RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PTPRCP08575 1304 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 NTSR2O95665 410 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 C2CD5Q86YS7 1000 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 MRPL50Q8N5N7 158 aaKnown RBP16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 DNAAF4Q8WXU2 420 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 DLEC1Q9Y238 1755 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 ADCY9O60503 1353 aa16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
TRAPPC1-206ENST00000573989 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
TRAPPC1-206ENST00000573989 ERFEQ4G0M1 354 aa16.24■□□□□ 0.19
TRAPPC1-206ENST00000573989 CCDC24Q8N4L8 307 aa16.24■□□□□ 0.19
TRAPPC1-206ENST00000573989 CWC25Q9NXE8 425 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC1-206ENST00000573989 RIC1Q4ADV7 1423 aa16.23■□□□□ 0.19
TRAPPC1-206ENST00000573989 CHRNA5P30532 468 aa16.23■□□□□ 0.19
TRAPPC1-206ENST00000573989 NLRP3Q96P20 1036 aa16.23■□□□□ 0.19
TRAPPC1-206ENST00000573989 GRIN3BO60391 1043 aa16.22■□□□□ 0.19
TRAPPC1-206ENST00000573989 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
TRAPPC1-206ENST00000573989 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC1-206ENST00000573989 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
TRAPPC1-206ENST00000573989 ZNF622Q969S3 477 aaKnown RBP eCLIP16.22■□□□□ 0.19
TRAPPC1-206ENST00000573989 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
TRAPPC1-206ENST00000573989 BCL2L13Q9BXK5 485 aa16.22■□□□□ 0.19
TRAPPC1-206ENST00000573989 KIF16BQ96L93 1317 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 NPR1P16066 1061 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 SLC10A5Q5PT55 438 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 TTLL6Q8N841 843 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 ZBTB38Q8NAP3 1195 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 LINS1Q8NG48 757 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 ARFGEF1Q9Y6D6 1849 aa16.21■□□□□ 0.19
TRAPPC1-206ENST00000573989 COL11A2P13942 1736 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 KLRG2A4D1S0 409 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 NEURL1BA8MQ27 555 aa16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 PCCAP05165 728 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 SRGNP10124 158 aa16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 KCNA3P22001 575 aa16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 FAM89AQ96GI7 184 aa16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 ABCC12Q96J65 1359 aa16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
TRAPPC1-206ENST00000573989 F6X3S4 739 aa16.19■□□□□ 0.18
TRAPPC1-206ENST00000573989 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
TRAPPC1-206ENST00000573989 IGKV5-2P06315 115 aa16.19■□□□□ 0.18
TRAPPC1-206ENST00000573989 SLC4A10Q6U841 1118 aa16.19■□□□□ 0.18
TRAPPC1-206ENST00000573989 WWC3Q9ULE0 1092 aa16.19■□□□□ 0.18
TRAPPC1-206ENST00000573989 LAMB2P55268 1798 aa16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 CWF19L2Q2TBE0 894 aaKnown RBP16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
TRAPPC1-206ENST00000573989 DDX60Q8IY21 1712 aaKnown RBP16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 YBX3P16989 372 aaKnown RBP eCLIP16.17■□□□□ 0.181e-9■■■□□ 17
TRAPPC1-206ENST00000573989 GCKRQ14397 625 aa16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 BEND3Q5T5X7 828 aa16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 MYH3P11055 1940 aa16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 CHD4Q14839 1912 aa16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
TRAPPC1-206ENST00000573989 PDE8AO60658 829 aa16.15■□□□□ 0.18
TRAPPC1-206ENST00000573989 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
TRAPPC1-206ENST00000573989 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
TRAPPC1-206ENST00000573989 SYNE4Q8N205 404 aa16.15■□□□□ 0.18
TRAPPC1-206ENST00000573989 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC1-206ENST00000573989 H7C1W4 665 aa16.14■□□□□ 0.17
TRAPPC1-206ENST00000573989 HOXA10P31260 410 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC1-206ENST00000573989 UBE3BQ7Z3V4 1068 aa16.14■□□□□ 0.17
TRAPPC1-206ENST00000573989 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC1-206ENST00000573989 CRAMP1Q96RY5 1269 aa16.14■□□□□ 0.17
TRAPPC1-206ENST00000573989 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC1-206ENST00000573989 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
TRAPPC1-206ENST00000573989 BCAR3O75815 825 aa16.13■□□□□ 0.17
TRAPPC1-206ENST00000573989 CCT4P50991 539 aaKnown RBP16.13■□□□□ 0.17
TRAPPC1-206ENST00000573989 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
TRAPPC1-206ENST00000573989 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
TRAPPC1-206ENST00000573989 PRPF40BQ6NWY9 871 aaKnown RBP16.13■□□□□ 0.17
TRAPPC1-206ENST00000573989 GOLGB1Q14789 3259 aaKnown RBP16.13■□□□□ 0.17
TRAPPC1-206ENST00000573989 GRM8O00222 908 aa16.12■□□□□ 0.17
TRAPPC1-206ENST00000573989 ZKSCAN2Q63HK3 967 aa16.12■□□□□ 0.17
TRAPPC1-206ENST00000573989 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
TRAPPC1-206ENST00000573989 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
TRAPPC1-206ENST00000573989 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
TRAPPC1-206ENST00000573989 JARID2Q92833 1246 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC1-206ENST00000573989 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
TRAPPC1-206ENST00000573989 C21orf2O43822 256 aa16.1■□□□□ 0.17
TRAPPC1-206ENST00000573989 BBOX1O75936 387 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms