RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.03
SMARCE1-214ENST00000578112 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.03
SMARCE1-214ENST00000578112 CTCFP49711 727 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-214ENST00000578112 SLC10A5Q5PT55 438 aa14.83□□□□□ -0.04
SMARCE1-214ENST00000578112 AIDAQ96BJ3 306 aa14.83□□□□□ -0.04
SMARCE1-214ENST00000578112 CDHR2Q9BYE9 1310 aa14.83□□□□□ -0.04
SMARCE1-214ENST00000578112 ABCC12Q96J65 1359 aa14.82□□□□□ -0.04
SMARCE1-214ENST00000578112 HSP90AB3PQ58FF7 597 aa14.82□□□□□ -0.04
SMARCE1-214ENST00000578112 GIGYF2Q6Y7W6 1299 aaKnown RBP14.82□□□□□ -0.04
SMARCE1-214ENST00000578112 ZNF277Q9NRM2 450 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-214ENST00000578112 MAPK8IP3Q9UPT6 1336 aa14.82□□□□□ -0.04
SMARCE1-214ENST00000578112 TMX4Q9H1E5 349 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-214ENST00000578112 LMOD1P29536 600 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-214ENST00000578112 DCTN1Q14203 1278 aa14.81□□□□□ -0.04
SMARCE1-214ENST00000578112 USP50Q70EL3 339 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-214ENST00000578112 TMC4Q7Z404 712 aa14.81□□□□□ -0.04
SMARCE1-214ENST00000578112 NTSR2O95665 410 aa14.8□□□□□ -0.04
SMARCE1-214ENST00000578112 PIP4K2AP48426 406 aaPredicted RBP14.8□□□□□ -0.04
SMARCE1-214ENST00000578112 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
SMARCE1-214ENST00000578112 PPEF1O14829 653 aaPredicted RBP14.8□□□□□ -0.04
SMARCE1-214ENST00000578112 RTFDC1Q9BY42 306 aaPredicted RBP14.8□□□□□ -0.04
SMARCE1-214ENST00000578112 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
SMARCE1-214ENST00000578112 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
SMARCE1-214ENST00000578112 MAP2K1Q02750 393 aaPredicted RBP14.79□□□□□ -0.04
SMARCE1-214ENST00000578112 RALBP1Q15311 655 aa14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 CNTROBQ8N137 903 aa14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 NLRP3Q96P20 1036 aa14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 MKRN1Q9UHC7 482 aaKnown RBP14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 UBN2Q6ZU65 1347 aa14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 ECE1P42892 770 aa14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 WBP1LQ9NX94 342 aa14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 CLEC11AQ9Y240 323 aa14.78□□□□□ -0.04
SMARCE1-214ENST00000578112 BBOX1O75936 387 aa14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 DEFB115Q30KQ5 88 aa14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 EAPPQ56P03 285 aaPredicted RBP14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 SUSD4Q5VX71 490 aa14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 NIM1KQ8IY84 436 aa14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 UTP14AQ9BVJ6 771 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 ATP6V0A2Q9Y487 856 aa14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 LTBP1Q14766 1721 aa14.77□□□□□ -0.04
SMARCE1-214ENST00000578112 GOLGB1Q14789 3259 aaKnown RBP14.77□□□□□ -0.05
SMARCE1-214ENST00000578112 LRRC37AA6NMS7 1700 aa14.77□□□□□ -0.05
SMARCE1-214ENST00000578112 VEGFBP49765 207 aa14.77□□□□□ -0.05
SMARCE1-214ENST00000578112 TTLL7Q6ZT98 887 aa14.77□□□□□ -0.05
SMARCE1-214ENST00000578112 HOXB7P09629 217 aa14.76□□□□□ -0.05
SMARCE1-214ENST00000578112 LRP10Q7Z4F1 713 aa14.76□□□□□ -0.05
SMARCE1-214ENST00000578112 LARGE2Q8N3Y3 721 aa14.76□□□□□ -0.05
SMARCE1-214ENST00000578112 HHIPL1Q96JK4 782 aa14.76□□□□□ -0.05
SMARCE1-214ENST00000578112 LAMB2P55268 1798 aa14.76□□□□□ -0.05
SMARCE1-214ENST00000578112 TSPYL4Q9UJ04 414 aa14.76□□□□□ -0.05
SMARCE1-214ENST00000578112 RRP7AQ9Y3A4 280 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-214ENST00000578112 DDX60Q8IY21 1712 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 FOXN1O15353 648 aa14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 DDX21Q9NR30 783 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 COL4A5P29400 1685 aa14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 NUTM1Q86Y26 1132 aa14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 ADARB2Q9NS39 739 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-214ENST00000578112 WDR33Q9C0J8 1336 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-214ENST00000578112 FAM177BA6PVY3 158 aa14.74□□□□□ -0.05
SMARCE1-214ENST00000578112 ZC3H15Q8WU90 426 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-214ENST00000578112 MIS18AQ9NYP9 233 aa14.74□□□□□ -0.05
SMARCE1-214ENST00000578112 PGAP2Q9UHJ9 254 aa14.74□□□□□ -0.05
SMARCE1-214ENST00000578112 SCNN1DP51172 638 aa14.74□□□□□ -0.05
SMARCE1-214ENST00000578112 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
SMARCE1-214ENST00000578112 MYL6BP14649 208 aa14.73□□□□□ -0.05
SMARCE1-214ENST00000578112 PDIA6Q15084 440 aa14.73□□□□□ -0.05
SMARCE1-214ENST00000578112 ZNRF3Q9ULT6 936 aa14.73□□□□□ -0.05
SMARCE1-214ENST00000578112 CA12O43570 354 aa14.73□□□□□ -0.05
SMARCE1-214ENST00000578112 TNIP1Q15025 636 aa14.73□□□□□ -0.05
SMARCE1-214ENST00000578112 PPIP5K2O43314 1243 aa14.72□□□□□ -0.05
SMARCE1-214ENST00000578112 MAP2K2P36507 400 aa14.72□□□□□ -0.05
SMARCE1-214ENST00000578112 OLFM4Q6UX06 510 aa14.72□□□□□ -0.05
SMARCE1-214ENST00000578112 GPRC5DQ9NZD1 345 aa14.72□□□□□ -0.05
SMARCE1-214ENST00000578112 TLL2Q9Y6L7 1015 aa14.72□□□□□ -0.05
SMARCE1-214ENST00000578112 ABCC4O15439 1325 aa14.72□□□□□ -0.05
SMARCE1-214ENST00000578112 GPTP24298 496 aa14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 KIAA2012Q0VF49 1180 aa14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 HSPA8P11142 646 aaKnown RBP14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 RIPK4P57078 832 aa14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 TCIRG1Q13488 830 aa14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 MAP1SQ66K74 1059 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 NGEFQ8N5V2 710 aa14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 GJA3Q9Y6H8 435 aa14.71□□□□□ -0.05
SMARCE1-214ENST00000578112 HSP90B1P14625 803 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 TMPOP42166 694 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 GRAPQ13588 217 aa14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 NLRP10Q86W26 655 aa14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 GRAPLQ8TC17 118 aaPredicted RBP14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 SH3TC1Q8TE82 1336 aa14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 DDX46Q7L014 1031 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 CHMP4AQ9BY43 222 aa14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 ABT1Q9ULW3 272 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-214ENST00000578112 ZNF609O15014 1411 aa14.69□□□□□ -0.06
SMARCE1-214ENST00000578112 CIAPIN1Q6FI81 312 aa14.69□□□□□ -0.06
SMARCE1-214ENST00000578112 DPP8Q6V1X1 898 aaPredicted RBP14.69□□□□□ -0.06
SMARCE1-214ENST00000578112 MPNDQ8N594 471 aa14.69□□□□□ -0.06
SMARCE1-214ENST00000578112 CEP350Q5VT06 3117 aa14.69□□□□□ -0.06
SMARCE1-214ENST00000578112 CHL1O00533 1208 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms