RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 PCDHB15Q9Y5E8 787 aa8.42□□□□□ -1.06
KRT39-203ENST00000578078 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
KRT39-203ENST00000578078 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
KRT39-203ENST00000578078 CLGNO14967 610 aa8.41□□□□□ -1.06
KRT39-203ENST00000578078 NPHP4O75161 1426 aaPredicted RBP8.41□□□□□ -1.06
KRT39-203ENST00000578078 HMOX1P09601 288 aa8.41□□□□□ -1.06
KRT39-203ENST00000578078 SSFA2P28290 1259 aa8.41□□□□□ -1.06
KRT39-203ENST00000578078 RAB3GAP1Q15042 981 aa8.41□□□□□ -1.06
KRT39-203ENST00000578078 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
KRT39-203ENST00000578078 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
KRT39-203ENST00000578078 PMFBP1Q8TBY8 1022 aa8.41□□□□□ -1.06
KRT39-203ENST00000578078 PPP1R1BQ9UD71 204 aaPredicted RBP8.41□□□□□ -1.06
KRT39-203ENST00000578078 MARF1Q9Y4F3 1742 aaKnown RBP8.41□□□□□ -1.06
KRT39-203ENST00000578078 NWD1Q149M9 1564 aa8.41□□□□□ -1.06
KRT39-203ENST00000578078 ATP9BO43861 1147 aa8.4□□□□□ -1.06
KRT39-203ENST00000578078 CD46P15529 392 aa8.4□□□□□ -1.06
KRT39-203ENST00000578078 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
KRT39-203ENST00000578078 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
KRT39-203ENST00000578078 HSCBQ8IWL3 235 aa8.4□□□□□ -1.06
KRT39-203ENST00000578078 TSR2Q969E8 191 aaKnown RBP8.4□□□□□ -1.06
KRT39-203ENST00000578078 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
KRT39-203ENST00000578078 ADGRL3Q9HAR2 1447 aa8.4□□□□□ -1.07
KRT39-203ENST00000578078 ANKRD62A6NC57 917 aa8.4□□□□□ -1.07
KRT39-203ENST00000578078 ANKRD33BA6NCL7 494 aa8.4□□□□□ -1.07
KRT39-203ENST00000578078 PRKAR2AP13861 404 aaKnown RBP8.4□□□□□ -1.07
KRT39-203ENST00000578078 EXOSC9Q06265 439 aaKnown RBP8.4□□□□□ -1.07
KRT39-203ENST00000578078 PADI6Q6TGC4 694 aa8.4□□□□□ -1.07
KRT39-203ENST00000578078 GAS2L3Q86XJ1 694 aa8.4□□□□□ -1.07
KRT39-203ENST00000578078 RBM33Q96EV2 1170 aaKnown RBP8.4□□□□□ -1.07
KRT39-203ENST00000578078 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
KRT39-203ENST00000578078 LTN1O94822 1766 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 SBNO1A3KN83 1393 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 FLT4P35916 1363 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 RECKO95980 971 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 NDUFV2P19404 249 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 GNAI1P63096 354 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 ZKSCAN2Q63HK3 967 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 PANK1Q8TE04 598 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 PHACTR3Q96KR7 559 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 EFCC1Q9HA90 598 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 SMC4Q9NTJ3 1288 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 GEMIN8Q9NWZ8 242 aaKnown RBP8.39□□□□□ -1.07
KRT39-203ENST00000578078 CALCOCO1Q9P1Z2 691 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 ARHGEF10O15013 1369 aa8.39□□□□□ -1.07
KRT39-203ENST00000578078 TULP2O00295 520 aa8.38□□□□□ -1.07
KRT39-203ENST00000578078 KIAA2012Q0VF49 1180 aa8.38□□□□□ -1.07
KRT39-203ENST00000578078 EIF4A2Q14240 407 aaKnown RBP8.38□□□□□ -1.07
KRT39-203ENST00000578078 IFT57Q9NWB7 429 aa8.38□□□□□ -1.07
KRT39-203ENST00000578078 OGFRQ9NZT2 677 aa8.38□□□□□ -1.07
KRT39-203ENST00000578078 KIF16BQ96L93 1317 aa8.38□□□□□ -1.07
KRT39-203ENST00000578078 KIF24Q5T7B8 1368 aa8.38□□□□□ -1.07
KRT39-203ENST00000578078 SEMA3FQ13275 785 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 ALDH1L2Q3SY69 923 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 CTR9Q6PD62 1173 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 TIGD1Q96MW7 591 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
KRT39-203ENST00000578078 NOVA2Q9UNW9 492 aaKnown RBP8.37□□□□□ -1.07
KRT39-203ENST00000578078 KIF1AQ12756 1690 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 IPO8O15397 1037 aaKnown RBP8.37□□□□□ -1.07
KRT39-203ENST00000578078 AMPHP49418 695 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 SULT6B1Q6IMI4 303 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.07
KRT39-203ENST00000578078 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 DIAPH3Q9NSV4 1193 aa8.37□□□□□ -1.07
KRT39-203ENST00000578078 MAP3K19Q56UN5 1328 aa8.36□□□□□ -1.07
KRT39-203ENST00000578078 C7P10643 843 aa8.36□□□□□ -1.07
KRT39-203ENST00000578078 SERPINB4P48594 390 aa8.36□□□□□ -1.07
KRT39-203ENST00000578078 HSP90AB2PQ58FF8 381 aa8.36□□□□□ -1.07
KRT39-203ENST00000578078 GIMAP6Q6P9H5 292 aa8.36□□□□□ -1.07
KRT39-203ENST00000578078 DZIP1LQ8IYY4 767 aaKnown RBP8.36□□□□□ -1.07
KRT39-203ENST00000578078 CERKQ8TCT0 537 aa8.36□□□□□ -1.07
KRT39-203ENST00000578078 ANKRD7Q92527 254 aa8.36□□□□□ -1.07
KRT39-203ENST00000578078 IRX5P78411 483 aaPredicted RBP8.35□□□□□ -1.07
KRT39-203ENST00000578078 MVPQ14764 893 aaKnown RBP8.35□□□□□ -1.07
KRT39-203ENST00000578078 PDCD7Q8N8D1 485 aaKnown RBP8.35□□□□□ -1.07
KRT39-203ENST00000578078 ABTB2Q8N961 1025 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 TNPO1Q92973 898 aaKnown RBP8.35□□□□□ -1.07
KRT39-203ENST00000578078 C22orf23Q9BZE7 217 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 ZBTB3Q9H5J0 574 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 SLAIN2Q9P270 581 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 RBM27Q9P2N5 1060 aaKnown RBP8.35□□□□□ -1.07
KRT39-203ENST00000578078 BOLA1Q9Y3E2 137 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 RAD50Q92878 1312 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
KRT39-203ENST00000578078 PHRF1Q9P1Y6 1649 aaKnown RBP8.34□□□□□ -1.07
KRT39-203ENST00000578078 TTLL13PA6NNM8 815 aa8.34□□□□□ -1.07
KRT39-203ENST00000578078 CACNB1Q02641 598 aaPredicted RBP8.34□□□□□ -1.07
KRT39-203ENST00000578078 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
KRT39-203ENST00000578078 ATF7IPQ6VMQ6 1270 aa8.34□□□□□ -1.07
KRT39-203ENST00000578078 FBXO33Q7Z6M2 555 aa8.34□□□□□ -1.07
KRT39-203ENST00000578078 PIBF1Q8WXW3 757 aa8.34□□□□□ -1.07
KRT39-203ENST00000578078 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
KRT39-203ENST00000578078 KDRP35968 1356 aa8.34□□□□□ -1.07
KRT39-203ENST00000578078 SEC24BO95487 1268 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 ZNF853P0CG23 659 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms