RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 ANKRD36CQ5JPF3 1778 aa16.57■□□□□ 0.24
CCDC57-211ENST00000578187 PRELPP51888 382 aa16.56■□□□□ 0.24
CCDC57-211ENST00000578187 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
CCDC57-211ENST00000578187 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-211ENST00000578187 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
CCDC57-211ENST00000578187 MIER1Q8N108 512 aa16.55■□□□□ 0.24
CCDC57-211ENST00000578187 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
CCDC57-211ENST00000578187 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
CCDC57-211ENST00000578187 IBTKQ9P2D0 1353 aaPredicted RBP16.54■□□□□ 0.24
CCDC57-211ENST00000578187 ZNF521Q96K83 1311 aa16.54■□□□□ 0.24
CCDC57-211ENST00000578187 PDIA6Q15084 440 aa16.54■□□□□ 0.24
CCDC57-211ENST00000578187 PPP1R42Q7Z4L9 355 aa16.54■□□□□ 0.24
CCDC57-211ENST00000578187 WDR63Q8IWG1 891 aa16.54■□□□□ 0.24
CCDC57-211ENST00000578187 EIF2S2P20042 333 aaKnown RBP16.53■□□□□ 0.24
CCDC57-211ENST00000578187 FKBP4Q02790 459 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC57-211ENST00000578187 DUSP27Q5VZP5 1158 aa16.53■□□□□ 0.24
CCDC57-211ENST00000578187 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
CCDC57-211ENST00000578187 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-211ENST00000578187 CACNA1FO60840 1977 aa16.52■□□□□ 0.24
CCDC57-211ENST00000578187 IQCA1LA6NCM1 817 aa16.52■□□□□ 0.24
CCDC57-211ENST00000578187 GPTP24298 496 aa16.52■□□□□ 0.24
CCDC57-211ENST00000578187 PROSER3Q2NL68 480 aa16.52■□□□□ 0.24
CCDC57-211ENST00000578187 PARP10Q53GL7 1025 aa16.52■□□□□ 0.24
CCDC57-211ENST00000578187 HDGFL1Q5TGJ6 251 aa16.52■□□□□ 0.24
CCDC57-211ENST00000578187 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
CCDC57-211ENST00000578187 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
CCDC57-211ENST00000578187 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.24
CCDC57-211ENST00000578187 TMX4Q9H1E5 349 aaPredicted RBP16.52■□□□□ 0.24
CCDC57-211ENST00000578187 FANCIQ9NVI1 1328 aa16.51■□□□□ 0.23
CCDC57-211ENST00000578187 GRIPAP1Q4V328 841 aa16.51■□□□□ 0.23
CCDC57-211ENST00000578187 C8orf58Q8NAV2 365 aa16.51■□□□□ 0.23
CCDC57-211ENST00000578187 C7orf43Q8WVR3 580 aa16.51■□□□□ 0.23
CCDC57-211ENST00000578187 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC57-211ENST00000578187 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
CCDC57-211ENST00000578187 CRY2Q49AN0 593 aa16.5■□□□□ 0.23
CCDC57-211ENST00000578187 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
CCDC57-211ENST00000578187 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
CCDC57-211ENST00000578187 DNAJC5GQ8N7S2 189 aa16.5■□□□□ 0.23
CCDC57-211ENST00000578187 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
CCDC57-211ENST00000578187 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
CCDC57-211ENST00000578187 CHPF2Q9P2E5 772 aa16.5■□□□□ 0.23
CCDC57-211ENST00000578187 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
CCDC57-211ENST00000578187 ANXA1P04083 346 aa16.49■□□□□ 0.23
CCDC57-211ENST00000578187 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
CCDC57-211ENST00000578187 ZNF34Q8IZ26 560 aa16.49■□□□□ 0.23
CCDC57-211ENST00000578187 KLRG1Q96E93 195 aa16.49■□□□□ 0.23
CCDC57-211ENST00000578187 RNF123Q5XPI4 1314 aa16.48■□□□□ 0.23
CCDC57-211ENST00000578187 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
CCDC57-211ENST00000578187 DDNO94850 711 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-211ENST00000578187 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
CCDC57-211ENST00000578187 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
CCDC57-211ENST00000578187 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
CCDC57-211ENST00000578187 NLRP3Q96P20 1036 aa16.48■□□□□ 0.23
CCDC57-211ENST00000578187 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-211ENST00000578187 ZNF277Q9NRM2 450 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-211ENST00000578187 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-211ENST00000578187 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
CCDC57-211ENST00000578187 IARSP41252 1262 aaKnown RBP16.47■□□□□ 0.23
CCDC57-211ENST00000578187 PSMD1Q99460 953 aa16.47■□□□□ 0.23
CCDC57-211ENST00000578187 UTP14AQ9BVJ6 771 aaKnown RBP16.47■□□□□ 0.23
CCDC57-211ENST00000578187 POTECB2RU33 542 aa16.46■□□□□ 0.23
CCDC57-211ENST00000578187 NTSR2O95665 410 aa16.46■□□□□ 0.23
CCDC57-211ENST00000578187 HOXA10P31260 410 aaPredicted RBP16.46■□□□□ 0.23
CCDC57-211ENST00000578187 HTRA3P83110 453 aa16.46■□□□□ 0.23
CCDC57-211ENST00000578187 AIMP1Q12904 312 aaKnown RBP16.46■□□□□ 0.23
CCDC57-211ENST00000578187 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
CCDC57-211ENST00000578187 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
CCDC57-211ENST00000578187 CRAMP1Q96RY5 1269 aa16.46■□□□□ 0.23
CCDC57-211ENST00000578187 SCN4AP35499 1836 aa16.46■□□□□ 0.23
CCDC57-211ENST00000578187 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-211ENST00000578187 GOLGA2Q08379 1002 aa16.45■□□□□ 0.22
CCDC57-211ENST00000578187 TWISTNBQ3B726 338 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-211ENST00000578187 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
CCDC57-211ENST00000578187 COPS6Q7L5N1 327 aa16.45■□□□□ 0.22
CCDC57-211ENST00000578187 XAGE3Q8WTP9 111 aa16.45■□□□□ 0.22
CCDC57-211ENST00000578187 L3MBTL3Q96JM7 780 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-211ENST00000578187 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
CCDC57-211ENST00000578187 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
CCDC57-211ENST00000578187 HYPKQ9NX55 129 aa16.45■□□□□ 0.22
CCDC57-211ENST00000578187 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
CCDC57-211ENST00000578187 OLFM4Q6UX06 510 aa16.44■□□□□ 0.22
CCDC57-211ENST00000578187 LDHDQ86WU2 507 aa16.44■□□□□ 0.22
CCDC57-211ENST00000578187 EIF6P56537 245 aaKnown RBP16.43■□□□□ 0.22
CCDC57-211ENST00000578187 HACL1Q9UJ83 578 aa16.43■□□□□ 0.22
CCDC57-211ENST00000578187 LAMB2P55268 1798 aa16.42■□□□□ 0.22
CCDC57-211ENST00000578187 FZD9O00144 591 aa16.42■□□□□ 0.22
CCDC57-211ENST00000578187 EXOSC9Q06265 439 aaKnown RBP16.42■□□□□ 0.22
CCDC57-211ENST00000578187 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
CCDC57-211ENST00000578187 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
CCDC57-211ENST00000578187 GPC2Q8N158 579 aa16.42■□□□□ 0.22
CCDC57-211ENST00000578187 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
CCDC57-211ENST00000578187 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
CCDC57-211ENST00000578187 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
CCDC57-211ENST00000578187 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
CCDC57-211ENST00000578187 EAPPQ56P03 285 aaPredicted RBP16.41■□□□□ 0.22
CCDC57-211ENST00000578187 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
CCDC57-211ENST00000578187 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
CCDC57-211ENST00000578187 PLBD2Q8NHP8 589 aa16.41■□□□□ 0.22
CCDC57-211ENST00000578187 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
CCDC57-211ENST00000578187 TRMT112Q9UI30 125 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms