RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 TRIM28Q13263 835 aaKnown RBP29.27■■■□□ 2.28
SLC12A4-205ENST00000570616 MASTLQ96GX5 879 aa29.27■■■□□ 2.28
SLC12A4-205ENST00000570616 GOLGB1Q14789 3259 aaKnown RBP29.26■■■□□ 2.27
SLC12A4-205ENST00000570616 G2E3Q7L622 706 aa29.26■■■□□ 2.27
SLC12A4-205ENST00000570616 TRMT2AQ8IZ69 625 aaKnown RBP29.26■■■□□ 2.27
SLC12A4-205ENST00000570616 ZNF622Q969S3 477 aaKnown RBP eCLIP29.26■■■□□ 2.27
SLC12A4-205ENST00000570616 ATP5J2-PTCD1G3V325 749 aa29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 NPR1P16066 1061 aa29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 YY1P25490 414 aa29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 FLIIQ13045 1269 aa29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 CRY2Q49AN0 593 aa29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 KSR2Q6VAB6 950 aa29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 ADCY9O60503 1353 aa29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 TNRC6CQ9HCJ0 1690 aaKnown RBP29.25■■■□□ 2.27
SLC12A4-205ENST00000570616 SLC10A5Q5PT55 438 aa29.24■■■□□ 2.27
SLC12A4-205ENST00000570616 CNKSR1Q969H4 720 aa29.24■■■□□ 2.27
SLC12A4-205ENST00000570616 METTL22Q9BUU2 404 aaPredicted RBP29.24■■■□□ 2.27
SLC12A4-205ENST00000570616 TRMT112Q9UI30 125 aaKnown RBP29.24■■■□□ 2.27
SLC12A4-205ENST00000570616 MAP3K2Q9Y2U5 619 aa29.24■■■□□ 2.27
SLC12A4-205ENST00000570616 SH3TC1Q8TE82 1336 aa29.23■■■□□ 2.27
SLC12A4-205ENST00000570616 ARFGEF1Q9Y6D6 1849 aa29.23■■■□□ 2.27
SLC12A4-205ENST00000570616 PI4KAP2A4QPH2 592 aa29.23■■■□□ 2.27
SLC12A4-205ENST00000570616 PI4KAP1Q8N8J0 262 aa29.23■■■□□ 2.27
SLC12A4-205ENST00000570616 MYD88Q99836 296 aa29.23■■■□□ 2.27
SLC12A4-205ENST00000570616 UTRNP46939 3433 aa29.23■■■□□ 2.27
SLC12A4-205ENST00000570616 HNRNPUQ00839 825 aaKnown RBP eCLIP29.22■■■□□ 2.27
SLC12A4-205ENST00000570616 ARHGAP27Q6ZUM4 889 aa29.2■■■□□ 2.26
SLC12A4-205ENST00000570616 FKBP5Q13451 457 aaPredicted RBP29.19■■■□□ 2.26
SLC12A4-205ENST00000570616 PRPF40BQ6NWY9 871 aaKnown RBP29.19■■■□□ 2.26
SLC12A4-205ENST00000570616 CCDC191Q8NCU4 936 aa29.19■■■□□ 2.26
SLC12A4-205ENST00000570616 ZNF428Q96B54 188 aa29.19■■■□□ 2.26
SLC12A4-205ENST00000570616 NLRP3Q96P20 1036 aa29.18■■■□□ 2.26
SLC12A4-205ENST00000570616 CHD4Q14839 1912 aa29.18■■■□□ 2.26
SLC12A4-205ENST00000570616 NEXNQ0ZGT2 675 aa29.17■■■□□ 2.26
SLC12A4-205ENST00000570616 C3orf67Q6ZVT6 689 aa29.17■■■□□ 2.26
SLC12A4-205ENST00000570616 SYNE4Q8N205 404 aa29.17■■■□□ 2.26
SLC12A4-205ENST00000570616 CT47B1P0C2W7 299 aaPredicted RBP29.16■■■□□ 2.26
SLC12A4-205ENST00000570616 HOXA10P31260 410 aaPredicted RBP29.16■■■□□ 2.26
SLC12A4-205ENST00000570616 RPGRQ92834 1020 aaKnown RBP29.16■■■□□ 2.26
SLC12A4-205ENST00000570616 CWC25Q9NXE8 425 aaPredicted RBP29.16■■■□□ 2.26
SLC12A4-205ENST00000570616 HCLS1P14317 486 aaPredicted RBP29.15■■■□□ 2.26
SLC12A4-205ENST00000570616 ALDH1B1P30837 517 aa29.15■■■□□ 2.26
SLC12A4-205ENST00000570616 ZBTB38Q8NAP3 1195 aaPredicted RBP29.15■■■□□ 2.26
SLC12A4-205ENST00000570616 DNAAF4Q8WXU2 420 aa29.15■■■□□ 2.26
SLC12A4-205ENST00000570616 FAM89AQ96GI7 184 aa29.15■■■□□ 2.26
SLC12A4-205ENST00000570616 CACNA1FO60840 1977 aa29.15■■■□□ 2.26
SLC12A4-205ENST00000570616 IGKV5-2P06315 115 aa29.14■■■□□ 2.26
SLC12A4-205ENST00000570616 C21orf2O43822 256 aa29.13■■■□□ 2.25
SLC12A4-205ENST00000570616 RBM17Q96I25 401 aaKnown RBP29.13■■■□□ 2.25
SLC12A4-205ENST00000570616 PCCAP05165 728 aaPredicted RBP29.12■■■□□ 2.25
SLC12A4-205ENST00000570616 SOGA3Q5TF21 947 aa29.12■■■□□ 2.25
SLC12A4-205ENST00000570616 CRAMP1Q96RY5 1269 aa29.12■■■□□ 2.25
SLC12A4-205ENST00000570616 NEURL1BA8MQ27 555 aa29.11■■■□□ 2.25
SLC12A4-205ENST00000570616 MRPL50Q8N5N7 158 aaKnown RBP29.11■■■□□ 2.25
SLC12A4-205ENST00000570616 C7orf43Q8WVR3 580 aa29.11■■■□□ 2.25
SLC12A4-205ENST00000570616 IRS4O14654 1257 aaPredicted RBP29.1■■■□□ 2.25
SLC12A4-205ENST00000570616 HSP90B1P14625 803 aaKnown RBP29.1■■■□□ 2.25
SLC12A4-205ENST00000570616 ALDH1L2Q3SY69 923 aa29.1■■■□□ 2.25
SLC12A4-205ENST00000570616 SSH1Q8WYL5 1049 aa29.1■■■□□ 2.25
SLC12A4-205ENST00000570616 ZNF219Q9P2Y4 722 aaPredicted RBP29.1■■■□□ 2.25
SLC12A4-205ENST00000570616 ZBED9Q6R2W3 1325 aa29.1■■■□□ 2.25
SLC12A4-205ENST00000570616 SLX4Q8IY92 1834 aa29.1■■■□□ 2.25
SLC12A4-205ENST00000570616 CWF19L2Q2TBE0 894 aaKnown RBP29.09■■■□□ 2.25
SLC12A4-205ENST00000570616 RTL5Q5HYW3 569 aaPredicted RBP29.09■■■□□ 2.25
SLC12A4-205ENST00000570616 LINS1Q8NG48 757 aa29.09■■■□□ 2.25
SLC12A4-205ENST00000570616 NFKBIEO00221 500 aa29.08■■■□□ 2.25
SLC12A4-205ENST00000570616 F6X3S4 739 aa29.07■■■□□ 2.24
SLC12A4-205ENST00000570616 RASSF7Q02833 373 aa29.07■■■□□ 2.24
SLC12A4-205ENST00000570616 CCDC93Q567U6 631 aa29.07■■■□□ 2.24
SLC12A4-205ENST00000570616 DDX60Q8IY21 1712 aaKnown RBP29.07■■■□□ 2.24
SLC12A4-205ENST00000570616 CDHR2Q9BYE9 1310 aa29.07■■■□□ 2.24
SLC12A4-205ENST00000570616 SF3B3Q15393 1217 aaKnown RBP29.06■■■□□ 2.24
SLC12A4-205ENST00000570616 LAMB2P55268 1798 aa29.06■■■□□ 2.24
SLC12A4-205ENST00000570616 ABCC4O15439 1325 aa29.05■■■□□ 2.24
SLC12A4-205ENST00000570616 PTPRCP08575 1304 aa29.05■■■□□ 2.24
SLC12A4-205ENST00000570616 LTBP3Q9NS15 1303 aa29.05■■■□□ 2.24
SLC12A4-205ENST00000570616 BCL2L13Q9BXK5 485 aa29.05■■■□□ 2.24
SLC12A4-205ENST00000570616 GCKRQ14397 625 aa29.04■■■□□ 2.24
SLC12A4-205ENST00000570616 BEND3Q5T5X7 828 aa29.04■■■□□ 2.24
SLC12A4-205ENST00000570616 C9orf131Q5VYM1 1079 aa29.04■■■□□ 2.24
SLC12A4-205ENST00000570616 DDX46Q7L014 1031 aaKnown RBP29.04■■■□□ 2.24
SLC12A4-205ENST00000570616 SMC4Q9NTJ3 1288 aa29.04■■■□□ 2.24
SLC12A4-205ENST00000570616 PPEF1O14829 653 aaPredicted RBP29.03■■■□□ 2.24
SLC12A4-205ENST00000570616 ZNF784Q8NCA9 323 aaPredicted RBP29.03■■■□□ 2.24
SLC12A4-205ENST00000570616 TAOK3Q9H2K8 898 aa29.03■■■□□ 2.24
SLC12A4-205ENST00000570616 CACNA1SQ13698 1873 aa29.03■■■□□ 2.24
SLC12A4-205ENST00000570616 PDE8AO60658 829 aa29.02■■■□□ 2.24
SLC12A4-205ENST00000570616 LMNB1P20700 586 aa29.02■■■□□ 2.24
SLC12A4-205ENST00000570616 CC2D2BQ6DHV5 1058 aa29.02■■■□□ 2.24
SLC12A4-205ENST00000570616 JARID2Q92833 1246 aaPredicted RBP29.02■■■□□ 2.24
SLC12A4-205ENST00000570616 RNF181Q9P0P0 153 aa29.02■■■□□ 2.24
SLC12A4-205ENST00000570616 H7C1W4 665 aa29.01■■■□□ 2.23
SLC12A4-205ENST00000570616 GRAPQ13588 217 aa29.01■■■□□ 2.23
SLC12A4-205ENST00000570616 RTKN2Q8IZC4 609 aa29.01■■■□□ 2.23
SLC12A4-205ENST00000570616 GRAPLQ8TC17 118 aaPredicted RBP29.01■■■□□ 2.23
SLC12A4-205ENST00000570616 SNED1Q8TER0 1413 aa29.01■■■□□ 2.23
SLC12A4-205ENST00000570616 BBOX1O75936 387 aa29■■■□□ 2.23
SLC12A4-205ENST00000570616 PRELPP51888 382 aa29■■■□□ 2.23
SLC12A4-205ENST00000570616 BRPF1P55201 1214 aaPredicted RBP29■■■□□ 2.23
SLC12A4-205ENST00000570616 OLFM4Q6UX06 510 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms