RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ONECUT3O60422 494 aaPredicted RBP8.05□□□□□ -1.12
SMG1-217ENST00000569764 MST1RQ04912 1400 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 TPTE2Q6XPS3 522 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
SMG1-217ENST00000569764 EYA3Q99504 573 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 FBXO9Q9UK97 447 aaPredicted RBP8.05□□□□□ -1.12
SMG1-217ENST00000569764 SPATA31A1Q5TZJ5 1347 aa8.05□□□□□ -1.12
SMG1-217ENST00000569764 FYB1O15117 783 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 BDNFP23560 247 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 MFSD4BQ5TF39 518 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 PPP1R42Q7Z4L9 355 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 SMC5Q8IY18 1101 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 MPHOSPH6Q99547 160 aaKnown RBP8.04□□□□□ -1.12
SMG1-217ENST00000569764 FLT4P35916 1363 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 CRB1P82279 1406 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 MCM6Q14566 821 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 SLC15A2Q16348 729 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 ILDR2Q71H61 639 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 RPAINQ86UA6 219 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 SKAP1Q86WV1 359 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 MSL3Q8N5Y2 521 aaKnown RBP8.04□□□□□ -1.12
SMG1-217ENST00000569764 FMNL2Q96PY5 1086 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 GNL3LQ9NVN8 582 aaKnown RBP8.04□□□□□ -1.12
SMG1-217ENST00000569764 RGPD8O14715 1765 aaPredicted RBP8.04□□□□□ -1.12
SMG1-217ENST00000569764 APAF1O14727 1248 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 GNPATO15228 680 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 APLP1P51693 650 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 CSPP1Q1MSJ5 1256 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 DDX17Q92841 729 aaKnown RBP8.04□□□□□ -1.12
SMG1-217ENST00000569764 PRR36Q9H6K5 1346 aa8.04□□□□□ -1.12
SMG1-217ENST00000569764 ALDH1B1P30837 517 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 C20orf194Q5TEA3 1177 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 NBPF6Q5VWK0 638 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 NBPF5PQ86XG9 351 aaPredicted RBP8.03□□□□□ -1.12
SMG1-217ENST00000569764 HOOK2Q96ED9 719 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 NBPF4Q96M43 638 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 MYCBPQ99417 103 aaPredicted RBP8.03□□□□□ -1.12
SMG1-217ENST00000569764 LIG1P18858 919 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
SMG1-217ENST00000569764 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 MAP3K20Q9NYL2 800 aaKnown RBP8.03□□□□□ -1.12
SMG1-217ENST00000569764 COMMD10Q9Y6G5 202 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 ADGRB2O60241 1585 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 ERVV-2B6SEH9 535 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 ECE1P42892 770 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 CC2D1AQ6P1N0 951 aaPredicted RBP8.03□□□□□ -1.12
SMG1-217ENST00000569764 LARP1Q6PKG0 1096 aaKnown RBP8.03□□□□□ -1.12
SMG1-217ENST00000569764 CLEC4GQ6UXB4 293 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 ARHGEF10LQ9HCE6 1279 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 PIM2Q9P1W9 311 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 CD2APQ9Y5K6 639 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 MED1Q15648 1581 aaPredicted RBP8.03□□□□□ -1.12
SMG1-217ENST00000569764 LTBP4Q8N2S1 1624 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 HOXA2O43364 376 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 DUSP27Q5VZP5 1158 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 DEFB132Q7Z7B7 95 aa8.03□□□□□ -1.12
SMG1-217ENST00000569764 ANKRD26Q9UPS8 1709 aa8.02□□□□□ -1.12
SMG1-217ENST00000569764 MAP2P11137 1827 aaKnown RBP8.02□□□□□ -1.12
SMG1-217ENST00000569764 ZRANB2O95218 330 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMG1-217ENST00000569764 CCAR1Q8IX12 1150 aaKnown RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
SMG1-217ENST00000569764 KLF15Q9UIH9 416 aa8.02□□□□□ -1.13
SMG1-217ENST00000569764 DLC1Q96QB1 1528 aa8.02□□□□□ -1.13
SMG1-217ENST00000569764 KNDC1Q76NI1 1749 aa8.02□□□□□ -1.13
SMG1-217ENST00000569764 ZNF142P52746 1687 aaPredicted RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 MAP2K1Q02750 393 aaPredicted RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 C1orf131Q8NDD1 294 aaKnown RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 HDAC9Q9UKV0 1011 aa8.02□□□□□ -1.13
SMG1-217ENST00000569764 IQSEC3Q9UPP2 1182 aaPredicted RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 DIS3Q9Y2L1 958 aaKnown RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 RRP7AQ9Y3A4 280 aaKnown RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 KIF20BQ96Q89 1820 aa8.02□□□□□ -1.13
SMG1-217ENST00000569764 COL3A1P02461 1466 aaPredicted RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 RTL1A6NKG5 1358 aa8.02□□□□□ -1.13
SMG1-217ENST00000569764 CCDC85AQ96PX6 553 aaPredicted RBP8.02□□□□□ -1.13
SMG1-217ENST00000569764 EDC4Q6P2E9 1401 aaKnown RBP8.01□□□□□ -1.13
SMG1-217ENST00000569764 RPS6KC1Q96S38 1066 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 PLSCR2Q9NRY7 297 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 IPO8O15397 1037 aaKnown RBP8.01□□□□□ -1.13
SMG1-217ENST00000569764 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
SMG1-217ENST00000569764 OTUD7BQ6GQQ9 843 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 ZBTB7AO95365 584 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 ARHGEF25Q86VW2 580 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 ACRBPQ8NEB7 543 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 EXOC6Q8TAG9 804 aa8.01□□□□□ -1.13
SMG1-217ENST00000569764 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
SMG1-217ENST00000569764 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
SMG1-217ENST00000569764 INSRP06213 1382 aa8□□□□□ -1.13
SMG1-217ENST00000569764 MYO1BO43795 1136 aa8□□□□□ -1.13
SMG1-217ENST00000569764 HMGN5P82970 282 aaKnown RBP8□□□□□ -1.13
SMG1-217ENST00000569764 HSP90AB2PQ58FF8 381 aa8□□□□□ -1.13
SMG1-217ENST00000569764 AMOTL1Q8IY63 956 aa8□□□□□ -1.13
SMG1-217ENST00000569764 TRMT2AQ8IZ69 625 aaKnown RBP8□□□□□ -1.13
SMG1-217ENST00000569764 RNF25Q96BH1 459 aaPredicted RBP8□□□□□ -1.13
SMG1-217ENST00000569764 RCAN3Q9UKA8 241 aa8□□□□□ -1.13
SMG1-217ENST00000569764 ZNF16P17020 682 aaPredicted RBP8□□□□□ -1.13
SMG1-217ENST00000569764 PAF1Q8N7H5 531 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms