RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 C11orf16Q9NQ32 467 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 MARK1Q9P0L2 795 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 KCNH4Q9UQ05 1017 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 WFS1O76024 890 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 RPLP1P05386 114 aaKnown RBP4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 PCSK2P16519 638 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 FGFR3P22607 806 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 ARHGAP4P98171 946 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 AAMPQ13685 434 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 ECM1Q16610 540 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 SND1Q7KZF4 910 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 RGL4Q8IZJ4 473 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 GPR161Q8N6U8 529 aaKnown RBP4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 PIK3R5Q8WYR1 880 aa4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 BIN2Q9UBW5 565 aaPredicted RBP4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 NSFL1CQ9UNZ2 370 aaKnown RBP4.02□□□□□ -1.77
PTP4A1-204ENST00000578299 BMP4P12644 408 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 CD33P20138 364 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 MX2P20592 715 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 MZF1P28698 734 aaPredicted RBP4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 USP5P45974 858 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 SFSWAPQ12872 951 aaKnown RBP4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 GAS6Q14393 721 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 TREML4Q6UXN2 200 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 ATCAYQ86WG3 371 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 TTC16Q8NEE8 873 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 GPR152Q8TDT2 470 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 EDEM1Q92611 657 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 COL25A1Q9BXS0 654 aaPredicted RBP4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 GZF1Q9H116 711 aaPredicted RBP4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 EFCC1Q9HA90 598 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 STRN4Q9NRL3 753 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 MBIPQ9NS73 344 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 BRPF3Q9ULD4 1205 aa4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 FNDC3AQ9Y2H6 1198 aaKnown RBP4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 RTCBQ9Y3I0 505 aaKnown RBP4.01□□□□□ -1.77
PTP4A1-204ENST00000578299 NDUFB5O43674 189 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 FZD6O60353 706 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 PDGFAP04085 211 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 MAP2K3P46734 347 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 CTBSQ01459 385 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 DNM1Q05193 864 aaKnown RBP4□□□□□ -1.77
PTP4A1-204ENST00000578299 SPEM2Q0P670 501 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 NEUROD1Q13562 356 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 RNFT1Q5M7Z0 435 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 CMTR1Q8N1G2 835 aaKnown RBP4□□□□□ -1.77
PTP4A1-204ENST00000578299 CITED4Q96RK1 184 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 GSX2Q9BZM3 304 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 HCN2Q9UL51 889 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 POLIQ9UNA4 740 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 USP20Q9Y2K6 914 aa4□□□□□ -1.77
PTP4A1-204ENST00000578299 UBAP1LF5GYI3 381 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 C2CD2LO14523 706 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 XYLBO75191 536 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 EGFRP00533 1210 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 GRNP28799 593 aaKnown RBP3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 GMPRP36959 345 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 EHHADHQ08426 723 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 TRIM26Q12899 539 aaPredicted RBP3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 CCINQ13939 588 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 TRIP4Q15650 581 aaPredicted RBP3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 NUDT16Q96DE0 195 aaKnown RBP3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 PNMA5Q96PV4 448 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 AVENQ9NQS1 362 aaPredicted RBP3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 CCDC87Q9NVE4 849 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 DCTN4Q9UJW0 460 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 PRR12Q9ULL5 1215 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 KCNMB2Q9Y691 235 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 IGF1RP08069 1367 aa3.99□□□□□ -1.77
PTP4A1-204ENST00000578299 ARAFP10398 606 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 ADH6P28332 368 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 MAPK1P28482 360 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 MARSP56192 900 aaKnown RBP3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 KRT76Q01546 638 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 SRSF11Q05519 484 aaKnown RBP3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 PDE3BQ13370 1112 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 GRIN2CQ14957 1233 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 LCE2AQ5TA79 106 aaPredicted RBP3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 LCE2CQ5TA81 110 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 ZNF468Q5VIY5 522 aaPredicted RBP3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 PDE12Q6L8Q7 609 aaKnown RBP3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 XKR5Q6UX68 686 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 NLRP13Q86W25 1043 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 GJD3Q8N144 294 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 CNTNAP3BQ96NU0 1288 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 SLC30A3Q99726 388 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 RBCK1Q9BYM8 510 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 CNTNAP3Q9BZ76 1288 aa3.98□□□□□ -1.77
PTP4A1-204ENST00000578299 SASH3O75995 380 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 MAP3K6O95382 1288 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 ADAMTS2O95450 1211 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 SLURP2P0DP57 97 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 NFKB1P19838 968 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 CCDC27Q2M243 656 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 C8orf34Q49A92 452 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 TMCO4Q5TGY1 634 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 ZNF438Q7Z4V0 828 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 SYT9Q86SS6 491 aa3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 ZSCAN29Q8IWY8 852 aaPredicted RBP3.97□□□□□ -1.77
PTP4A1-204ENST00000578299 BHMTQ93088 406 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms