RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 UTP14AQ9BVJ6 771 aaKnown RBP13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 CHPF2Q9P2E5 772 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 KIF3CO14782 793 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 NTSR2O95665 410 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 PDIA6Q15084 440 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 CCDC27Q2M243 656 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 PROSER3Q2NL68 480 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 COPS6Q7L5N1 327 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 RBM17Q96I25 401 aaKnown RBP13.15□□□□□ -0.3
SUPT6H-204ENST00000577939 ANXA1P04083 346 aa13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 FKBP4Q02790 459 aaKnown RBP eCLIP13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 NLRP3Q96P20 1036 aa13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
SUPT6H-204ENST00000577939 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 LRRC37AA6NMS7 1700 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 GLTPD2A6NH11 291 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 ZNF853P0CG23 659 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 HSPA6P17066 643 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 SUSD4Q5VX71 490 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 IL16Q14005 1332 aa13.13□□□□□ -0.31
SUPT6H-204ENST00000577939 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
SUPT6H-204ENST00000577939 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
SUPT6H-204ENST00000577939 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
SUPT6H-204ENST00000577939 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
SUPT6H-204ENST00000577939 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
SUPT6H-204ENST00000577939 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
SUPT6H-204ENST00000577939 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
SUPT6H-204ENST00000577939 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
SUPT6H-204ENST00000577939 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
SUPT6H-204ENST00000577939 FSTL1Q12841 308 aa13.11□□□□□ -0.31
SUPT6H-204ENST00000577939 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
SUPT6H-204ENST00000577939 PSMD1Q99460 953 aa13.11□□□□□ -0.31
SUPT6H-204ENST00000577939 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
SUPT6H-204ENST00000577939 APLP1P51693 650 aa13.1□□□□□ -0.31
SUPT6H-204ENST00000577939 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
SUPT6H-204ENST00000577939 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
SUPT6H-204ENST00000577939 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
SUPT6H-204ENST00000577939 TAF1P21675 1872 aa13.09□□□□□ -0.31
SUPT6H-204ENST00000577939 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
SUPT6H-204ENST00000577939 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
SUPT6H-204ENST00000577939 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
SUPT6H-204ENST00000577939 JDP2Q8WYK2 163 aa13.09□□□□□ -0.31
SUPT6H-204ENST00000577939 RRAGCQ9HB90 399 aa13.09□□□□□ -0.31
SUPT6H-204ENST00000577939 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
SUPT6H-204ENST00000577939 SLC10A5Q5PT55 438 aa13.08□□□□□ -0.32
SUPT6H-204ENST00000577939 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
SUPT6H-204ENST00000577939 SPEF2Q9C093 1822 aa13.08□□□□□ -0.32
SUPT6H-204ENST00000577939 ABCC4O15439 1325 aa13.08□□□□□ -0.32
SUPT6H-204ENST00000577939 SNED1Q8TER0 1413 aa13.07□□□□□ -0.32
SUPT6H-204ENST00000577939 ELL2O00472 640 aaPredicted RBP13.07□□□□□ -0.32
SUPT6H-204ENST00000577939 PRELPP51888 382 aa13.07□□□□□ -0.32
SUPT6H-204ENST00000577939 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
SUPT6H-204ENST00000577939 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
SUPT6H-204ENST00000577939 ZNF277Q9NRM2 450 aaPredicted RBP13.07□□□□□ -0.32
SUPT6H-204ENST00000577939 EIF6P56537 245 aaKnown RBP13.06□□□□□ -0.32
SUPT6H-204ENST00000577939 TRIM28Q13263 835 aaKnown RBP13.06□□□□□ -0.32
SUPT6H-204ENST00000577939 TWISTNBQ3B726 338 aaPredicted RBP13.06□□□□□ -0.32
SUPT6H-204ENST00000577939 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
SUPT6H-204ENST00000577939 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
SUPT6H-204ENST00000577939 ISCA1Q9BUE6 129 aa13.06□□□□□ -0.32
SUPT6H-204ENST00000577939 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
SUPT6H-204ENST00000577939 BBOX1O75936 387 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 GRAPQ13588 217 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 ATP6V0A2Q9Y487 856 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 FANCIQ9NVI1 1328 aa13.05□□□□□ -0.32
SUPT6H-204ENST00000577939 ATP5J2-PTCD1G3V325 749 aa13.04□□□□□ -0.32
SUPT6H-204ENST00000577939 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
SUPT6H-204ENST00000577939 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
SUPT6H-204ENST00000577939 MYD88Q99836 296 aa13.04□□□□□ -0.32
SUPT6H-204ENST00000577939 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
SUPT6H-204ENST00000577939 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
SUPT6H-204ENST00000577939 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
SUPT6H-204ENST00000577939 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
SUPT6H-204ENST00000577939 OLFM4Q6UX06 510 aa13.03□□□□□ -0.32
SUPT6H-204ENST00000577939 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
SUPT6H-204ENST00000577939 GPC2Q8N158 579 aa13.03□□□□□ -0.32
SUPT6H-204ENST00000577939 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
SUPT6H-204ENST00000577939 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms