RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PROSER3Q2NL68 480 aa8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 RIC3Q7Z5B4 369 aa8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 ITPRIPQ8IWB1 547 aa8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 DZIP1LQ8IYY4 767 aaKnown RBP8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 XAGE3Q8WTP9 111 aa8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 ARHGAP45Q92619 1136 aa8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 CLUAP1Q96AJ1 413 aa8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 PHAXQ9H814 394 aaKnown RBP8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 GPHNQ9NQX3 736 aaPredicted RBP8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
CTDNEP1-204ENST00000570484 PHF14O94880 888 aa8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 C4BP0C0L5 1744 aa8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 COL5A3P25940 1745 aaPredicted RBP8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 EN1Q05925 392 aaPredicted RBP8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 SLC4A10Q6U841 1118 aa8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 COPS6Q7L5N1 327 aa8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 DZIP3Q86Y13 1208 aaKnown RBP8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 ZNF652Q9Y2D9 606 aa8.33□□□□□ -1.08
CTDNEP1-204ENST00000570484 ABCC4O15439 1325 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 NBPF26B4DH59 902 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 CCT4P50991 539 aaKnown RBP8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 IRX6P78412 446 aaPredicted RBP8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 PDE3AQ14432 1141 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 PDIA6Q15084 440 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 NBPF14Q5TI25 921 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 NBPF10Q6P3W6 841 aaKnown RBP8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 G2E3Q7L622 706 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 NBPF15Q8N660 670 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 PLBD2Q8NHP8 589 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 DNAAF4Q8WXU2 420 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 CHMP4BQ9H444 224 aaKnown RBP8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 ZBTB3Q9H5J0 574 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 TFCP2L1Q9NZI6 479 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 MAP3K2Q9Y2U5 619 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 RREB1Q92766 1687 aa8.32□□□□□ -1.08
CTDNEP1-204ENST00000570484 RNF123Q5XPI4 1314 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 PI4KAP2A4QPH2 592 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 F6X3S4 739 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 ZPR1O75312 459 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 RPS6KA4O75676 772 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 SSFA2P28290 1259 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 RFC4P35249 363 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 EZH2Q15910 746 aaKnown RBP8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 HSP90AB3PQ58FF7 597 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 INTS5Q6P9B9 1019 aaKnown RBP8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 KSR2Q6VAB6 950 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 PI4KAP1Q8N8J0 262 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 PANK1Q8TE04 598 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 DDX19BQ9UMR2 479 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 ADCY9O60503 1353 aa8.31□□□□□ -1.08
CTDNEP1-204ENST00000570484 MAP3K15Q6ZN16 1313 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 ATP10DQ9P241 1426 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 CAMK2BQ13554 666 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 MVPQ14764 893 aaKnown RBP8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 TTLL7Q6ZT98 887 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 DEFB132Q7Z7B7 95 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 FLAD1Q8NFF5 587 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 CAMKK2Q96RR4 588 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 MYD88Q99836 296 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 SRCIN1Q9C0H9 1055 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
CTDNEP1-204ENST00000570484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 ERVV-1B6SEH8 477 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 NPHP1O15259 732 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 C20orf194Q5TEA3 1177 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 TMEM92Q6UXU6 159 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 LRP10Q7Z4F1 713 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 TMEM57Q8N5G2 664 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 CRBNQ96SW2 442 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 LARP6Q9BRS8 491 aaKnown RBP8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 TBC1D2BQ9UPU7 963 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 COG6Q9Y2V7 657 aa8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 ARIH1Q9Y4X5 557 aaPredicted RBP8.29□□□□□ -1.08
CTDNEP1-204ENST00000570484 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 ALDH1L1O75891 902 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 POTEJP0CG39 1038 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 RLBP1P12271 317 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 FOXK1P85037 733 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 INTS3Q68E01 1043 aaKnown RBP8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 GIGYF2Q6Y7W6 1299 aaKnown RBP8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 LINS1Q8NG48 757 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 UPF1Q92900 1129 aaKnown RBP eCLIP8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 WDR70Q9NW82 654 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 HDAC5Q9UQL6 1122 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 TNNQ9UQP3 1299 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 NUP188Q5SRE5 1749 aa8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 USP42Q9H9J4 1324 aaKnown RBP8.28□□□□□ -1.08
CTDNEP1-204ENST00000570484 CAMTA2O94983 1202 aa8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 GNAI3P08754 354 aa8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 UBTFL1P0CB47 393 aaPredicted RBP8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 AAMPQ13685 434 aa8.27□□□□□ -1.09
CTDNEP1-204ENST00000570484 SLC15A2Q16348 729 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms