RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PPP1R42Q7Z4L9 355 aa27.61■■■□□ 2.01
CHRNB1-206ENST00000574054 XAGE3Q8WTP9 111 aa27.6■■■□□ 2.01
CHRNB1-206ENST00000574054 RIC1Q4ADV7 1423 aa27.59■■■□□ 2.01
CHRNB1-206ENST00000574054 COPS6Q7L5N1 327 aa27.59■■■□□ 2.01
CHRNB1-206ENST00000574054 SYNE4Q8N205 404 aa27.58■■■□□ 2.01
CHRNB1-206ENST00000574054 UTP14AQ9BVJ6 771 aaKnown RBP27.58■■■□□ 2.01
CHRNB1-206ENST00000574054 HOXA10P31260 410 aaPredicted RBP27.57■■■□□ 2
CHRNB1-206ENST00000574054 KLRG1Q96E93 195 aa27.57■■■□□ 2
CHRNB1-206ENST00000574054 RBM17Q96I25 401 aaKnown RBP27.57■■■□□ 2
CHRNB1-206ENST00000574054 IARSP41252 1262 aaKnown RBP27.56■■■□□ 2
CHRNB1-206ENST00000574054 C3orf67Q6ZVT6 689 aa27.56■■■□□ 2
CHRNB1-206ENST00000574054 DDX21Q9NR30 783 aaKnown RBP eCLIP27.56■■■□□ 2
CHRNB1-206ENST00000574054 TCERG1O14776 1098 aaKnown RBP27.55■■■□□ 2
CHRNB1-206ENST00000574054 ZNF541Q9H0D2 1346 aa27.55■■■□□ 2
CHRNB1-206ENST00000574054 HSP90AB3PQ58FF7 597 aa27.54■■■□□ 2
CHRNB1-206ENST00000574054 HDGFL1Q5TGJ6 251 aa27.54■■■□□ 2
CHRNB1-206ENST00000574054 CC2D2BQ6DHV5 1058 aa27.54■■■□□ 2
CHRNB1-206ENST00000574054 NLRP3Q96P20 1036 aa27.54■■■□□ 2
CHRNB1-206ENST00000574054 CHPF2Q9P2E5 772 aa27.54■■■□□ 2
CHRNB1-206ENST00000574054 IQCA1LA6NCM1 817 aa27.53■■■□□ 2
CHRNB1-206ENST00000574054 PPEF1O14829 653 aaPredicted RBP27.53■■■□□ 2
CHRNB1-206ENST00000574054 CRAMP1Q96RY5 1269 aa27.53■■■□□ 2
CHRNB1-206ENST00000574054 PSMD1Q99460 953 aa27.53■■■□□ 2
CHRNB1-206ENST00000574054 CHADLQ6NUI6 762 aa27.52■■■□□ 2
CHRNB1-206ENST00000574054 L3MBTL3Q96JM7 780 aaPredicted RBP27.52■■■□□ 2
CHRNB1-206ENST00000574054 POTEIP0CG38 1075 aa27.51■■□□□ 1.99
CHRNB1-206ENST00000574054 POTEJP0CG39 1038 aa27.51■■□□□ 1.99
CHRNB1-206ENST00000574054 NLRP10Q86W26 655 aa27.51■■□□□ 1.99
CHRNB1-206ENST00000574054 CFAP44Q96MT7 982 aa27.51■■□□□ 1.99
CHRNB1-206ENST00000574054 SNED1Q8TER0 1413 aa27.5■■□□□ 1.99
CHRNB1-206ENST00000574054 HOXB7P09629 217 aa27.5■■□□□ 1.99
CHRNB1-206ENST00000574054 TCIRG1Q13488 830 aa27.5■■□□□ 1.99
CHRNB1-206ENST00000574054 SLC51AQ86UW1 340 aa27.5■■□□□ 1.99
CHRNB1-206ENST00000574054 JDP2Q8WYK2 163 aa27.5■■□□□ 1.99
CHRNB1-206ENST00000574054 RNF123Q5XPI4 1314 aa27.49■■□□□ 1.99
CHRNB1-206ENST00000574054 APAF1O14727 1248 aa27.49■■□□□ 1.99
CHRNB1-206ENST00000574054 SLC10A5Q5PT55 438 aa27.49■■□□□ 1.99
CHRNB1-206ENST00000574054 TAF1DQ9H5J8 278 aaPredicted RBP27.49■■□□□ 1.99
CHRNB1-206ENST00000574054 MBIPQ9NS73 344 aa27.49■■□□□ 1.99
CHRNB1-206ENST00000574054 TRMT112Q9UI30 125 aaKnown RBP27.49■■□□□ 1.99
CHRNB1-206ENST00000574054 FZD9O00144 591 aa27.48■■□□□ 1.99
CHRNB1-206ENST00000574054 HCLS1P14317 486 aaPredicted RBP27.48■■□□□ 1.99
CHRNB1-206ENST00000574054 GRIPAP1Q4V328 841 aa27.48■■□□□ 1.99
CHRNB1-206ENST00000574054 DUSP27Q5VZP5 1158 aa27.48■■□□□ 1.99
CHRNB1-206ENST00000574054 ZNF428Q96B54 188 aa27.48■■□□□ 1.99
CHRNB1-206ENST00000574054 TMX4Q9H1E5 349 aaPredicted RBP27.48■■□□□ 1.99
CHRNB1-206ENST00000574054 DBF4Q9UBU7 674 aaPredicted RBP27.47■■□□□ 1.99
CHRNB1-206ENST00000574054 PCNTO95613 3336 aa27.46■■□□□ 1.99
CHRNB1-206ENST00000574054 ABCC4O15439 1325 aa27.46■■□□□ 1.99
CHRNB1-206ENST00000574054 ANKRD36CQ5JPF3 1778 aa27.46■■□□□ 1.99
CHRNB1-206ENST00000574054 EAPPQ56P03 285 aaPredicted RBP27.46■■□□□ 1.99
CHRNB1-206ENST00000574054 LARGE2Q8N3Y3 721 aa27.46■■□□□ 1.99
CHRNB1-206ENST00000574054 HACL1Q9UJ83 578 aa27.46■■□□□ 1.99
CHRNB1-206ENST00000574054 SH3TC1Q8TE82 1336 aa27.45■■□□□ 1.99
CHRNB1-206ENST00000574054 LDHDQ86WU2 507 aa27.45■■□□□ 1.98
CHRNB1-206ENST00000574054 JMYQ8N9B5 988 aa27.45■■□□□ 1.98
CHRNB1-206ENST00000574054 PLBD2Q8NHP8 589 aa27.45■■□□□ 1.98
CHRNB1-206ENST00000574054 SCN4AP35499 1836 aa27.44■■□□□ 1.98
CHRNB1-206ENST00000574054 EIF6P56537 245 aaKnown RBP27.44■■□□□ 1.98
CHRNB1-206ENST00000574054 CALD1Q05682 793 aaKnown RBP27.44■■□□□ 1.98
CHRNB1-206ENST00000574054 IFFO2Q5TF58 517 aa27.44■■□□□ 1.98
CHRNB1-206ENST00000574054 ANKRD13DQ6ZTN6 518 aa27.44■■□□□ 1.98
CHRNB1-206ENST00000574054 GJA3Q9Y6H8 435 aa27.44■■□□□ 1.98
CHRNB1-206ENST00000574054 GPC2Q8N158 579 aa27.43■■□□□ 1.98
CHRNB1-206ENST00000574054 IFT57Q9NWB7 429 aa27.43■■□□□ 1.98
CHRNB1-206ENST00000574054 HYPKQ9NX55 129 aa27.43■■□□□ 1.98
CHRNB1-206ENST00000574054 ATP6V0A2Q9Y487 856 aa27.43■■□□□ 1.98
CHRNB1-206ENST00000574054 ZNF853P0CG23 659 aa27.42■■□□□ 1.98
CHRNB1-206ENST00000574054 EPHX2P34913 555 aa27.42■■□□□ 1.98
CHRNB1-206ENST00000574054 GNAI1P63096 354 aa27.42■■□□□ 1.98
CHRNB1-206ENST00000574054 CLEC11AQ9Y240 323 aa27.42■■□□□ 1.98
CHRNB1-206ENST00000574054 COL4A5P29400 1685 aa27.42■■□□□ 1.98
CHRNB1-206ENST00000574054 DDX46Q7L014 1031 aaKnown RBP27.41■■□□□ 1.98
CHRNB1-206ENST00000574054 NIM1KQ8IY84 436 aa27.41■■□□□ 1.98
CHRNB1-206ENST00000574054 ATP5J2-PTCD1G3V325 749 aa27.4■■□□□ 1.98
CHRNB1-206ENST00000574054 PPIP5K2O43314 1243 aa27.4■■□□□ 1.98
CHRNB1-206ENST00000574054 ELL2O00472 640 aaPredicted RBP27.39■■□□□ 1.98
CHRNB1-206ENST00000574054 BBOX1O75936 387 aa27.39■■□□□ 1.98
CHRNB1-206ENST00000574054 AOC3Q16853 763 aa27.38■■□□□ 1.97
CHRNB1-206ENST00000574054 DPP8Q6V1X1 898 aaPredicted RBP27.38■■□□□ 1.97
CHRNB1-206ENST00000574054 CREBZFQ9NS37 354 aa27.38■■□□□ 1.97
CHRNB1-206ENST00000574054 LAMB2P55268 1798 aa27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 LMOD1P29536 600 aaPredicted RBP27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 GRAPQ13588 217 aa27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 PNMA8AQ86V59 439 aaPredicted RBP27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 SUPT20HQ8NEM7 779 aa27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 GRAPLQ8TC17 118 aaPredicted RBP27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 FAM89AQ96GI7 184 aa27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 ISCA1Q9BUE6 129 aa27.37■■□□□ 1.97
CHRNB1-206ENST00000574054 GOLGA2Q08379 1002 aa27.36■■□□□ 1.97
CHRNB1-206ENST00000574054 SP8Q8IXZ3 490 aa27.36■■□□□ 1.97
CHRNB1-206ENST00000574054 RTL5Q5HYW3 569 aaPredicted RBP27.35■■□□□ 1.97
CHRNB1-206ENST00000574054 RIC3Q7Z5B4 369 aa27.35■■□□□ 1.97
CHRNB1-206ENST00000574054 MPNDQ8N594 471 aa27.35■■□□□ 1.97
CHRNB1-206ENST00000574054 CCDC184Q52MB2 194 aa27.34■■□□□ 1.97
CHRNB1-206ENST00000574054 MKRN1Q9UHC7 482 aaKnown RBP27.34■■□□□ 1.97
CHRNB1-206ENST00000574054 PASKQ96RG2 1323 aa27.34■■□□□ 1.97
CHRNB1-206ENST00000574054 C8orf58Q8NAV2 365 aa27.33■■□□□ 1.97
CHRNB1-206ENST00000574054 RTFDC1Q9BY42 306 aaPredicted RBP27.33■■□□□ 1.97
CHRNB1-206ENST00000574054 VPS33BQ9H267 617 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms