RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 CHRNA5P30532 468 aa12.54□□□□□ -0.4
NDE1-212ENST00000577101 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
NDE1-212ENST00000577101 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
NDE1-212ENST00000577101 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
NDE1-212ENST00000577101 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
NDE1-212ENST00000577101 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
NDE1-212ENST00000577101 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
NDE1-212ENST00000577101 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
NDE1-212ENST00000577101 FKBP5Q13451 457 aaPredicted RBP12.53□□□□□ -0.4
NDE1-212ENST00000577101 SLC51AQ86UW1 340 aa12.53□□□□□ -0.4
NDE1-212ENST00000577101 NBPF5PQ86XG9 351 aaPredicted RBP12.53□□□□□ -0.4
NDE1-212ENST00000577101 JARID2Q92833 1246 aaPredicted RBP12.53□□□□□ -0.4
NDE1-212ENST00000577101 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.41
NDE1-212ENST00000577101 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
NDE1-212ENST00000577101 HSP90AB3PQ58FF7 597 aa12.52□□□□□ -0.41
NDE1-212ENST00000577101 BEND3Q5T5X7 828 aa12.52□□□□□ -0.41
NDE1-212ENST00000577101 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
NDE1-212ENST00000577101 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
NDE1-212ENST00000577101 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
NDE1-212ENST00000577101 WWC3Q9ULE0 1092 aa12.52□□□□□ -0.41
NDE1-212ENST00000577101 NEURL1BA8MQ27 555 aa12.51□□□□□ -0.41
NDE1-212ENST00000577101 CASP7P55210 303 aa12.51□□□□□ -0.41
NDE1-212ENST00000577101 TGFB2P61812 414 aa12.51□□□□□ -0.41
NDE1-212ENST00000577101 PARP10Q53GL7 1025 aa12.51□□□□□ -0.41
NDE1-212ENST00000577101 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
NDE1-212ENST00000577101 CHMP4AQ9BY43 222 aa12.51□□□□□ -0.41
NDE1-212ENST00000577101 NOB1Q9ULX3 412 aaKnown RBP12.51□□□□□ -0.41
NDE1-212ENST00000577101 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
NDE1-212ENST00000577101 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
NDE1-212ENST00000577101 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
NDE1-212ENST00000577101 TPTE2Q6XPS3 522 aa12.5□□□□□ -0.41
NDE1-212ENST00000577101 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
NDE1-212ENST00000577101 UTP14AQ9BVJ6 771 aaKnown RBP12.5□□□□□ -0.41
NDE1-212ENST00000577101 SBF1O95248 1867 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 FER1L6Q2WGJ9 1857 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 PTPRCP08575 1304 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 SRGNP10124 158 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
NDE1-212ENST00000577101 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
NDE1-212ENST00000577101 PPP1R42Q7Z4L9 355 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
NDE1-212ENST00000577101 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 LRRC37AA6NMS7 1700 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 SNED1Q8TER0 1413 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 H7C1W4 665 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 ST5P78524 1137 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 GCKRQ14397 625 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 C2CD5Q86YS7 1000 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 LINS1Q8NG48 757 aa12.48□□□□□ -0.41
NDE1-212ENST00000577101 CWC25Q9NXE8 425 aaPredicted RBP12.48□□□□□ -0.41
NDE1-212ENST00000577101 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
NDE1-212ENST00000577101 ABCC4O15439 1325 aa12.47□□□□□ -0.41
NDE1-212ENST00000577101 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
NDE1-212ENST00000577101 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
NDE1-212ENST00000577101 TRIM27P14373 513 aa12.47□□□□□ -0.41
NDE1-212ENST00000577101 ZBTB38Q8NAP3 1195 aaPredicted RBP12.47□□□□□ -0.41
NDE1-212ENST00000577101 LTBP1Q14766 1721 aa12.46□□□□□ -0.41
NDE1-212ENST00000577101 RNF123Q5XPI4 1314 aa12.46□□□□□ -0.41
NDE1-212ENST00000577101 CDHR2Q9BYE9 1310 aa12.46□□□□□ -0.41
NDE1-212ENST00000577101 PDE6BP35913 854 aa12.46□□□□□ -0.41
NDE1-212ENST00000577101 SLC4A10Q6U841 1118 aa12.46□□□□□ -0.41
NDE1-212ENST00000577101 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
NDE1-212ENST00000577101 GOLGB1Q14789 3259 aaKnown RBP12.46□□□□□ -0.42
NDE1-212ENST00000577101 CHD4Q14839 1912 aa12.45□□□□□ -0.42
NDE1-212ENST00000577101 IRS4O14654 1257 aaPredicted RBP12.45□□□□□ -0.42
NDE1-212ENST00000577101 RLBP1P12271 317 aa12.45□□□□□ -0.42
NDE1-212ENST00000577101 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
NDE1-212ENST00000577101 OLFM4Q6UX06 510 aa12.45□□□□□ -0.42
NDE1-212ENST00000577101 UTYO14607 1347 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 H0YIN7 160 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 ALDH1L1O75891 902 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 NBPF7P0C2Y1 421 aaPredicted RBP12.44□□□□□ -0.42
NDE1-212ENST00000577101 HOXA10P31260 410 aaPredicted RBP12.44□□□□□ -0.42
NDE1-212ENST00000577101 PRELPP51888 382 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 NEXNQ0ZGT2 675 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 SF3B3Q15393 1217 aaKnown RBP12.44□□□□□ -0.42
NDE1-212ENST00000577101 STYK1Q6J9G0 422 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 C7orf43Q8WVR3 580 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 MASTLQ96GX5 879 aa12.44□□□□□ -0.42
NDE1-212ENST00000577101 UTRNP46939 3433 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 KIF16BQ96L93 1317 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 NPHP1O15259 732 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
NDE1-212ENST00000577101 FOXO4P98177 505 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 ATF7IPQ6VMQ6 1270 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.421e-8■□□□□ 8.5
NDE1-212ENST00000577101 SRCIN1Q9C0H9 1055 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 USP44Q9H0E7 712 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 PIM2Q9P1W9 311 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 RCAN3Q9UKA8 241 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 BCS1LQ9Y276 419 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 DUOX1Q9NRD9 1551 aa12.43□□□□□ -0.42
NDE1-212ENST00000577101 DICER1Q9UPY3 1922 aaKnown RBP12.43□□□□□ -0.42
NDE1-212ENST00000577101 GRM8O00222 908 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 PLIN1O60240 522 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms