630 BBOX1O75936 387 aa14.56□□□□□ -0.08
ERBB2-208ENST00000578630 CCDC152Q4G0S7 254 aa14.56□□□□□ -0.08
ERBB2-208ENST00000578630 ZKSCAN2Q63HK3 967 aa14.56□□□□□ -0.08
ERBB2-208ENST00000578630 ATF7IPQ6VMQ6 1270 aa14.56□□□□□ -0.08
ERBB2-208ENST00000578630 UBE3BQ7Z3V4 1068 aa14.56□□□□□ -0.08
ERBB2-208ENST00000578630 CC2D2BQ6DHV5 1058 aa14.55□□□□□ -0.08
ERBB2-208ENST00000578630 PRPF40BQ6NWY9 871 aaKnown RBP14.55□□□□□ -0.08
ERBB2-208ENST00000578630 C3orf67Q6ZVT6 689 aa14.55□□□□□ -0.08
ERBB2-208ENST00000578630 RCAN3Q9UKA8 241 aa14.55□□□□□ -0.08
ERBB2-208ENST00000578630 HDAC5Q9UQL6 1122 aa14.55□□□□□ -0.08
ERBB2-208ENST00000578630 ARFGEF2Q9Y6D5 1785 aa14.55□□□□□ -0.08
ERBB2-208ENST00000578630 C21orf2O43822 256 aa14.54□□□□□ -0.08
ERBB2-208ENST00000578630 MS4A1P11836 297 aa14.54□□□□□ -0.08
ERBB2-208ENST00000578630 PLA2G12BQ9BX93 195 aa14.54□□□□□ -0.08
ERBB2-208ENST00000578630 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-208ENST00000578630 ANKRD36CQ5JPF3 1778 aa14.53□□□□□ -0.08
ERBB2-208ENST00000578630 N4BP2Q86UW6 1770 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-208ENST00000578630 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
ERBB2-208ENST00000578630 TMC4Q7Z404 712 aa14.53□□□□□ -0.08
ERBB2-208ENST00000578630 TRIM27P14373 513 aa14.52□□□□□ -0.09
ERBB2-208ENST00000578630 CASP7P55210 303 aa14.52□□□□□ -0.09
ERBB2-208ENST00000578630 CTSWP56202 376 aa14.52□□□□□ -0.09
ERBB2-208ENST00000578630 GRAPQ13588 217 aa14.52□□□□□ -0.09
ERBB2-208ENST00000578630 INTS3Q68E01 1043 aaKnown RBP14.52□□□□□ -0.09
ERBB2-208ENST00000578630 RTKN2Q8IZC4 609 aa14.52□□□□□ -0.09
ERBB2-208ENST00000578630 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms