RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 COPS6Q7L5N1 327 aa11.02□□□□□ -0.65
PPP4R1-210ENST00000578557 PSEN1P49768 467 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 DDR1Q08345 913 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 TCIRG1Q13488 830 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 TWISTNBQ3B726 338 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 DALRD3Q5D0E6 543 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 STYK1Q6J9G0 422 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 LRP10Q7Z4F1 713 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 ZNF34Q8IZ26 560 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
PPP4R1-210ENST00000578557 SLC10A5Q5PT55 438 aa11□□□□□ -0.65
PPP4R1-210ENST00000578557 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
PPP4R1-210ENST00000578557 TTLL6Q8N841 843 aa11□□□□□ -0.65
PPP4R1-210ENST00000578557 MASTLQ96GX5 879 aa11□□□□□ -0.65
PPP4R1-210ENST00000578557 TMX4Q9H1E5 349 aaPredicted RBP11□□□□□ -0.65
PPP4R1-210ENST00000578557 ATP10DQ9P241 1426 aa11□□□□□ -0.65
PPP4R1-210ENST00000578557 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 NPR1P16066 1061 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 NEXNQ0ZGT2 675 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 PRR5LQ6MZQ0 368 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 RIC3Q7Z5B4 369 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 XAGE3Q8WTP9 111 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 UTP14AQ9BVJ6 771 aaKnown RBP10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 TMEM106CQ9BVX2 250 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 CHPF2Q9P2E5 772 aa10.99□□□□□ -0.65
PPP4R1-210ENST00000578557 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 TAF1LQ8IZX4 1826 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 A0A0G2JLW4 131 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 DPEP1P16444 411 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 KCNA3P22001 575 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 CCDC191Q8NCU4 936 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 ZNF521Q96K83 1311 aa10.98□□□□□ -0.65
PPP4R1-210ENST00000578557 VAMP4O75379 141 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 POTEIP0CG38 1075 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 SRGNP10124 158 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 HLFQ16534 295 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 KSR2Q6VAB6 950 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 TTLL7Q6ZT98 887 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 C2CD5Q86YS7 1000 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 VPS33BQ9H267 617 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 BCS1LQ9Y276 419 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 RIC1Q4ADV7 1423 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 COL5A3P25940 1745 aaPredicted RBP10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 UBR3Q6ZT12 1888 aa10.97□□□□□ -0.65
PPP4R1-210ENST00000578557 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 SH3TC1Q8TE82 1336 aa10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 FANCIQ9NVI1 1328 aa10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 YY1P25490 414 aa10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 HOXA10P31260 410 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 AIMP1Q12904 312 aaKnown RBP10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 CRY2Q49AN0 593 aa10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 RTKN2Q8IZC4 609 aa10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 RBM17Q96I25 401 aaKnown RBP10.96□□□□□ -0.65
PPP4R1-210ENST00000578557 TJP1Q07157 1748 aa10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 ELL2O00472 640 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 BBOX1O75936 387 aa10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 SLFN5Q08AF3 891 aa10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 ALDH1L2Q3SY69 923 aa10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 ZFP91Q96JP5 570 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 CRAMP1Q96RY5 1269 aa10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 ISCA1Q9BUE6 129 aa10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 TRMT112Q9UI30 125 aaKnown RBP10.95□□□□□ -0.66
PPP4R1-210ENST00000578557 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 ATN1P54259 1190 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 SUSD4Q5VX71 490 aa10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 NLRP10Q86W26 655 aa10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 TRMT2AQ8IZ69 625 aaKnown RBP10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 ZBTB38Q8NAP3 1195 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 RPGRQ92834 1020 aaKnown RBP10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 TSR2Q969E8 191 aaKnown RBP10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 ZNF622Q969S3 477 aaKnown RBP eCLIP10.94□□□□□ -0.664e-11■□□□□ 11.2
PPP4R1-210ENST00000578557 METTL22Q9BUU2 404 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 HDAC5Q9UQL6 1122 aa10.94□□□□□ -0.66
PPP4R1-210ENST00000578557 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 LTBP3Q9NS15 1303 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 NTSR2O95665 410 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 YBX3P16989 372 aaKnown RBP eCLIP10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 EXOSC9Q06265 439 aaKnown RBP10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 KRT24Q2M2I5 525 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 PROSER3Q2NL68 480 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 ARHGAP27Q6ZUM4 889 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 TSPYL6Q8N831 410 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-210ENST00000578557 PTPRCP08575 1304 aa10.92□□□□□ -0.66
PPP4R1-210ENST00000578557 PCCAP05165 728 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms