RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 HOXB7P09629 217 aa17.73■□□□□ 0.43
PRPF8-202ENST00000571346 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
PRPF8-202ENST00000571346 HSP90AB3PQ58FF7 597 aa17.73■□□□□ 0.43
PRPF8-202ENST00000571346 UTP14AQ9BVJ6 771 aaKnown RBP17.73■□□□□ 0.43
PRPF8-202ENST00000571346 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
PRPF8-202ENST00000571346 LAMB2P55268 1798 aa17.72■□□□□ 0.43
PRPF8-202ENST00000571346 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
PRPF8-202ENST00000571346 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
PRPF8-202ENST00000571346 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
PRPF8-202ENST00000571346 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
PRPF8-202ENST00000571346 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
PRPF8-202ENST00000571346 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
PRPF8-202ENST00000571346 ZNF277Q9NRM2 450 aaPredicted RBP17.72■□□□□ 0.43
PRPF8-202ENST00000571346 GNAI1P63096 354 aa17.71■□□□□ 0.43
PRPF8-202ENST00000571346 C3orf67Q6ZVT6 689 aa17.71■□□□□ 0.43
PRPF8-202ENST00000571346 MRS2Q9HD23 443 aa17.71■□□□□ 0.43
PRPF8-202ENST00000571346 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.43
PRPF8-202ENST00000571346 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
PRPF8-202ENST00000571346 ANP32CO43423 234 aa17.7■□□□□ 0.42
PRPF8-202ENST00000571346 VEGFAP15692 232 aaPredicted RBP17.7■□□□□ 0.42
PRPF8-202ENST00000571346 APLP1P51693 650 aa17.7■□□□□ 0.42
PRPF8-202ENST00000571346 RTKN2Q8IZC4 609 aa17.7■□□□□ 0.42
PRPF8-202ENST00000571346 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
PRPF8-202ENST00000571346 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
PRPF8-202ENST00000571346 PPEF1O14829 653 aaPredicted RBP17.69■□□□□ 0.42
PRPF8-202ENST00000571346 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
PRPF8-202ENST00000571346 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
PRPF8-202ENST00000571346 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
PRPF8-202ENST00000571346 RBM17Q96I25 401 aaKnown RBP17.69■□□□□ 0.42
PRPF8-202ENST00000571346 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
PRPF8-202ENST00000571346 HOXA10P31260 410 aaPredicted RBP17.68■□□□□ 0.42
PRPF8-202ENST00000571346 FSTL1Q12841 308 aa17.68■□□□□ 0.42
PRPF8-202ENST00000571346 TCIRG1Q13488 830 aa17.68■□□□□ 0.42
PRPF8-202ENST00000571346 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
PRPF8-202ENST00000571346 SNED1Q8TER0 1413 aa17.68■□□□□ 0.42
PRPF8-202ENST00000571346 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
PRPF8-202ENST00000571346 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
PRPF8-202ENST00000571346 DDNO94850 711 aaPredicted RBP17.67■□□□□ 0.42
PRPF8-202ENST00000571346 HCLS1P14317 486 aaPredicted RBP17.67■□□□□ 0.42
PRPF8-202ENST00000571346 PLBD2Q8NHP8 589 aa17.67■□□□□ 0.42
PRPF8-202ENST00000571346 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
PRPF8-202ENST00000571346 ABCC4O15439 1325 aa17.67■□□□□ 0.42
PRPF8-202ENST00000571346 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
PRPF8-202ENST00000571346 ZNF541Q9H0D2 1346 aa17.67■□□□□ 0.42
PRPF8-202ENST00000571346 IARSP41252 1262 aaKnown RBP17.66■□□□□ 0.42
PRPF8-202ENST00000571346 GOLGA2Q08379 1002 aa17.66■□□□□ 0.42
PRPF8-202ENST00000571346 ANKRD13DQ6ZTN6 518 aa17.66■□□□□ 0.42
PRPF8-202ENST00000571346 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
PRPF8-202ENST00000571346 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
PRPF8-202ENST00000571346 CC2D2BQ6DHV5 1058 aa17.65■□□□□ 0.42
PRPF8-202ENST00000571346 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
PRPF8-202ENST00000571346 CRAMP1Q96RY5 1269 aa17.65■□□□□ 0.42
PRPF8-202ENST00000571346 PSMD1Q99460 953 aa17.65■□□□□ 0.42
PRPF8-202ENST00000571346 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
PRPF8-202ENST00000571346 HTRA3P83110 453 aa17.64■□□□□ 0.41
PRPF8-202ENST00000571346 C8orf58Q8NAV2 365 aa17.64■□□□□ 0.41
PRPF8-202ENST00000571346 COL4A5P29400 1685 aa17.64■□□□□ 0.41
PRPF8-202ENST00000571346 POTECB2RU33 542 aa17.63■□□□□ 0.41
PRPF8-202ENST00000571346 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
PRPF8-202ENST00000571346 SLC10A5Q5PT55 438 aa17.63■□□□□ 0.41
PRPF8-202ENST00000571346 JDP2Q8WYK2 163 aa17.63■□□□□ 0.41
PRPF8-202ENST00000571346 SCN4AP35499 1836 aa17.63■□□□□ 0.41
PRPF8-202ENST00000571346 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
PRPF8-202ENST00000571346 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
PRPF8-202ENST00000571346 RIC3Q7Z5B4 369 aa17.62■□□□□ 0.41
PRPF8-202ENST00000571346 PHAXQ9H814 394 aaKnown RBP17.62■□□□□ 0.41
PRPF8-202ENST00000571346 CCDC30Q5VVM6 783 aa17.61■□□□□ 0.41
PRPF8-202ENST00000571346 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
PRPF8-202ENST00000571346 LARGE2Q8N3Y3 721 aa17.61■□□□□ 0.41
PRPF8-202ENST00000571346 FAM89AQ96GI7 184 aa17.61■□□□□ 0.41
PRPF8-202ENST00000571346 ISCA1Q9BUE6 129 aa17.61■□□□□ 0.41
PRPF8-202ENST00000571346 TAF1P21675 1872 aa17.61■□□□□ 0.41
PRPF8-202ENST00000571346 CCDC27Q2M243 656 aa17.6■□□□□ 0.41
PRPF8-202ENST00000571346 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
PRPF8-202ENST00000571346 TSPYL6Q8N831 410 aa17.6■□□□□ 0.41
PRPF8-202ENST00000571346 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
PRPF8-202ENST00000571346 MYD88Q99836 296 aa17.6■□□□□ 0.41
PRPF8-202ENST00000571346 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
PRPF8-202ENST00000571346 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
PRPF8-202ENST00000571346 LRRC37AA6NMS7 1700 aa17.59■□□□□ 0.41
PRPF8-202ENST00000571346 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
PRPF8-202ENST00000571346 POTEIP0CG38 1075 aa17.59■□□□□ 0.41
PRPF8-202ENST00000571346 POTEJP0CG39 1038 aa17.59■□□□□ 0.41
PRPF8-202ENST00000571346 GRAPQ13588 217 aa17.59■□□□□ 0.41
PRPF8-202ENST00000571346 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
PRPF8-202ENST00000571346 GJA3Q9Y6H8 435 aa17.59■□□□□ 0.41
PRPF8-202ENST00000571346 PCNTO95613 3336 aa17.59■□□□□ 0.41
PRPF8-202ENST00000571346 FZD9O00144 591 aa17.58■□□□□ 0.4
PRPF8-202ENST00000571346 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
PRPF8-202ENST00000571346 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
PRPF8-202ENST00000571346 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.4
PRPF8-202ENST00000571346 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.4
PRPF8-202ENST00000571346 NIM1KQ8IY84 436 aa17.58■□□□□ 0.4
PRPF8-202ENST00000571346 STK31Q9BXU1 1019 aa17.58■□□□□ 0.4
PRPF8-202ENST00000571346 CHMP4AQ9BY43 222 aa17.58■□□□□ 0.4
PRPF8-202ENST00000571346 IRS4O14654 1257 aaPredicted RBP17.57■□□□□ 0.4
PRPF8-202ENST00000571346 AOC3Q16853 763 aa17.57■□□□□ 0.4
PRPF8-202ENST00000571346 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
PRPF8-202ENST00000571346 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
PRPF8-202ENST00000571346 GPC2Q8N158 579 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms