RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 TNNQ9UQP3 1299 aa28.06■■■□□ 2.08
RAB40B-207ENST00000572603 BRCA1P38398 1863 aaKnown RBP28.06■■■□□ 2.08
RAB40B-207ENST00000572603 ABCC4O15439 1325 aa28.05■■■□□ 2.08
RAB40B-207ENST00000572603 NEXNQ0ZGT2 675 aa28.05■■■□□ 2.08
RAB40B-207ENST00000572603 CCDC191Q8NCU4 936 aa28.05■■■□□ 2.08
RAB40B-207ENST00000572603 LINS1Q8NG48 757 aa28.05■■■□□ 2.08
RAB40B-207ENST00000572603 API5Q9BZZ5 524 aaKnown RBP28.05■■■□□ 2.08
RAB40B-207ENST00000572603 RNF123Q5XPI4 1314 aa28.04■■■□□ 2.08
RAB40B-207ENST00000572603 TRIM27P14373 513 aa28.04■■■□□ 2.08
RAB40B-207ENST00000572603 PPP1R42Q7Z4L9 355 aa28.04■■■□□ 2.08
RAB40B-207ENST00000572603 NUTM1Q86Y26 1132 aa28.04■■■□□ 2.08
RAB40B-207ENST00000572603 CCDC24Q8N4L8 307 aa28.04■■■□□ 2.08
RAB40B-207ENST00000572603 NYXQ9GZU5 481 aa28.04■■■□□ 2.08
RAB40B-207ENST00000572603 FRAT1Q92837 279 aaPredicted RBP28.03■■■□□ 2.08
RAB40B-207ENST00000572603 UTP14AQ9BVJ6 771 aaKnown RBP28.03■■■□□ 2.08
RAB40B-207ENST00000572603 CWC25Q9NXE8 425 aaPredicted RBP28.03■■■□□ 2.08
RAB40B-207ENST00000572603 PPP1R1BQ9UD71 204 aaPredicted RBP28.03■■■□□ 2.08
RAB40B-207ENST00000572603 ERFEQ4G0M1 354 aa28.02■■■□□ 2.08
RAB40B-207ENST00000572603 SLC4A10Q6U841 1118 aa28.02■■■□□ 2.08
RAB40B-207ENST00000572603 ATF7IPQ6VMQ6 1270 aa28.02■■■□□ 2.08
RAB40B-207ENST00000572603 TPTE2Q6XPS3 522 aa28.02■■■□□ 2.08
RAB40B-207ENST00000572603 FHDC1Q9C0D6 1143 aaPredicted RBP28.02■■■□□ 2.08
RAB40B-207ENST00000572603 MYH3P11055 1940 aa28.02■■■□□ 2.08
RAB40B-207ENST00000572603 ZKSCAN2Q63HK3 967 aa28.01■■■□□ 2.07
RAB40B-207ENST00000572603 CD2APQ9Y5K6 639 aa28.01■■■□□ 2.07
RAB40B-207ENST00000572603 IPO8O15397 1037 aaKnown RBP28■■■□□ 2.07
RAB40B-207ENST00000572603 ST5P78524 1137 aa28■■■□□ 2.07
RAB40B-207ENST00000572603 GCKRQ14397 625 aa28■■■□□ 2.07
RAB40B-207ENST00000572603 SYNE4Q8N205 404 aa28■■■□□ 2.07
RAB40B-207ENST00000572603 TRMT112Q9UI30 125 aaKnown RBP28■■■□□ 2.07
RAB40B-207ENST00000572603 SH3TC1Q8TE82 1336 aa27.99■■■□□ 2.07
RAB40B-207ENST00000572603 ALDH1L1O75891 902 aa27.99■■■□□ 2.07
RAB40B-207ENST00000572603 PCCAP05165 728 aaPredicted RBP27.98■■■□□ 2.07
RAB40B-207ENST00000572603 ZBTB38Q8NAP3 1195 aaPredicted RBP27.98■■■□□ 2.07
RAB40B-207ENST00000572603 SRCIN1Q9C0H9 1055 aa27.98■■■□□ 2.07
RAB40B-207ENST00000572603 KLHL34Q8N239 644 aa27.97■■■□□ 2.07
RAB40B-207ENST00000572603 NLGN2Q8NFZ4 835 aa27.97■■■□□ 2.07
RAB40B-207ENST00000572603 FAM89AQ96GI7 184 aa27.97■■■□□ 2.07
RAB40B-207ENST00000572603 BRIP1Q9BX63 1249 aa27.97■■■□□ 2.07
RAB40B-207ENST00000572603 NPHP1O15259 732 aa27.96■■■□□ 2.07
RAB40B-207ENST00000572603 CASP7P55210 303 aa27.96■■■□□ 2.07
RAB40B-207ENST00000572603 SLC10A5Q5PT55 438 aa27.96■■■□□ 2.07
RAB40B-207ENST00000572603 CACNA1SQ13698 1873 aa27.95■■■□□ 2.07
RAB40B-207ENST00000572603 CDHR2Q9BYE9 1310 aa27.95■■■□□ 2.07
RAB40B-207ENST00000572603 H7C1W4 665 aa27.95■■■□□ 2.06
RAB40B-207ENST00000572603 JARID2Q92833 1246 aaPredicted RBP27.95■■■□□ 2.06
RAB40B-207ENST00000572603 SYT17Q9BSW7 474 aa27.95■■■□□ 2.06
RAB40B-207ENST00000572603 KLRG2A4D1S0 409 aaPredicted RBP27.94■■■□□ 2.06
RAB40B-207ENST00000572603 RLBP1P12271 317 aa27.94■■■□□ 2.06
RAB40B-207ENST00000572603 GTF2E1P29083 439 aaPredicted RBP27.94■■■□□ 2.06
RAB40B-207ENST00000572603 CCT4P50991 539 aaKnown RBP27.94■■■□□ 2.06
RAB40B-207ENST00000572603 RTL5Q5HYW3 569 aaPredicted RBP27.94■■■□□ 2.06
RAB40B-207ENST00000572603 INTS3Q68E01 1043 aaKnown RBP27.94■■■□□ 2.06
RAB40B-207ENST00000572603 C3orf67Q6ZVT6 689 aa27.94■■■□□ 2.06
RAB40B-207ENST00000572603 CLUAP1Q96AJ1 413 aa27.94■■■□□ 2.06
RAB40B-207ENST00000572603 PLIN1O60240 522 aa27.92■■■□□ 2.06
RAB40B-207ENST00000572603 HCLS1P14317 486 aaPredicted RBP27.92■■■□□ 2.06
RAB40B-207ENST00000572603 TGFB2P61812 414 aa27.92■■■□□ 2.06
RAB40B-207ENST00000572603 UBE3BQ7Z3V4 1068 aa27.92■■■□□ 2.06
RAB40B-207ENST00000572603 UTYO14607 1347 aa27.92■■■□□ 2.06
RAB40B-207ENST00000572603 GRM8O00222 908 aa27.91■■■□□ 2.06
RAB40B-207ENST00000572603 IRS4O14654 1257 aaPredicted RBP27.91■■■□□ 2.06
RAB40B-207ENST00000572603 CHRNA5P30532 468 aa27.91■■■□□ 2.06
RAB40B-207ENST00000572603 DPEP1P16444 411 aa27.9■■■□□ 2.06
RAB40B-207ENST00000572603 PDE6BP35913 854 aa27.9■■■□□ 2.06
RAB40B-207ENST00000572603 CRY2Q49AN0 593 aa27.9■■■□□ 2.06
RAB40B-207ENST00000572603 DZIP1LQ8IYY4 767 aaKnown RBP27.9■■■□□ 2.06
RAB40B-207ENST00000572603 TMEM57Q8N5G2 664 aa27.9■■■□□ 2.06
RAB40B-207ENST00000572603 COL4A1P02462 1669 aa27.9■■■□□ 2.06
RAB40B-207ENST00000572603 TAF1P21675 1872 aa27.89■■■□□ 2.06
RAB40B-207ENST00000572603 KCNA3P22001 575 aa27.89■■■□□ 2.06
RAB40B-207ENST00000572603 C2CD5Q86YS7 1000 aa27.89■■■□□ 2.06
RAB40B-207ENST00000572603 ARFGEF1Q9Y6D6 1849 aa27.88■■■□□ 2.05
RAB40B-207ENST00000572603 A0A0G2JLW4 131 aa27.88■■■□□ 2.05
RAB40B-207ENST00000572603 USP44Q9H0E7 712 aa27.88■■■□□ 2.05
RAB40B-207ENST00000572603 NBPF7P0C2Y1 421 aaPredicted RBP27.87■■■□□ 2.05
RAB40B-207ENST00000572603 SRGNP10124 158 aa27.87■■■□□ 2.05
RAB40B-207ENST00000572603 RRP1P56182 461 aaKnown RBP27.87■■■□□ 2.05
RAB40B-207ENST00000572603 PANK1Q8TE04 598 aa27.87■■■□□ 2.05
RAB40B-207ENST00000572603 FTSJ3Q8IY81 847 aaKnown RBP27.86■■■□□ 2.05
RAB40B-207ENST00000572603 PLA2G12BQ9BX93 195 aa27.86■■■□□ 2.05
RAB40B-207ENST00000572603 PDZRN3Q9UPQ7 1066 aa27.86■■■□□ 2.05
RAB40B-207ENST00000572603 SLX4Q8IY92 1834 aa27.85■■■□□ 2.05
RAB40B-207ENST00000572603 PDE8AO60658 829 aa27.85■■■□□ 2.05
RAB40B-207ENST00000572603 NLRP3Q96P20 1036 aa27.85■■■□□ 2.05
RAB40B-207ENST00000572603 C9orf78Q9NZ63 289 aaPredicted RBP27.85■■■□□ 2.05
RAB40B-207ENST00000572603 H0YIN7 160 aa27.84■■■□□ 2.05
RAB40B-207ENST00000572603 C20orf194Q5TEA3 1177 aa27.84■■■□□ 2.05
RAB40B-207ENST00000572603 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.84■■■□□ 2.05
RAB40B-207ENST00000572603 KAZALD1Q96I82 304 aa27.84■■■□□ 2.05
RAB40B-207ENST00000572603 SF3B3Q15393 1217 aaKnown RBP27.83■■■□□ 2.05
RAB40B-207ENST00000572603 SUCLG2Q96I99 432 aa27.83■■■□□ 2.05
RAB40B-207ENST00000572603 MEIS3Q99687 375 aa27.83■■■□□ 2.05
RAB40B-207ENST00000572603 CTSWP56202 376 aa27.82■■■□□ 2.04
RAB40B-207ENST00000572603 EPHA10Q5JZY3 1008 aa27.82■■■□□ 2.04
RAB40B-207ENST00000572603 STYK1Q6J9G0 422 aa27.82■■■□□ 2.04
RAB40B-207ENST00000572603 SPEF2Q9C093 1822 aa27.82■■■□□ 2.04
RAB40B-207ENST00000572603 MS4A1P11836 297 aa27.81■■■□□ 2.04
RAB40B-207ENST00000572603 HSP90B1P14625 803 aaKnown RBP27.81■■■□□ 2.04
RAB40B-207ENST00000572603 NPR1P16066 1061 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms