RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
CSNK1D-206ENST00000577578 SNED1Q8TER0 1413 aa16.18■□□□□ 0.18
CSNK1D-206ENST00000577578 ALDH1B1P30837 517 aa16.17■□□□□ 0.18
CSNK1D-206ENST00000577578 SLC10A5Q5PT55 438 aa16.17■□□□□ 0.18
CSNK1D-206ENST00000577578 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
CSNK1D-206ENST00000577578 LAMB2P55268 1798 aa16.17■□□□□ 0.18
CSNK1D-206ENST00000577578 SENP3-EIF4A1A0A087X0R7 540 aa16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 TOMM70O94826 608 aa16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 CCDC93Q567U6 631 aa16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 PLBD2Q8NHP8 589 aa16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-206ENST00000577578 GLTPD2A6NH11 291 aa16.15■□□□□ 0.18
CSNK1D-206ENST00000577578 NLRP10Q86W26 655 aa16.15■□□□□ 0.18
CSNK1D-206ENST00000577578 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
CSNK1D-206ENST00000577578 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-206ENST00000577578 WDR90Q96KV7 1748 aa16.14■□□□□ 0.17
CSNK1D-206ENST00000577578 ANKRD13DQ6ZTN6 518 aa16.14■□□□□ 0.17
CSNK1D-206ENST00000577578 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
CSNK1D-206ENST00000577578 CRAMP1Q96RY5 1269 aa16.14■□□□□ 0.17
CSNK1D-206ENST00000577578 IL16Q14005 1332 aa16.14■□□□□ 0.17
CSNK1D-206ENST00000577578 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
CSNK1D-206ENST00000577578 RTKN2Q8IZC4 609 aa16.13■□□□□ 0.17
CSNK1D-206ENST00000577578 DDX60Q8IY21 1712 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-206ENST00000577578 HSPA6P17066 643 aa16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 CC2D2BQ6DHV5 1058 aa16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 RBM46Q8TBY0 533 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 RPGRQ92834 1020 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 ISCA1Q9BUE6 129 aa16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
CSNK1D-206ENST00000577578 ELL2O00472 640 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-206ENST00000577578 TRIM28Q13263 835 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-206ENST00000577578 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
CSNK1D-206ENST00000577578 SH3TC1Q8TE82 1336 aa16.11■□□□□ 0.17
CSNK1D-206ENST00000577578 CACNA1FO60840 1977 aa16.11■□□□□ 0.17
CSNK1D-206ENST00000577578 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
CSNK1D-206ENST00000577578 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
CSNK1D-206ENST00000577578 RBM17Q96I25 401 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-206ENST00000577578 PSMD1Q99460 953 aa16.1■□□□□ 0.17
CSNK1D-206ENST00000577578 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-206ENST00000577578 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
CSNK1D-206ENST00000577578 DPY19L2Q6NUT2 758 aa16.09■□□□□ 0.17
CSNK1D-206ENST00000577578 SYNE4Q8N205 404 aa16.09■□□□□ 0.17
CSNK1D-206ENST00000577578 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-206ENST00000577578 PHAXQ9H814 394 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-206ENST00000577578 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-206ENST00000577578 POTECB2RU33 542 aa16.08■□□□□ 0.16
CSNK1D-206ENST00000577578 FSTL1Q12841 308 aa16.08■□□□□ 0.16
CSNK1D-206ENST00000577578 LRRC37AA6NMS7 1700 aa16.08■□□□□ 0.16
CSNK1D-206ENST00000577578 SCN4AP35499 1836 aa16.08■□□□□ 0.16
CSNK1D-206ENST00000577578 TAF1P21675 1872 aa16.08■□□□□ 0.16
CSNK1D-206ENST00000577578 PPEF1O14829 653 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-206ENST00000577578 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-206ENST00000577578 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
CSNK1D-206ENST00000577578 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
CSNK1D-206ENST00000577578 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-206ENST00000577578 ZNF277Q9NRM2 450 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-206ENST00000577578 ABCC4O15439 1325 aa16.07■□□□□ 0.16
CSNK1D-206ENST00000577578 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
CSNK1D-206ENST00000577578 IARSP41252 1262 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-206ENST00000577578 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
CSNK1D-206ENST00000577578 COL4A5P29400 1685 aa16.05■□□□□ 0.16
CSNK1D-206ENST00000577578 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
CSNK1D-206ENST00000577578 BBOX1O75936 387 aa16.05■□□□□ 0.16
CSNK1D-206ENST00000577578 TWISTNBQ3B726 338 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-206ENST00000577578 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
CSNK1D-206ENST00000577578 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-206ENST00000577578 FZD9O00144 591 aa16.04■□□□□ 0.16
CSNK1D-206ENST00000577578 DDNO94850 711 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-206ENST00000577578 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-206ENST00000577578 SLC51AQ86UW1 340 aa16.04■□□□□ 0.16
CSNK1D-206ENST00000577578 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
CSNK1D-206ENST00000577578 DDX58O95786 925 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 APLP1P51693 650 aa16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 GRAPQ13588 217 aa16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 ZBTB38Q8NAP3 1195 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 SMC1BQ8NDV3 1235 aa16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 METTL22Q9BUU2 404 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 RTFDC1Q9BY42 306 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-206ENST00000577578 ZNF541Q9H0D2 1346 aa16.02■□□□□ 0.16
CSNK1D-206ENST00000577578 DDX46Q7L014 1031 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-206ENST00000577578 TMC4Q7Z404 712 aa16.02■□□□□ 0.16
CSNK1D-206ENST00000577578 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
CSNK1D-206ENST00000577578 VPS33BQ9H267 617 aa16.02■□□□□ 0.16
CSNK1D-206ENST00000577578 COL4A1P02462 1669 aa16.02■□□□□ 0.15
CSNK1D-206ENST00000577578 DUOX1Q9NRD9 1551 aa16.01■□□□□ 0.15
CSNK1D-206ENST00000577578 IRS4O14654 1257 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-206ENST00000577578 KSR2Q6VAB6 950 aa16.01■□□□□ 0.15
CSNK1D-206ENST00000577578 FAM9BQ8IZU0 186 aa16.01■□□□□ 0.15
CSNK1D-206ENST00000577578 MYD88Q99836 296 aa16.01■□□□□ 0.15
CSNK1D-206ENST00000577578 LTBP1Q14766 1721 aa16.01■□□□□ 0.15
CSNK1D-206ENST00000577578 ZNF521Q96K83 1311 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms