RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 LAMB2P55268 1798 aa14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 DICER1Q9UPY3 1922 aaKnown RBP14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 ZC3H4Q9UPT8 1303 aaKnown RBP14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 LMNB1P20700 586 aa14.12□□□□□ -0.15
PPP4R1-208ENST00000578178 TCIRG1Q13488 830 aa14.12□□□□□ -0.15
PPP4R1-208ENST00000578178 NLRP10Q86W26 655 aa14.12□□□□□ -0.15
PPP4R1-208ENST00000578178 UTP14AQ9BVJ6 771 aaKnown RBP14.12□□□□□ -0.15
PPP4R1-208ENST00000578178 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
PPP4R1-208ENST00000578178 LTBP3Q9NS15 1303 aa14.12□□□□□ -0.15
PPP4R1-208ENST00000578178 GOLGA2Q08379 1002 aa14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 CCDC30Q5VVM6 783 aa14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 ANKRD13DQ6ZTN6 518 aa14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 WDR63Q8IWG1 891 aa14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 TSPYL6Q8N831 410 aa14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 TAOK3Q9H2K8 898 aa14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 SALL2Q9Y467 1007 aaPredicted RBP14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
PPP4R1-208ENST00000578178 DDX60Q8IY21 1712 aaKnown RBP14.1□□□□□ -0.15
PPP4R1-208ENST00000578178 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
PPP4R1-208ENST00000578178 PRELPP51888 382 aa14.1□□□□□ -0.15
PPP4R1-208ENST00000578178 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
PPP4R1-208ENST00000578178 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
PPP4R1-208ENST00000578178 C1QTNF8P60827 252 aa14.09□□□□□ -0.15
PPP4R1-208ENST00000578178 TWISTNBQ3B726 338 aaPredicted RBP14.09□□□□□ -0.15
PPP4R1-208ENST00000578178 C7orf43Q8WVR3 580 aa14.09□□□□□ -0.15
PPP4R1-208ENST00000578178 ISCA1Q9BUE6 129 aa14.09□□□□□ -0.15
PPP4R1-208ENST00000578178 PHAXQ9H814 394 aaKnown RBP14.09□□□□□ -0.15
PPP4R1-208ENST00000578178 SH3TC1Q8TE82 1336 aa14.09□□□□□ -0.15
PPP4R1-208ENST00000578178 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
PPP4R1-208ENST00000578178 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-208ENST00000578178 SLC10A5Q5PT55 438 aa14.08□□□□□ -0.16
PPP4R1-208ENST00000578178 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
PPP4R1-208ENST00000578178 NLRP3Q96P20 1036 aa14.08□□□□□ -0.16
PPP4R1-208ENST00000578178 STK31Q9BXU1 1019 aa14.08□□□□□ -0.16
PPP4R1-208ENST00000578178 TRMT112Q9UI30 125 aaKnown RBP14.08□□□□□ -0.16
PPP4R1-208ENST00000578178 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
PPP4R1-208ENST00000578178 SNED1Q8TER0 1413 aa14.07□□□□□ -0.16
PPP4R1-208ENST00000578178 KIF3CO14782 793 aa14.07□□□□□ -0.16
PPP4R1-208ENST00000578178 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-208ENST00000578178 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
PPP4R1-208ENST00000578178 RBM17Q96I25 401 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-208ENST00000578178 ATP5J2-PTCD1G3V325 749 aa14.06□□□□□ -0.16
PPP4R1-208ENST00000578178 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
PPP4R1-208ENST00000578178 TRIM28Q13263 835 aaKnown RBP14.06□□□□□ -0.16
PPP4R1-208ENST00000578178 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
PPP4R1-208ENST00000578178 PPEF1O14829 653 aaPredicted RBP14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 OLFM4Q6UX06 510 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 RTKN2Q8IZC4 609 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 SYNE4Q8N205 404 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 NMRK2Q9NPI5 230 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 ABCC4O15439 1325 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 ZNF521Q96K83 1311 aa14.05□□□□□ -0.16
PPP4R1-208ENST00000578178 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
PPP4R1-208ENST00000578178 TCERG1O14776 1098 aaKnown RBP14.04□□□□□ -0.16
PPP4R1-208ENST00000578178 ZNF428Q96B54 188 aa14.04□□□□□ -0.16
PPP4R1-208ENST00000578178 MYD88Q99836 296 aa14.04□□□□□ -0.16
PPP4R1-208ENST00000578178 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-208ENST00000578178 LRRC37AA6NMS7 1700 aa14.04□□□□□ -0.16
PPP4R1-208ENST00000578178 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
PPP4R1-208ENST00000578178 GLTPD2A6NH11 291 aa14.03□□□□□ -0.16
PPP4R1-208ENST00000578178 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
PPP4R1-208ENST00000578178 FAM89AQ96GI7 184 aa14.03□□□□□ -0.16
PPP4R1-208ENST00000578178 METTL22Q9BUU2 404 aaPredicted RBP14.03□□□□□ -0.16
PPP4R1-208ENST00000578178 TAF1P21675 1872 aa14.02□□□□□ -0.16
PPP4R1-208ENST00000578178 GRIPAP1Q4V328 841 aa14.02□□□□□ -0.17
PPP4R1-208ENST00000578178 KSR2Q6VAB6 950 aa14.02□□□□□ -0.17
PPP4R1-208ENST00000578178 ZBTB38Q8NAP3 1195 aaPredicted RBP14.02□□□□□ -0.17
PPP4R1-208ENST00000578178 CCDC191Q8NCU4 936 aa14.02□□□□□ -0.17
PPP4R1-208ENST00000578178 PSMD1Q99460 953 aa14.02□□□□□ -0.17
PPP4R1-208ENST00000578178 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.17
PPP4R1-208ENST00000578178 MAP3K2Q9Y2U5 619 aa14.02□□□□□ -0.17
PPP4R1-208ENST00000578178 PI4KAP2A4QPH2 592 aa14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 IRS4O14654 1257 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 VAMP4O75379 141 aa14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 FLIIQ13045 1269 aa14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 GRAPQ13588 217 aa14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 G2E3Q7L622 706 aa14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 PI4KAP1Q8N8J0 262 aa14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 GRAPLQ8TC17 118 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 CWC25Q9NXE8 425 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-208ENST00000578178 MYH3P11055 1940 aa14□□□□□ -0.17
PPP4R1-208ENST00000578178 TOMM70O94826 608 aa14□□□□□ -0.17
PPP4R1-208ENST00000578178 HSP90B1P14625 803 aaKnown RBP14□□□□□ -0.17
PPP4R1-208ENST00000578178 IARSP41252 1262 aaKnown RBP14□□□□□ -0.17
PPP4R1-208ENST00000578178 NEXNQ0ZGT2 675 aa14□□□□□ -0.17
PPP4R1-208ENST00000578178 RTL5Q5HYW3 569 aaPredicted RBP14□□□□□ -0.17
PPP4R1-208ENST00000578178 DPY19L2Q6NUT2 758 aa14□□□□□ -0.17
PPP4R1-208ENST00000578178 SLC51AQ86UW1 340 aa14□□□□□ -0.17
PPP4R1-208ENST00000578178 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
PPP4R1-208ENST00000578178 TMX4Q9H1E5 349 aaPredicted RBP14□□□□□ -0.17
PPP4R1-208ENST00000578178 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
PPP4R1-208ENST00000578178 COL4A5P29400 1685 aa13.99□□□□□ -0.17
PPP4R1-208ENST00000578178 BBOX1O75936 387 aa13.99□□□□□ -0.17
PPP4R1-208ENST00000578178 PCCAP05165 728 aaPredicted RBP13.99□□□□□ -0.17
PPP4R1-208ENST00000578178 FKBP5Q13451 457 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms