RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 MIER1Q8N108 512 aa11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 MYD88Q99836 296 aa11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 KIAA1551Q9HCM1 1747 aa11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
CDKN2A-211ENST00000577854 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
CDKN2A-211ENST00000577854 NLRP3Q96P20 1036 aa11.84□□□□□ -0.51
CDKN2A-211ENST00000577854 SH3TC1Q8TE82 1336 aa11.84□□□□□ -0.51
CDKN2A-211ENST00000577854 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 ALDH1B1P30837 517 aa11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 RBM17Q96I25 401 aaKnown RBP11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 TMX4Q9H1E5 349 aaPredicted RBP11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
CDKN2A-211ENST00000577854 SOGA3Q5TF21 947 aa11.82□□□□□ -0.52
CDKN2A-211ENST00000577854 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
CDKN2A-211ENST00000577854 PI4KAP2A4QPH2 592 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 E9PSI1 815 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 LMNB1P20700 586 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 CCDC93Q567U6 631 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 PI4KAP1Q8N8J0 262 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 RNF123Q5XPI4 1314 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 NUP98P52948 1817 aa11.81□□□□□ -0.52
CDKN2A-211ENST00000577854 COL11A2P13942 1736 aaPredicted RBP11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 CHD4Q14839 1912 aa11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 FLIIQ13045 1269 aa11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 G2E3Q7L622 706 aa11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 ISCA1Q9BUE6 129 aa11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
CDKN2A-211ENST00000577854 KLRG2A4D1S0 409 aaPredicted RBP11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 NFKBIEO00221 500 aa11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 PPEF1O14829 653 aaPredicted RBP11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 VAMP4O75379 141 aa11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 HSP90B1P14625 803 aaKnown RBP11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 JARID2Q92833 1246 aaPredicted RBP11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
CDKN2A-211ENST00000577854 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
CDKN2A-211ENST00000577854 HNRNPUQ00839 825 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDKN2A-211ENST00000577854 CRY2Q49AN0 593 aa11.78□□□□□ -0.52
CDKN2A-211ENST00000577854 RTKN2Q8IZC4 609 aa11.78□□□□□ -0.52
CDKN2A-211ENST00000577854 ZNF521Q96K83 1311 aa11.78□□□□□ -0.52
CDKN2A-211ENST00000577854 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
CDKN2A-211ENST00000577854 DLEC1Q9Y238 1755 aa11.77□□□□□ -0.52
CDKN2A-211ENST00000577854 CWF19L2Q2TBE0 894 aaKnown RBP11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 SLC10A5Q5PT55 438 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 SLC4A10Q6U841 1118 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 ZBTB38Q8NAP3 1195 aaPredicted RBP11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 CCDC191Q8NCU4 936 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 DNAAF4Q8WXU2 420 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 ZNF277Q9NRM2 450 aaPredicted RBP11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 ABCC4O15439 1325 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 ADCY9O60503 1353 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.53
CDKN2A-211ENST00000577854 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
CDKN2A-211ENST00000577854 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDKN2A-211ENST00000577854 SLFN5Q08AF3 891 aa11.76□□□□□ -0.53
CDKN2A-211ENST00000577854 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
CDKN2A-211ENST00000577854 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
CDKN2A-211ENST00000577854 BCL2L13Q9BXK5 485 aa11.76□□□□□ -0.53
CDKN2A-211ENST00000577854 KDM2BQ8NHM5 1336 aa11.76□□□□□ -0.53
CDKN2A-211ENST00000577854 ANKRD36CQ5JPF3 1778 aa11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 ARFGEF2Q9Y6D5 1785 aa11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 F6X3S4 739 aa11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 HOXA10P31260 410 aaPredicted RBP11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 GRAPQ13588 217 aa11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 UBE3BQ7Z3V4 1068 aa11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 GRAPLQ8TC17 118 aaPredicted RBP11.75□□□□□ -0.53
CDKN2A-211ENST00000577854 CACNA1SQ13698 1873 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 IGKV5-2P06315 115 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 PRELPP51888 382 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 CCDC152Q4G0S7 254 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 C7orf43Q8WVR3 580 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 SMC4Q9NTJ3 1288 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 SLX4Q8IY92 1834 aa11.74□□□□□ -0.53
CDKN2A-211ENST00000577854 PDE8AO60658 829 aa11.73□□□□□ -0.53
CDKN2A-211ENST00000577854 BBOX1O75936 387 aa11.73□□□□□ -0.53
CDKN2A-211ENST00000577854 SLC51AQ86UW1 340 aa11.73□□□□□ -0.53
CDKN2A-211ENST00000577854 LARGE2Q8N3Y3 721 aa11.73□□□□□ -0.53
CDKN2A-211ENST00000577854 JDP2Q8WYK2 163 aa11.73□□□□□ -0.53
CDKN2A-211ENST00000577854 LTBP3Q9NS15 1303 aa11.73□□□□□ -0.53
CDKN2A-211ENST00000577854 ATP6V0A2Q9Y487 856 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms