RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 C16orf45Q96MC5 204 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 CNNM3Q8NE01 707 aa18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 SF3A3Q12874 501 aaKnown RBP eCLIP18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 RRS1Q15050 365 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 CCDC155Q8N6L0 562 aa18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 GBP3Q9H0R5 595 aa18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 PLCB3Q01970 1234 aa18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 SPOUT1Q5T280 376 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 CABP5Q9NP86 173 aa18.15■□□□□ 0.5
CACNA1A-202ENST00000573710 SRCIN1Q9C0H9 1055 aa18.14■□□□□ 0.5
CACNA1A-202ENST00000573710 HSPA4P34932 840 aa18.14■□□□□ 0.49
CACNA1A-202ENST00000573710 TBC1D5Q92609 795 aa18.14■□□□□ 0.49
CACNA1A-202ENST00000573710 MYD88Q99836 296 aa18.14■□□□□ 0.49
CACNA1A-202ENST00000573710 TACC3Q9Y6A5 838 aa18.14■□□□□ 0.49
CACNA1A-202ENST00000573710 PPP1R21Q6ZMI0 780 aa18.14■□□□□ 0.49
CACNA1A-202ENST00000573710 WDR63Q8IWG1 891 aa18.14■□□□□ 0.49
CACNA1A-202ENST00000573710 DDX27Q96GQ7 796 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-202ENST00000573710 IFIT3O14879 490 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 IFIT1P09914 478 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 MAP3K11Q16584 847 aa18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 KCNA4P22459 653 aa18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 ZNF710Q8N1W2 664 aa18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 NCBP1Q09161 790 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 PTGS1P23219 599 aa18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 SFPQP23246 707 aaKnown RBP eCLIP18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 CATIPQ7Z7H3 387 aa18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 PICALMQ13492 652 aa18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 NAA15Q9BXJ9 866 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 AFG3L2Q9Y4W6 797 aa18.13■□□□□ 0.49
CACNA1A-202ENST00000573710 A0A087WZG4 1122 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 KMT5BQ4FZB7 885 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 C8orf76Q96K31 380 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 SPATA17Q96L03 361 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 BICDL2A1A5D9 508 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 KCNK9Q9NPC2 374 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 SWAP70Q9UH65 585 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 VIMP08670 466 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 TTC21AQ8NDW8 1320 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 RIOK3O14730 519 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 CALM1P0DP23 149 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 CALM2P0DP24 149 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 CALM3P0DP25 149 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 ACRBPQ8NEB7 543 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 WDR66Q8TBY9 1149 aa18.12■□□□□ 0.49
CACNA1A-202ENST00000573710 FAM170AA1A519 330 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 MCM3P25205 808 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 WIZO95785 1651 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 BAG1Q99933 345 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 VEZTQ9HBM0 779 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 RNF34Q969K3 372 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 GRPEL1Q9HAV7 217 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 TSPY2A6NKD2 308 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 YEATS4O95619 227 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 HSPA1LP34931 641 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 ATRIPQ8WXE1 791 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 PRAM1Q96QH2 718 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 KIF18AQ8NI77 898 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 SEC62Q99442 399 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 ZNF213O14771 459 aa18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-202ENST00000573710 MORC4Q8TE76 937 aa18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 CCDC18Q5T9S5 1454 aa18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 FAM169AQ9Y6X4 670 aa18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 CCT4P50991 539 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 FOXD4Q12950 439 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
CACNA1A-202ENST00000573710 VPS52Q8N1B4 723 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 TBCAO75347 108 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 TCP11L1Q9NUJ3 509 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 SMARCA5O60264 1052 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 CCDC114Q96M63 670 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 MAP3K12Q12852 859 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 NACA2Q9H009 215 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 SLC5A1P13866 664 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 MAK16Q9BXY0 300 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 TTLL3Q9Y4R7 772 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 ZSCAN12O43309 604 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 RFC4P35249 363 aa18.09■□□□□ 0.49
CACNA1A-202ENST00000573710 STXBP4Q6ZWJ1 553 aa18.08■□□□□ 0.49
CACNA1A-202ENST00000573710 TRIM6Q9C030 488 aaPredicted RBP18.08■□□□□ 0.49
CACNA1A-202ENST00000573710 TMC6Q7Z403 805 aa18.08■□□□□ 0.49
CACNA1A-202ENST00000573710 TTC30BQ8N4P2 665 aa18.08■□□□□ 0.49
CACNA1A-202ENST00000573710 KAT14Q9H8E8 782 aa18.08■□□□□ 0.49
CACNA1A-202ENST00000573710 CACYBPQ9HB71 228 aaKnown RBP18.08■□□□□ 0.49
CACNA1A-202ENST00000573710 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
CACNA1A-202ENST00000573710 TRIM7Q9C029 511 aa18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 CLIP2Q9UDT6 1046 aa18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 NOD1Q9Y239 953 aa18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 GINS2Q9Y248 185 aa18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 HARSP12081 509 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 ATP6V1E1P36543 226 aa18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 CKAP4Q07065 602 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 RSPH14Q9UHP6 348 aa18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 FMNL3Q8IVF7 1028 aa18.08■□□□□ 0.48
CACNA1A-202ENST00000573710 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms