RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 RPGRQ92834 1020 aaKnown RBP21.72■■□□□ 1.07
RAB40B-205ENST00000571880 PRKRIP1Q9H875 184 aaPredicted RBP21.72■■□□□ 1.07
RAB40B-205ENST00000571880 POTEIP0CG38 1075 aa21.71■■□□□ 1.07
RAB40B-205ENST00000571880 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
RAB40B-205ENST00000571880 FKBP4Q02790 459 aaKnown RBP eCLIP21.71■■□□□ 1.07
RAB40B-205ENST00000571880 ZNF34Q8IZ26 560 aa21.71■■□□□ 1.07
RAB40B-205ENST00000571880 RIC1Q4ADV7 1423 aa21.71■■□□□ 1.07
RAB40B-205ENST00000571880 CRY2Q49AN0 593 aa21.7■■□□□ 1.06
RAB40B-205ENST00000571880 DNAJC5GQ8N7S2 189 aa21.7■■□□□ 1.06
RAB40B-205ENST00000571880 XAGE3Q8WTP9 111 aa21.7■■□□□ 1.06
RAB40B-205ENST00000571880 SNED1Q8TER0 1413 aa21.7■■□□□ 1.06
RAB40B-205ENST00000571880 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
RAB40B-205ENST00000571880 COPS6Q7L5N1 327 aa21.68■■□□□ 1.06
RAB40B-205ENST00000571880 CHL1O00533 1208 aa21.67■■□□□ 1.06
RAB40B-205ENST00000571880 ALDH1B1P30837 517 aa21.67■■□□□ 1.06
RAB40B-205ENST00000571880 SYNE4Q8N205 404 aa21.67■■□□□ 1.06
RAB40B-205ENST00000571880 IARSP41252 1262 aaKnown RBP21.66■■□□□ 1.06
RAB40B-205ENST00000571880 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
RAB40B-205ENST00000571880 BABAM1Q9NWV8 329 aa21.66■■□□□ 1.06
RAB40B-205ENST00000571880 PPEF1O14829 653 aaPredicted RBP21.65■■□□□ 1.06
RAB40B-205ENST00000571880 HDGFL1Q5TGJ6 251 aa21.65■■□□□ 1.06
RAB40B-205ENST00000571880 RTKN2Q8IZC4 609 aa21.65■■□□□ 1.06
RAB40B-205ENST00000571880 KLRG1Q96E93 195 aa21.65■■□□□ 1.06
RAB40B-205ENST00000571880 UTP14AQ9BVJ6 771 aaKnown RBP21.65■■□□□ 1.06
RAB40B-205ENST00000571880 LTBP1Q14766 1721 aa21.65■■□□□ 1.06
RAB40B-205ENST00000571880 PARP10Q53GL7 1025 aa21.64■■□□□ 1.05
RAB40B-205ENST00000571880 ADAMTSL1Q8N6G6 1762 aa21.64■■□□□ 1.05
RAB40B-205ENST00000571880 COL4A1P02462 1669 aa21.63■■□□□ 1.05
RAB40B-205ENST00000571880 APAF1O14727 1248 aa21.63■■□□□ 1.05
RAB40B-205ENST00000571880 HCLS1P14317 486 aaPredicted RBP21.63■■□□□ 1.05
RAB40B-205ENST00000571880 RBM17Q96I25 401 aaKnown RBP21.63■■□□□ 1.05
RAB40B-205ENST00000571880 DDX21Q9NR30 783 aaKnown RBP eCLIP21.63■■□□□ 1.05
RAB40B-205ENST00000571880 MBIPQ9NS73 344 aa21.63■■□□□ 1.05
RAB40B-205ENST00000571880 RNF123Q5XPI4 1314 aa21.62■■□□□ 1.05
RAB40B-205ENST00000571880 HOXA10P31260 410 aaPredicted RBP21.62■■□□□ 1.05
RAB40B-205ENST00000571880 EAPPQ56P03 285 aaPredicted RBP21.62■■□□□ 1.05
RAB40B-205ENST00000571880 NLRP10Q86W26 655 aa21.62■■□□□ 1.05
RAB40B-205ENST00000571880 ABCC4O15439 1325 aa21.61■■□□□ 1.05
RAB40B-205ENST00000571880 CCDC184Q52MB2 194 aa21.61■■□□□ 1.05
RAB40B-205ENST00000571880 LRRC37AA6NMS7 1700 aa21.6■■□□□ 1.05
RAB40B-205ENST00000571880 DUSP27Q5VZP5 1158 aa21.6■■□□□ 1.05
RAB40B-205ENST00000571880 CHADLQ6NUI6 762 aa21.6■■□□□ 1.05
RAB40B-205ENST00000571880 NLRP3Q96P20 1036 aa21.6■■□□□ 1.05
RAB40B-205ENST00000571880 ELL2O00472 640 aaPredicted RBP21.59■■□□□ 1.05
RAB40B-205ENST00000571880 HSP90AB3PQ58FF7 597 aa21.59■■□□□ 1.05
RAB40B-205ENST00000571880 L3MBTL3Q96JM7 780 aaPredicted RBP21.59■■□□□ 1.05
RAB40B-205ENST00000571880 CRAMP1Q96RY5 1269 aa21.59■■□□□ 1.05
RAB40B-205ENST00000571880 PSMD1Q99460 953 aa21.59■■□□□ 1.05
RAB40B-205ENST00000571880 TAF1DQ9H5J8 278 aaPredicted RBP21.59■■□□□ 1.05
RAB40B-205ENST00000571880 TRMT112Q9UI30 125 aaKnown RBP21.59■■□□□ 1.05
RAB40B-205ENST00000571880 GJA3Q9Y6H8 435 aa21.59■■□□□ 1.05
RAB40B-205ENST00000571880 SPEF2Q9C093 1822 aa21.59■■□□□ 1.05
RAB40B-205ENST00000571880 IQCA1LA6NCM1 817 aa21.58■■□□□ 1.05
RAB40B-205ENST00000571880 ATP5J2-PTCD1G3V325 749 aa21.58■■□□□ 1.05
RAB40B-205ENST00000571880 TCIRG1Q13488 830 aa21.58■■□□□ 1.05
RAB40B-205ENST00000571880 RTL5Q5HYW3 569 aaPredicted RBP21.58■■□□□ 1.05
RAB40B-205ENST00000571880 LARGE2Q8N3Y3 721 aa21.58■■□□□ 1.05
RAB40B-205ENST00000571880 CFAP44Q96MT7 982 aa21.58■■□□□ 1.05
RAB40B-205ENST00000571880 JDP2Q8WYK2 163 aa21.57■■□□□ 1.04
RAB40B-205ENST00000571880 DUOX1Q9NRD9 1551 aa21.57■■□□□ 1.04
RAB40B-205ENST00000571880 SH3TC1Q8TE82 1336 aa21.56■■□□□ 1.04
RAB40B-205ENST00000571880 FZD9O00144 591 aa21.56■■□□□ 1.04
RAB40B-205ENST00000571880 AOC3Q16853 763 aa21.56■■□□□ 1.04
RAB40B-205ENST00000571880 HACL1Q9UJ83 578 aa21.56■■□□□ 1.04
RAB40B-205ENST00000571880 PPIP5K2O43314 1243 aa21.55■■□□□ 1.04
RAB40B-205ENST00000571880 EPHX2P34913 555 aa21.55■■□□□ 1.04
RAB40B-205ENST00000571880 CC2D2BQ6DHV5 1058 aa21.55■■□□□ 1.04
RAB40B-205ENST00000571880 PLBD2Q8NHP8 589 aa21.55■■□□□ 1.04
RAB40B-205ENST00000571880 DBF4Q9UBU7 674 aaPredicted RBP21.55■■□□□ 1.04
RAB40B-205ENST00000571880 CLEC11AQ9Y240 323 aa21.55■■□□□ 1.04
RAB40B-205ENST00000571880 HOXB7P09629 217 aa21.54■■□□□ 1.04
RAB40B-205ENST00000571880 SLC10A5Q5PT55 438 aa21.54■■□□□ 1.04
RAB40B-205ENST00000571880 LDHDQ86WU2 507 aa21.54■■□□□ 1.04
RAB40B-205ENST00000571880 JMYQ8N9B5 988 aa21.54■■□□□ 1.04
RAB40B-205ENST00000571880 ZNF853P0CG23 659 aa21.53■■□□□ 1.04
RAB40B-205ENST00000571880 EIF6P56537 245 aaKnown RBP21.53■■□□□ 1.04
RAB40B-205ENST00000571880 ANKRD13DQ6ZTN6 518 aa21.53■■□□□ 1.04
RAB40B-205ENST00000571880 NIM1KQ8IY84 436 aa21.53■■□□□ 1.04
RAB40B-205ENST00000571880 FAM89AQ96GI7 184 aa21.53■■□□□ 1.04
RAB40B-205ENST00000571880 PHAXQ9H814 394 aaKnown RBP21.53■■□□□ 1.04
RAB40B-205ENST00000571880 IFT57Q9NWB7 429 aa21.53■■□□□ 1.04
RAB40B-205ENST00000571880 MKRN1Q9UHC7 482 aaKnown RBP21.53■■□□□ 1.04
RAB40B-205ENST00000571880 ATP6V0A2Q9Y487 856 aa21.53■■□□□ 1.04
RAB40B-205ENST00000571880 TRPM7Q96QT4 1865 aa21.52■■□□□ 1.04
RAB40B-205ENST00000571880 IFFO2Q5TF58 517 aa21.52■■□□□ 1.04
RAB40B-205ENST00000571880 GPC2Q8N158 579 aa21.52■■□□□ 1.04
RAB40B-205ENST00000571880 MYH3P11055 1940 aa21.52■■□□□ 1.04
RAB40B-205ENST00000571880 GNAI1P63096 354 aa21.51■■□□□ 1.03
RAB40B-205ENST00000571880 MAP1SQ66K74 1059 aaPredicted RBP21.51■■□□□ 1.03
RAB40B-205ENST00000571880 DDX46Q7L014 1031 aaKnown RBP21.51■■□□□ 1.03
RAB40B-205ENST00000571880 C8orf58Q8NAV2 365 aa21.51■■□□□ 1.03
RAB40B-205ENST00000571880 TSR2Q969E8 191 aaKnown RBP21.51■■□□□ 1.03
RAB40B-205ENST00000571880 ISCA1Q9BUE6 129 aa21.51■■□□□ 1.03
RAB40B-205ENST00000571880 TMX4Q9H1E5 349 aaPredicted RBP21.51■■□□□ 1.03
RAB40B-205ENST00000571880 HYPKQ9NX55 129 aa21.51■■□□□ 1.03
RAB40B-205ENST00000571880 PCNTO95613 3336 aa21.49■■□□□ 1.03
RAB40B-205ENST00000571880 GRAPQ13588 217 aa21.49■■□□□ 1.03
RAB40B-205ENST00000571880 DPP8Q6V1X1 898 aaPredicted RBP21.49■■□□□ 1.03
RAB40B-205ENST00000571880 GRAPLQ8TC17 118 aaPredicted RBP21.49■■□□□ 1.03
RAB40B-205ENST00000571880 PASKQ96RG2 1323 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms