RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 USP16Q9Y5T5 823 aa28.01■■■□□ 2.07
UBFD1-210ENST00000571064 KDM3BQ7LBC6 1761 aa28.01■■■□□ 2.07
UBFD1-210ENST00000571064 ADAMTSL1Q8N6G6 1762 aa28.01■■■□□ 2.07
UBFD1-210ENST00000571064 RNF123Q5XPI4 1314 aa28■■■□□ 2.07
UBFD1-210ENST00000571064 ABHD8Q96I13 439 aa28■■■□□ 2.07
UBFD1-210ENST00000571064 ZNF521Q96K83 1311 aa27.98■■■□□ 2.07
UBFD1-210ENST00000571064 SLC34A2O95436 690 aa27.98■■■□□ 2.07
UBFD1-210ENST00000571064 NGEFQ8N5V2 710 aa27.98■■■□□ 2.07
UBFD1-210ENST00000571064 PRAMEF22A3QJZ6 481 aa27.97■■■□□ 2.07
UBFD1-210ENST00000571064 KLRG2A4D1S0 409 aaPredicted RBP27.97■■■□□ 2.07
UBFD1-210ENST00000571064 ZNF853P0CG23 659 aa27.97■■■□□ 2.07
UBFD1-210ENST00000571064 CLEC4GQ6UXB4 293 aa27.97■■■□□ 2.07
UBFD1-210ENST00000571064 PNMA8AQ86V59 439 aaPredicted RBP27.97■■■□□ 2.07
UBFD1-210ENST00000571064 WDR33Q9C0J8 1336 aaKnown RBP27.96■■■□□ 2.07
UBFD1-210ENST00000571064 FZD9O00144 591 aa27.96■■■□□ 2.07
UBFD1-210ENST00000571064 CHL1O00533 1208 aa27.96■■■□□ 2.07
UBFD1-210ENST00000571064 FAM161AQ3B820 660 aa27.96■■■□□ 2.07
UBFD1-210ENST00000571064 RTKN2Q8IZC4 609 aa27.96■■■□□ 2.07
UBFD1-210ENST00000571064 IARSP41252 1262 aaKnown RBP27.95■■■□□ 2.06
UBFD1-210ENST00000571064 ABT1Q9ULW3 272 aaKnown RBP27.95■■■□□ 2.06
UBFD1-210ENST00000571064 FAM177BA6PVY3 158 aa27.94■■■□□ 2.06
UBFD1-210ENST00000571064 TPTE2Q6XPS3 522 aa27.94■■■□□ 2.06
UBFD1-210ENST00000571064 SYNE4Q8N205 404 aa27.94■■■□□ 2.06
UBFD1-210ENST00000571064 CFAP44Q96MT7 982 aa27.94■■■□□ 2.06
UBFD1-210ENST00000571064 BABAM1Q9NWV8 329 aa27.94■■■□□ 2.06
UBFD1-210ENST00000571064 NIP7Q9Y221 180 aaKnown RBP eCLIP27.94■■■□□ 2.06
UBFD1-210ENST00000571064 ZNF652Q9Y2D9 606 aa27.94■■■□□ 2.06
UBFD1-210ENST00000571064 LAS1LQ9Y4W2 734 aaKnown RBP27.94■■■□□ 2.06
UBFD1-210ENST00000571064 MAP2K1Q02750 393 aaPredicted RBP27.93■■■□□ 2.06
UBFD1-210ENST00000571064 WDR63Q8IWG1 891 aa27.93■■■□□ 2.06
UBFD1-210ENST00000571064 IFT57Q9NWB7 429 aa27.93■■■□□ 2.06
UBFD1-210ENST00000571064 TSPYL4Q9UJ04 414 aa27.93■■■□□ 2.06
UBFD1-210ENST00000571064 CALD1Q05682 793 aaKnown RBP27.92■■■□□ 2.06
UBFD1-210ENST00000571064 GPC2Q8N158 579 aa27.92■■■□□ 2.06
UBFD1-210ENST00000571064 SPINK5Q9NQ38 1064 aaPredicted RBP27.92■■■□□ 2.06
UBFD1-210ENST00000571064 HNRNPUQ00839 825 aaKnown RBP eCLIP27.91■■■□□ 2.06
UBFD1-210ENST00000571064 IL16Q14005 1332 aa27.91■■■□□ 2.06
UBFD1-210ENST00000571064 GNAI1P63096 354 aa27.9■■■□□ 2.06
UBFD1-210ENST00000571064 FMR1Q06787 632 aaKnown RBP eCLIP27.9■■■□□ 2.06
UBFD1-210ENST00000571064 DDX21Q9NR30 783 aaKnown RBP eCLIP27.9■■■□□ 2.06
UBFD1-210ENST00000571064 MBIPQ9NS73 344 aa27.9■■■□□ 2.06
UBFD1-210ENST00000571064 EIF4A1P60842 406 aaKnown RBP27.89■■■□□ 2.06
UBFD1-210ENST00000571064 NBPF26B4DH59 902 aa27.88■■■□□ 2.05
UBFD1-210ENST00000571064 ALDH1B1P30837 517 aa27.88■■■□□ 2.05
UBFD1-210ENST00000571064 NBPF10Q6P3W6 841 aaKnown RBP27.88■■■□□ 2.05
UBFD1-210ENST00000571064 NBPF15Q8N660 670 aa27.88■■■□□ 2.05
UBFD1-210ENST00000571064 GJA3Q9Y6H8 435 aa27.88■■■□□ 2.05
UBFD1-210ENST00000571064 SNRPA1P09661 255 aaKnown RBP27.87■■■□□ 2.05
UBFD1-210ENST00000571064 JDP2Q8WYK2 163 aa27.87■■■□□ 2.05
UBFD1-210ENST00000571064 SNED1Q8TER0 1413 aa27.86■■■□□ 2.05
UBFD1-210ENST00000571064 HLFQ16534 295 aa27.86■■■□□ 2.05
UBFD1-210ENST00000571064 PAXIP1Q6ZW49 1069 aaPredicted RBP27.86■■■□□ 2.05
UBFD1-210ENST00000571064 CAPNS2Q96L46 248 aa27.86■■■□□ 2.05
UBFD1-210ENST00000571064 COL4A5P29400 1685 aa27.85■■■□□ 2.05
UBFD1-210ENST00000571064 LTBP1Q14766 1721 aa27.85■■■□□ 2.05
UBFD1-210ENST00000571064 GRM1Q13255 1194 aa27.85■■■□□ 2.05
UBFD1-210ENST00000571064 TSR2Q969E8 191 aaKnown RBP27.85■■■□□ 2.05
UBFD1-210ENST00000571064 PSMD1Q99460 953 aa27.85■■■□□ 2.05
UBFD1-210ENST00000571064 CCDC85CA6NKD9 419 aa27.84■■■□□ 2.05
UBFD1-210ENST00000571064 GTF2E1P29083 439 aaPredicted RBP27.84■■■□□ 2.05
UBFD1-210ENST00000571064 KRT24Q2M2I5 525 aa27.84■■■□□ 2.05
UBFD1-210ENST00000571064 EPS15P42566 896 aa27.83■■■□□ 2.05
UBFD1-210ENST00000571064 EIF6P56537 245 aaKnown RBP27.83■■■□□ 2.05
UBFD1-210ENST00000571064 CYP4F22Q6NT55 531 aa27.83■■■□□ 2.05
UBFD1-210ENST00000571064 RGL2O15211 777 aa27.82■■■□□ 2.04
UBFD1-210ENST00000571064 LMOD1P29536 600 aaPredicted RBP27.82■■■□□ 2.04
UBFD1-210ENST00000571064 CDCA7LQ96GN5 454 aa27.82■■■□□ 2.04
UBFD1-210ENST00000571064 GPR101Q96P66 508 aaPredicted RBP27.82■■■□□ 2.04
UBFD1-210ENST00000571064 SCNN1DP51172 638 aa27.81■■■□□ 2.04
UBFD1-210ENST00000571064 GOLGA2Q08379 1002 aa27.81■■■□□ 2.04
UBFD1-210ENST00000571064 BEGAINQ9BUH8 593 aa27.81■■■□□ 2.04
UBFD1-210ENST00000571064 FANCIQ9NVI1 1328 aa27.81■■■□□ 2.04
UBFD1-210ENST00000571064 THSD7BQ9C0I4 1608 aa27.81■■■□□ 2.04
UBFD1-210ENST00000571064 TRAF5O00463 557 aa27.8■■■□□ 2.04
UBFD1-210ENST00000571064 ECE1P42892 770 aa27.8■■■□□ 2.04
UBFD1-210ENST00000571064 MLLT1Q03111 559 aaPredicted RBP27.8■■■□□ 2.04
UBFD1-210ENST00000571064 CRY2Q49AN0 593 aa27.8■■■□□ 2.04
UBFD1-210ENST00000571064 CST9Q5W186 159 aa27.8■■■□□ 2.04
UBFD1-210ENST00000571064 NUTM1Q86Y26 1132 aa27.8■■■□□ 2.04
UBFD1-210ENST00000571064 TSKSQ9UJT2 592 aa27.8■■■□□ 2.04
UBFD1-210ENST00000571064 ABCC12Q96J65 1359 aa27.8■■■□□ 2.04
UBFD1-210ENST00000571064 SLFN5Q08AF3 891 aa27.79■■■□□ 2.04
UBFD1-210ENST00000571064 SLC51AQ86UW1 340 aa27.79■■■□□ 2.04
UBFD1-210ENST00000571064 C8orf58Q8NAV2 365 aa27.78■■■□□ 2.04
UBFD1-210ENST00000571064 ZBED9Q6R2W3 1325 aa27.77■■■□□ 2.04
UBFD1-210ENST00000571064 CC2D2BQ6DHV5 1058 aa27.77■■■□□ 2.04
UBFD1-210ENST00000571064 LARGE2Q8N3Y3 721 aa27.77■■■□□ 2.04
UBFD1-210ENST00000571064 LAMB4A4D0S4 1761 aa27.76■■■□□ 2.03
UBFD1-210ENST00000571064 RGS19P49795 217 aa27.76■■■□□ 2.03
UBFD1-210ENST00000571064 TRMT2AQ8IZ69 625 aaKnown RBP27.76■■■□□ 2.03
UBFD1-210ENST00000571064 TLL2Q9Y6L7 1015 aa27.76■■■□□ 2.03
UBFD1-210ENST00000571064 E9PSI1 815 aa27.75■■■□□ 2.03
UBFD1-210ENST00000571064 AOC2O75106 756 aa27.75■■■□□ 2.03
UBFD1-210ENST00000571064 USP50Q70EL3 339 aaPredicted RBP27.75■■■□□ 2.03
UBFD1-210ENST00000571064 MYH16Q9H6N6 1097 aa27.75■■■□□ 2.03
UBFD1-210ENST00000571064 TSPYL6Q8N831 410 aa27.74■■■□□ 2.03
UBFD1-210ENST00000571064 RPGRQ92834 1020 aaKnown RBP27.74■■■□□ 2.03
UBFD1-210ENST00000571064 NYXQ9GZU5 481 aa27.74■■■□□ 2.03
UBFD1-210ENST00000571064 TRPM7Q96QT4 1865 aa27.73■■■□□ 2.03
UBFD1-210ENST00000571064 TCERG1O14776 1098 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms