RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 CENPBP07199 599 aaPredicted RBP10.84□□□□□ -0.67
DDX42-204ENST00000577940 HOXA10P31260 410 aaPredicted RBP10.84□□□□□ -0.67
DDX42-204ENST00000577940 PDIA6Q15084 440 aa10.84□□□□□ -0.67
DDX42-204ENST00000577940 SUSD4Q5VX71 490 aa10.84□□□□□ -0.67
DDX42-204ENST00000577940 NUTM1Q86Y26 1132 aa10.84□□□□□ -0.67
DDX42-204ENST00000577940 NLRP3Q96P20 1036 aa10.84□□□□□ -0.67
DDX42-204ENST00000577940 UTP14AQ9BVJ6 771 aaKnown RBP10.84□□□□□ -0.67
DDX42-204ENST00000577940 TRIM35Q9UPQ4 493 aa10.84□□□□□ -0.67
DDX42-204ENST00000577940 NRXN2Q9P2S2 1712 aa10.83□□□□□ -0.68
DDX42-204ENST00000577940 IBTKQ9P2D0 1353 aaPredicted RBP10.83□□□□□ -0.68
DDX42-204ENST00000577940 IQCA1LA6NCM1 817 aa10.83□□□□□ -0.68
DDX42-204ENST00000577940 HOXB7P09629 217 aa10.83□□□□□ -0.68
DDX42-204ENST00000577940 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.684e-7■□□□□ 11.1
DDX42-204ENST00000577940 COPS6Q7L5N1 327 aa10.83□□□□□ -0.68
DDX42-204ENST00000577940 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
DDX42-204ENST00000577940 CRAMP1Q96RY5 1269 aa10.83□□□□□ -0.68
DDX42-204ENST00000577940 CHMP4AQ9BY43 222 aa10.83□□□□□ -0.68
DDX42-204ENST00000577940 DDX21Q9NR30 783 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDX42-204ENST00000577940 SIPA1L3O60292 1781 aaPredicted RBP10.82□□□□□ -0.68
DDX42-204ENST00000577940 RNF123Q5XPI4 1314 aa10.82□□□□□ -0.68
DDX42-204ENST00000577940 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX42-204ENST00000577940 SLC10A5Q5PT55 438 aa10.82□□□□□ -0.68
DDX42-204ENST00000577940 LRP10Q7Z4F1 713 aa10.82□□□□□ -0.68
DDX42-204ENST00000577940 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
DDX42-204ENST00000577940 DNAJC5GQ8N7S2 189 aa10.82□□□□□ -0.68
DDX42-204ENST00000577940 JDP2Q8WYK2 163 aa10.82□□□□□ -0.68
DDX42-204ENST00000577940 ZNF277Q9NRM2 450 aaPredicted RBP10.82□□□□□ -0.68
DDX42-204ENST00000577940 UBN2Q6ZU65 1347 aa10.81□□□□□ -0.68
DDX42-204ENST00000577940 NTSR2O95665 410 aa10.81□□□□□ -0.68
DDX42-204ENST00000577940 AIMP1Q12904 312 aaKnown RBP10.81□□□□□ -0.68
DDX42-204ENST00000577940 PROSER3Q2NL68 480 aa10.81□□□□□ -0.68
DDX42-204ENST00000577940 XAGE3Q8WTP9 111 aa10.81□□□□□ -0.68
DDX42-204ENST00000577940 NECTIN2Q92692 538 aa10.81□□□□□ -0.68
DDX42-204ENST00000577940 PSMD1Q99460 953 aa10.81□□□□□ -0.68
DDX42-204ENST00000577940 DBF4Q9UBU7 674 aaPredicted RBP10.81□□□□□ -0.68
DDX42-204ENST00000577940 POTECB2RU33 542 aa10.8□□□□□ -0.68
DDX42-204ENST00000577940 PITPNM1O00562 1244 aa10.8□□□□□ -0.68
DDX42-204ENST00000577940 DDNO94850 711 aaPredicted RBP10.8□□□□□ -0.68
DDX42-204ENST00000577940 ANXA1P04083 346 aa10.8□□□□□ -0.68
DDX42-204ENST00000577940 IARSP41252 1262 aaKnown RBP10.8□□□□□ -0.68
DDX42-204ENST00000577940 TCIRG1Q13488 830 aa10.8□□□□□ -0.68
DDX42-204ENST00000577940 HDGFL1Q5TGJ6 251 aa10.8□□□□□ -0.68
DDX42-204ENST00000577940 HYPKQ9NX55 129 aa10.8□□□□□ -0.68
DDX42-204ENST00000577940 SCN7AQ01118 1682 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 CEP350Q5VT06 3117 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 APAF1O14727 1248 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 BBOX1O75936 387 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 GNAI1P63096 354 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 OLFM4Q6UX06 510 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 ANKRD13DQ6ZTN6 518 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 NLRP10Q86W26 655 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 L3MBTL3Q96JM7 780 aaPredicted RBP10.79□□□□□ -0.68
DDX42-204ENST00000577940 IFT57Q9NWB7 429 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 CHPF2Q9P2E5 772 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 TRMT112Q9UI30 125 aaKnown RBP10.79□□□□□ -0.68
DDX42-204ENST00000577940 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
DDX42-204ENST00000577940 RIC1Q4ADV7 1423 aa10.78□□□□□ -0.68
DDX42-204ENST00000577940 FZD9O00144 591 aa10.78□□□□□ -0.68
DDX42-204ENST00000577940 PPEF1O14829 653 aaPredicted RBP10.78□□□□□ -0.68
DDX42-204ENST00000577940 EIF6P56537 245 aaKnown RBP10.78□□□□□ -0.68
DDX42-204ENST00000577940 DUSP27Q5VZP5 1158 aa10.78□□□□□ -0.68
DDX42-204ENST00000577940 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
DDX42-204ENST00000577940 PLBD2Q8NHP8 589 aa10.78□□□□□ -0.68
DDX42-204ENST00000577940 VPS33BQ9H267 617 aa10.78□□□□□ -0.68
DDX42-204ENST00000577940 ABCC12Q96J65 1359 aa10.78□□□□□ -0.68
DDX42-204ENST00000577940 BRCA1P38398 1863 aaKnown RBP10.78□□□□□ -0.68
DDX42-204ENST00000577940 ZNF853P0CG23 659 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 HSP90B1P14625 803 aaKnown RBP10.77□□□□□ -0.68
DDX42-204ENST00000577940 KRT24Q2M2I5 525 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 DDX46Q7L014 1031 aaKnown RBP10.77□□□□□ -0.68
DDX42-204ENST00000577940 PNMA8AQ86V59 439 aaPredicted RBP10.77□□□□□ -0.68
DDX42-204ENST00000577940 GPC2Q8N158 579 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 LARGE2Q8N3Y3 721 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 SUPT20HQ8NEM7 779 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 MBIPQ9NS73 344 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 HACL1Q9UJ83 578 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.68
DDX42-204ENST00000577940 SH3TC1Q8TE82 1336 aa10.77□□□□□ -0.69
DDX42-204ENST00000577940 AFDNP55196 1824 aaKnown RBP10.77□□□□□ -0.69
DDX42-204ENST00000577940 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
DDX42-204ENST00000577940 TMC4Q7Z404 712 aa10.76□□□□□ -0.69
DDX42-204ENST00000577940 LDHDQ86WU2 507 aa10.76□□□□□ -0.69
DDX42-204ENST00000577940 TAF1DQ9H5J8 278 aaPredicted RBP10.76□□□□□ -0.69
DDX42-204ENST00000577940 HCLS1P14317 486 aaPredicted RBP10.75□□□□□ -0.69
DDX42-204ENST00000577940 HTRA3P83110 453 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 TRIM28Q13263 835 aaKnown RBP10.75□□□□□ -0.69
DDX42-204ENST00000577940 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 SP8Q8IXZ3 490 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 NIM1KQ8IY84 436 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 JMYQ8N9B5 988 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 LMOD1P29536 600 aaPredicted RBP10.75□□□□□ -0.69
DDX42-204ENST00000577940 EPHX2P34913 555 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 EAPPQ56P03 285 aaPredicted RBP10.75□□□□□ -0.69
DDX42-204ENST00000577940 RIC3Q7Z5B4 369 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 ISCA1Q9BUE6 129 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
DDX42-204ENST00000577940 ZBED9Q6R2W3 1325 aa10.74□□□□□ -0.69
DDX42-204ENST00000577940 ZNF541Q9H0D2 1346 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms