RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	NUDC	Q9Y266	331 aa		12.98	□□□□□ -0.33
NXN-208	ENST00000575171	MEGF6	O75095	1541 aa		12.98	□□□□□ -0.33
NXN-208	ENST00000575171	COL3A1	P02461	1466 aa	Predicted RBP	12.97	□□□□□ -0.33
NXN-208	ENST00000575171	FAM208A	Q9UK61	1670 aa	Known RBP	12.97	□□□□□ -0.33
NXN-208	ENST00000575171	HMOX1	P09601	288 aa		12.97	□□□□□ -0.33
NXN-208	ENST00000575171	SSTR3	P32745	418 aa	Predicted RBP	12.97	□□□□□ -0.33
NXN-208	ENST00000575171	AEBP1	Q8IUX7	1158 aa		12.97	□□□□□ -0.33
NXN-208	ENST00000575171	PRR14	Q9BWN1	585 aa		12.97	□□□□□ -0.33
NXN-208	ENST00000575171	MAP2	P11137	1827 aa	Known RBP	12.97	□□□□□ -0.33
NXN-208	ENST00000575171	CFH	P08603	1231 aa		12.96	□□□□□ -0.33
NXN-208	ENST00000575171	CD46	P15529	392 aa		12.96	□□□□□ -0.33
NXN-208	ENST00000575171	TNS2	Q63HR2	1409 aa		12.96	□□□□□ -0.34
NXN-208	ENST00000575171	MAP3K5	Q99683	1374 aa		12.95	□□□□□ -0.34
NXN-208	ENST00000575171	ZBTB7A	O95365	584 aa		12.95	□□□□□ -0.34
NXN-208	ENST00000575171	KMT5B	Q4FZB7	885 aa		12.95	□□□□□ -0.34
NXN-208	ENST00000575171	ZCRB1	Q8TBF4	217 aa	Known RBP	12.95	□□□□□ -0.34
NXN-208	ENST00000575171	DDX54	Q8TDD1	881 aa	Known RBP	12.95	□□□□□ -0.34
NXN-208	ENST00000575171	NCAPD2	Q15021	1401 aa		12.95	□□□□□ -0.34
NXN-208	ENST00000575171	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.94	□□□□□ -0.34
NXN-208	ENST00000575171	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
NXN-208	ENST00000575171	APLP1	P51693	650 aa		12.93	□□□□□ -0.34
NXN-208	ENST00000575171	TXNRD1	Q16881	649 aa		12.93	□□□□□ -0.34
NXN-208	ENST00000575171	SYT17	Q9BSW7	474 aa		12.93	□□□□□ -0.34
NXN-208	ENST00000575171	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.93	□□□□□ -0.34
NXN-208	ENST00000575171	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.93	□□□□□ -0.34
NXN-208	ENST00000575171	SHANK3	Q9BYB0	1731 aa		12.93	□□□□□ -0.34
NXN-208	ENST00000575171	KAT6B	Q8WYB5	2073 aa		12.92	□□□□□ -0.34
NXN-208	ENST00000575171	GCGR	P47871	477 aa		12.92	□□□□□ -0.34
NXN-208	ENST00000575171	NEUROD2	Q15784	382 aa		12.92	□□□□□ -0.34
NXN-208	ENST00000575171	SLC15A2	Q16348	729 aa		12.92	□□□□□ -0.34
NXN-208	ENST00000575171	SPG7	Q9UQ90	795 aa		12.92	□□□□□ -0.34
NXN-208	ENST00000575171	PCDH11X	Q9BZA7	1347 aa		12.91	□□□□□ -0.34
NXN-208	ENST00000575171	PCDH11Y	Q9BZA8	1340 aa		12.91	□□□□□ -0.34
NXN-208	ENST00000575171	MS4A1	P11836	297 aa		12.91	□□□□□ -0.34
NXN-208	ENST00000575171	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.91	□□□□□ -0.34
NXN-208	ENST00000575171	KDM4C	Q9H3R0	1056 aa		12.91	□□□□□ -0.34
NXN-208	ENST00000575171	RGPD2	P0DJD1	1756 aa		12.91	□□□□□ -0.34
NXN-208	ENST00000575171	KDR	P35968	1356 aa		12.91	□□□□□ -0.34
NXN-208	ENST00000575171	PRKAR2B	P31323	418 aa		12.9	□□□□□ -0.34
NXN-208	ENST00000575171	WDR43	Q15061	677 aa	Known RBP eCLIP	12.9	□□□□□ -0.34
NXN-208	ENST00000575171	DIEXF	Q68CQ4	756 aa	Known RBP	12.9	□□□□□ -0.34
NXN-208	ENST00000575171	MTFR1L	Q9H019	292 aa		12.9	□□□□□ -0.34
NXN-208	ENST00000575171	LY75	O60449	1722 aa		12.9	□□□□□ -0.34
NXN-208	ENST00000575171	ACTN4	O43707	911 aa	Known RBP	12.89	□□□□□ -0.35
NXN-208	ENST00000575171	AMOT	Q4VCS5	1084 aa		12.89	□□□□□ -0.35
NXN-208	ENST00000575171	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.89	□□□□□ -0.35
NXN-208	ENST00000575171	ACSBG1	Q96GR2	724 aa		12.89	□□□□□ -0.35
NXN-208	ENST00000575171	RSPH6A	Q9H0K4	717 aa		12.89	□□□□□ -0.35
NXN-208	ENST00000575171	BRPF1	P55201	1214 aa	Predicted RBP	12.88	□□□□□ -0.35
NXN-208	ENST00000575171	CCDC184	Q52MB2	194 aa		12.88	□□□□□ -0.35
NXN-208	ENST00000575171	BEGAIN	Q9BUH8	593 aa		12.88	□□□□□ -0.35
NXN-208	ENST00000575171	MRS2	Q9HD23	443 aa		12.88	□□□□□ -0.35
NXN-208	ENST00000575171	STK32B	Q9NY57	414 aa		12.88	□□□□□ -0.35
NXN-208	ENST00000575171	CYP27B1	O15528	508 aa		12.87	□□□□□ -0.35
NXN-208	ENST00000575171	NEFM	P07197	916 aa		12.87	□□□□□ -0.35
NXN-208	ENST00000575171	PHKG2	P15735	406 aa		12.87	□□□□□ -0.35
NXN-208	ENST00000575171	C1QTNF8	P60827	252 aa		12.87	□□□□□ -0.35
NXN-208	ENST00000575171	C1orf141	Q5JVX7	400 aa		12.87	□□□□□ -0.35
NXN-208	ENST00000575171	IFNL2	Q8IZJ0	200 aa		12.87	□□□□□ -0.35
NXN-208	ENST00000575171	SYTL4	Q96C24	671 aa	Predicted RBP	12.87	□□□□□ -0.35
NXN-208	ENST00000575171	PLEKHG2	Q9H7P9	1386 aa		12.86	□□□□□ -0.35
NXN-208	ENST00000575171	MTHFSD	Q2M296	383 aa	Known RBP	12.86	□□□□□ -0.35
NXN-208	ENST00000575171	DOT1L	Q8TEK3	1739 aa		12.85	□□□□□ -0.35
NXN-208	ENST00000575171	KDM4A	O75164	1064 aa		12.85	□□□□□ -0.35
NXN-208	ENST00000575171	ZNF827	Q17R98	1081 aa		12.85	□□□□□ -0.35
NXN-208	ENST00000575171	NUTM1	Q86Y26	1132 aa		12.85	□□□□□ -0.35
NXN-208	ENST00000575171	PCDHB3	Q9Y5E6	796 aa		12.85	□□□□□ -0.35
NXN-208	ENST00000575171	MAPK8IP3	Q9UPT6	1336 aa		12.85	□□□□□ -0.35
NXN-208	ENST00000575171	SENP3-EIF4A1	A0A087X0R7	540 aa		12.84	□□□□□ -0.35
NXN-208	ENST00000575171	HSP90AB1	P08238	724 aa	Known RBP	12.84	□□□□□ -0.35
NXN-208	ENST00000575171	FUT2	Q10981	343 aa		12.84	□□□□□ -0.35
NXN-208	ENST00000575171	CCDC146	Q8IYE0	955 aa		12.84	□□□□□ -0.35
NXN-208	ENST00000575171	GAS2L2	Q8NHY3	880 aa		12.84	□□□□□ -0.35
NXN-208	ENST00000575171	PHACTR3	Q96KR7	559 aa		12.84	□□□□□ -0.35
NXN-208	ENST00000575171	ARX	Q96QS3	562 aa		12.84	□□□□□ -0.35
NXN-208	ENST00000575171	PNN	Q9H307	717 aa	Known RBP	12.84	□□□□□ -0.35
NXN-208	ENST00000575171	GRIPAP1	Q4V328	841 aa		12.83	□□□□□ -0.36
NXN-208	ENST00000575171	AKAP4	Q5JQC9	854 aa		12.83	□□□□□ -0.36
NXN-208	ENST00000575171	MPRIP	Q6WCQ1	1025 aa		12.83	□□□□□ -0.36
NXN-208	ENST00000575171	LRRC4B	Q9NT99	713 aa		12.83	□□□□□ -0.36
NXN-208	ENST00000575171	ADAMTS8	Q9UP79	889 aa		12.83	□□□□□ -0.36
NXN-208	ENST00000575171	PKD1L3	Q7Z443	1732 aa		12.82	□□□□□ -0.36
NXN-208	ENST00000575171	ATP6V1A	P38606	617 aa		12.82	□□□□□ -0.36
NXN-208	ENST00000575171	USP46	P62068	366 aa		12.82	□□□□□ -0.36
NXN-208	ENST00000575171	DDRGK1	Q96HY6	314 aa		12.81	□□□□□ -0.36
NXN-208	ENST00000575171	DCAF5	Q96JK2	942 aa		12.81	□□□□□ -0.36
NXN-208	ENST00000575171	PLEKHF1	Q96S99	279 aa		12.81	□□□□□ -0.36
NXN-208	ENST00000575171	TAF1L	Q8IZX4	1826 aa		12.81	□□□□□ -0.36
NXN-208	ENST00000575171	GNAT3	A8MTJ3	354 aa		12.8	□□□□□ -0.36
NXN-208	ENST00000575171	CABP4	P57796	275 aa		12.8	□□□□□ -0.36
NXN-208	ENST00000575171	DIXDC1	Q155Q3	683 aa		12.8	□□□□□ -0.36
NXN-208	ENST00000575171	SPIRE2	Q8WWL2	714 aa		12.8	□□□□□ -0.36
NXN-208	ENST00000575171	MTR	Q99707	1265 aa		12.8	□□□□□ -0.36
NXN-208	ENST00000575171	TMOD3	Q9NYL9	352 aa		12.8	□□□□□ -0.36
NXN-208	ENST00000575171	KDM6A	O15550	1401 aa	Predicted RBP	12.79	□□□□□ -0.36
NXN-208	ENST00000575171	RNMT	O43148	476 aa	Known RBP	12.79	□□□□□ -0.36
NXN-208	ENST00000575171	COPS2	P61201	443 aa		12.79	□□□□□ -0.36
NXN-208	ENST00000575171	PUS10	Q3MIT2	529 aa	Known RBP	12.79	□□□□□ -0.36
NXN-208	ENST00000575171	BLOC1S3	Q6QNY0	202 aa		12.79	□□□□□ -0.36
NXN-208	ENST00000575171	FAM9B	Q8IZU0	186 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms