RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-206	ENST00000578213	DDX60	Q8IY21	1712 aa	Known RBP	28.18	■■■□□ 2.1
PSMD11-206	ENST00000578213	ABCC4	O15439	1325 aa		28.18	■■■□□ 2.1
PSMD11-206	ENST00000578213	NEURL1B	A8MQ27	555 aa		28.17	■■■□□ 2.1
PSMD11-206	ENST00000578213	IGKV5-2	P06315	115 aa		28.17	■■■□□ 2.1
PSMD11-206	ENST00000578213	TRIM27	P14373	513 aa		28.17	■■■□□ 2.1
PSMD11-206	ENST00000578213	BEND3	Q5T5X7	828 aa		28.17	■■■□□ 2.1
PSMD11-206	ENST00000578213	UTP14A	Q9BVJ6	771 aa	Known RBP	28.17	■■■□□ 2.1
PSMD11-206	ENST00000578213	ALDH1L1	O75891	902 aa		28.16	■■■□□ 2.1
PSMD11-206	ENST00000578213	NTSR2	O95665	410 aa		28.16	■■■□□ 2.1
PSMD11-206	ENST00000578213	SUSD4	Q5VX71	490 aa		28.16	■■■□□ 2.1
PSMD11-206	ENST00000578213	SLC4A10	Q6U841	1118 aa		28.16	■■■□□ 2.1
PSMD11-206	ENST00000578213	SRCIN1	Q9C0H9	1055 aa		28.16	■■■□□ 2.1
PSMD11-206	ENST00000578213	DLEC1	Q9Y238	1755 aa		28.15	■■■□□ 2.1
PSMD11-206	ENST00000578213	NPHP1	O15259	732 aa		28.15	■■■□□ 2.1
PSMD11-206	ENST00000578213	MS4A1	P11836	297 aa		28.15	■■■□□ 2.1
PSMD11-206	ENST00000578213	CCT4	P50991	539 aa	Known RBP	28.15	■■■□□ 2.1
PSMD11-206	ENST00000578213	ST5	P78524	1137 aa		28.15	■■■□□ 2.1
PSMD11-206	ENST00000578213	PRR5L	Q6MZQ0	368 aa		28.15	■■■□□ 2.1
PSMD11-206	ENST00000578213	CWF19L2	Q2TBE0	894 aa	Known RBP	28.13	■■■□□ 2.09
PSMD11-206	ENST00000578213	TRMT112	Q9UI30	125 aa	Known RBP	28.13	■■■□□ 2.09
PSMD11-206	ENST00000578213	SH3TC1	Q8TE82	1336 aa		28.13	■■■□□ 2.09
PSMD11-206	ENST00000578213	KIAA1551	Q9HCM1	1747 aa		28.12	■■■□□ 2.09
PSMD11-206	ENST00000578213	GTF2E1	P29083	439 aa	Predicted RBP	28.12	■■■□□ 2.09
PSMD11-206	ENST00000578213	GCKR	Q14397	625 aa		28.12	■■■□□ 2.09
PSMD11-206	ENST00000578213	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.12	■■■□□ 2.09
PSMD11-206	ENST00000578213	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.12	■■■□□ 2.09
PSMD11-206	ENST00000578213	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.11	■■■□□ 2.09
PSMD11-206	ENST00000578213	PCCA	P05165	728 aa	Predicted RBP	28.11	■■■□□ 2.09
PSMD11-206	ENST00000578213	HSP90B1	P14625	803 aa	Known RBP	28.11	■■■□□ 2.09
PSMD11-206	ENST00000578213	FTSJ3	Q8IY81	847 aa	Known RBP	28.11	■■■□□ 2.09
PSMD11-206	ENST00000578213	CD2AP	Q9Y5K6	639 aa		28.11	■■■□□ 2.09
PSMD11-206	ENST00000578213	FAM177B	A6PVY3	158 aa		28.1	■■■□□ 2.09
PSMD11-206	ENST00000578213	INTS3	Q68E01	1043 aa	Known RBP	28.1	■■■□□ 2.09
PSMD11-206	ENST00000578213	BRCA1	P38398	1863 aa	Known RBP	28.09	■■■□□ 2.09
PSMD11-206	ENST00000578213	DZIP1L	Q8IYY4	767 aa	Known RBP	28.09	■■■□□ 2.09
PSMD11-206	ENST00000578213	BRIP1	Q9BX63	1249 aa		28.09	■■■□□ 2.09
PSMD11-206	ENST00000578213	PDZRN3	Q9UPQ7	1066 aa		28.09	■■■□□ 2.09
PSMD11-206	ENST00000578213	CDHR2	Q9BYE9	1310 aa		28.09	■■■□□ 2.09
PSMD11-206	ENST00000578213	COL11A2	P13942	1736 aa	Predicted RBP	28.09	■■■□□ 2.09
PSMD11-206	ENST00000578213	ABCC12	Q96J65	1359 aa		28.08	■■■□□ 2.09
PSMD11-206	ENST00000578213	SRCAP	Q6ZRS2	3230 aa		28.08	■■■□□ 2.09
PSMD11-206	ENST00000578213	SLC10A5	Q5PT55	438 aa		28.07	■■■□□ 2.08
PSMD11-206	ENST00000578213	NUTM1	Q86Y26	1132 aa		28.07	■■■□□ 2.08
PSMD11-206	ENST00000578213	GRM8	O00222	908 aa		28.06	■■■□□ 2.08
PSMD11-206	ENST00000578213	ERFE	Q4G0M1	354 aa		28.06	■■■□□ 2.08
PSMD11-206	ENST00000578213	CLUAP1	Q96AJ1	413 aa		28.06	■■■□□ 2.08
PSMD11-206	ENST00000578213		H7C1W4	665 aa		28.05	■■■□□ 2.08
PSMD11-206	ENST00000578213	PDE6B	P35913	854 aa		28.05	■■■□□ 2.08
PSMD11-206	ENST00000578213	PDE3A	Q14432	1141 aa		28.05	■■■□□ 2.08
PSMD11-206	ENST00000578213	FAM89A	Q96GI7	184 aa		28.05	■■■□□ 2.08
PSMD11-206	ENST00000578213	UTY	O14607	1347 aa		28.04	■■■□□ 2.08
PSMD11-206	ENST00000578213	RRP1	P56182	461 aa	Known RBP	28.04	■■■□□ 2.08
PSMD11-206	ENST00000578213	TGFB2	P61812	414 aa		28.04	■■■□□ 2.08
PSMD11-206	ENST00000578213	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.04	■■■□□ 2.08
PSMD11-206	ENST00000578213	UBE3B	Q7Z3V4	1068 aa		28.03	■■■□□ 2.08
PSMD11-206	ENST00000578213	TNN	Q9UQP3	1299 aa		28.03	■■■□□ 2.08
PSMD11-206	ENST00000578213	KLRG2	A4D1S0	409 aa	Predicted RBP	28.02	■■■□□ 2.08
PSMD11-206	ENST00000578213	IRS4	O14654	1257 aa	Predicted RBP	28.02	■■■□□ 2.08
PSMD11-206	ENST00000578213	TMEM57	Q8N5G2	664 aa		28.02	■■■□□ 2.08
PSMD11-206	ENST00000578213	CACNA1S	Q13698	1873 aa		28.02	■■■□□ 2.08
PSMD11-206	ENST00000578213	CASP7	P55210	303 aa		28.01	■■■□□ 2.07
PSMD11-206	ENST00000578213	NLRP3	Q96P20	1036 aa		28.01	■■■□□ 2.07
PSMD11-206	ENST00000578213	FHDC1	Q9C0D6	1143 aa	Predicted RBP	28.01	■■■□□ 2.07
PSMD11-206	ENST00000578213	PLIN1	O60240	522 aa		28	■■■□□ 2.07
PSMD11-206	ENST00000578213	CENPB	P07199	599 aa	Predicted RBP	28	■■■□□ 2.07
PSMD11-206	ENST00000578213	RLBP1	P12271	317 aa		28	■■■□□ 2.07
PSMD11-206	ENST00000578213	PLA2G12B	Q9BX93	195 aa		28	■■■□□ 2.07
PSMD11-206	ENST00000578213	HDAC5	Q9UQL6	1122 aa		28	■■■□□ 2.07
PSMD11-206	ENST00000578213	CRY2	Q49AN0	593 aa		27.99	■■■□□ 2.07
PSMD11-206	ENST00000578213	KLHL34	Q8N239	644 aa		27.99	■■■□□ 2.07
PSMD11-206	ENST00000578213	CCDC24	Q8N4L8	307 aa		27.99	■■■□□ 2.07
PSMD11-206	ENST00000578213	USP44	Q9H0E7	712 aa		27.99	■■■□□ 2.07
PSMD11-206	ENST00000578213	PDE8A	O60658	829 aa		27.98	■■■□□ 2.07
PSMD11-206	ENST00000578213	RTL5	Q5HYW3	569 aa	Predicted RBP	27.98	■■■□□ 2.07
PSMD11-206	ENST00000578213	SYNE4	Q8N205	404 aa		27.98	■■■□□ 2.07
PSMD11-206	ENST00000578213	GNAI3	P08754	354 aa		27.97	■■■□□ 2.07
PSMD11-206	ENST00000578213	HCLS1	P14317	486 aa	Predicted RBP	27.97	■■■□□ 2.07
PSMD11-206	ENST00000578213	ITPRIP	Q8IWB1	547 aa		27.97	■■■□□ 2.07
PSMD11-206	ENST00000578213	PANK1	Q8TE04	598 aa		27.97	■■■□□ 2.07
PSMD11-206	ENST00000578213	ARFGEF1	Q9Y6D6	1849 aa		27.97	■■■□□ 2.07
PSMD11-206	ENST00000578213		H0YIN7	160 aa		27.96	■■■□□ 2.07
PSMD11-206	ENST00000578213	SYT17	Q9BSW7	474 aa		27.96	■■■□□ 2.07
PSMD11-206	ENST00000578213	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.95	■■■□□ 2.06
PSMD11-206	ENST00000578213	UBTFL1	P0CB47	393 aa	Predicted RBP	27.95	■■■□□ 2.06
PSMD11-206	ENST00000578213	MVP	Q14764	893 aa	Known RBP	27.95	■■■□□ 2.06
PSMD11-206	ENST00000578213	SF3B3	Q15393	1217 aa	Known RBP	27.95	■■■□□ 2.06
PSMD11-206	ENST00000578213	CHMP4B	Q9H444	224 aa	Known RBP	27.95	■■■□□ 2.06
PSMD11-206	ENST00000578213	SRGN	P10124	158 aa		27.94	■■■□□ 2.06
PSMD11-206	ENST00000578213	C2CD5	Q86YS7	1000 aa		27.94	■■■□□ 2.06
PSMD11-206	ENST00000578213	DDX19B	Q9UMR2	479 aa		27.94	■■■□□ 2.06
PSMD11-206	ENST00000578213	NPR1	P16066	1061 aa		27.93	■■■□□ 2.06
PSMD11-206	ENST00000578213	CTSW	P56202	376 aa		27.93	■■■□□ 2.06
PSMD11-206	ENST00000578213	STYK1	Q6J9G0	422 aa		27.93	■■■□□ 2.06
PSMD11-206	ENST00000578213	JARID2	Q92833	1246 aa	Predicted RBP	27.93	■■■□□ 2.06
PSMD11-206	ENST00000578213	MASTL	Q96GX5	879 aa		27.93	■■■□□ 2.06
PSMD11-206	ENST00000578213	RTL9	Q8NET4	1388 aa		27.93	■■■□□ 2.06
PSMD11-206	ENST00000578213	TAF1	P21675	1872 aa		27.92	■■■□□ 2.06
PSMD11-206	ENST00000578213	CCDC152	Q4G0S7	254 aa		27.92	■■■□□ 2.06
PSMD11-206	ENST00000578213	RPGR	Q92834	1020 aa	Known RBP	27.92	■■■□□ 2.06
PSMD11-206	ENST00000578213	MEIS3	Q99687	375 aa		27.92	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms