RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 RPAP1Q9BWH6 1393 aaPredicted RBP9.49□□□□□ -0.89
LINC00559-201ENST00000569476 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
LINC00559-201ENST00000569476 HS1BP3Q53T59 392 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 RBM42Q9BTD8 480 aaKnown RBP9.48□□□□□ -0.89
LINC00559-201ENST00000569476 LIMCH1Q9UPQ0 1083 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 PHF14O94880 888 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 PROSER3Q2NL68 480 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
LINC00559-201ENST00000569476 BICC1Q9H694 974 aaKnown RBP9.48□□□□□ -0.89
LINC00559-201ENST00000569476 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 SNX14Q9Y5W7 946 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 CCDC171Q6TFL3 1326 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 KAZALD1Q96I82 304 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 GRPEL1Q9HAV7 217 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 LMBRD1Q9NUN5 540 aa9.48□□□□□ -0.89
LINC00559-201ENST00000569476 APBB1O00213 710 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 RGL2O15211 777 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 ZKSCAN1P17029 563 aaPredicted RBP9.47□□□□□ -0.89
LINC00559-201ENST00000569476 ZC3H6P61129 1189 aaKnown RBP9.47□□□□□ -0.89
LINC00559-201ENST00000569476 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 ZNF496Q96IT1 587 aaPredicted RBP9.47□□□□□ -0.89
LINC00559-201ENST00000569476 AACSQ86V21 672 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 MAP4K1Q92918 833 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 ARAP2Q8WZ64 1704 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 LRP5O75197 1615 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 SH3TC1Q8TE82 1336 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 CDHR2Q9BYE9 1310 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 AK7Q96M32 723 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
LINC00559-201ENST00000569476 SASH1O94885 1247 aa9.46□□□□□ -0.89
LINC00559-201ENST00000569476 XPCQ01831 940 aaPredicted RBP9.46□□□□□ -0.89
LINC00559-201ENST00000569476 CCDC173Q0VFZ6 552 aa9.46□□□□□ -0.89
LINC00559-201ENST00000569476 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.89
LINC00559-201ENST00000569476 COPS6Q7L5N1 327 aa9.46□□□□□ -0.89
LINC00559-201ENST00000569476 LAMB2P55268 1798 aa9.46□□□□□ -0.89
LINC00559-201ENST00000569476 NECTIN1Q15223 517 aa9.46□□□□□ -0.9
LINC00559-201ENST00000569476 CWC25Q9NXE8 425 aaPredicted RBP9.46□□□□□ -0.9
LINC00559-201ENST00000569476 NWD2Q9ULI1 1742 aa9.46□□□□□ -0.9
LINC00559-201ENST00000569476 IL15P40933 162 aaPredicted RBP9.46□□□□□ -0.9
LINC00559-201ENST00000569476 UNC5CLQ8IV45 518 aa9.46□□□□□ -0.9
LINC00559-201ENST00000569476 MYD88Q99836 296 aa9.46□□□□□ -0.9
LINC00559-201ENST00000569476 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
LINC00559-201ENST00000569476 CYP46A1Q9Y6A2 500 aa9.46□□□□□ -0.9
LINC00559-201ENST00000569476 U3KPZ7 1027 aaPredicted RBP9.46□□□□□ -0.9
LINC00559-201ENST00000569476 ZNF609O15014 1411 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 SPRYD3Q8NCJ5 442 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 HELLSQ9NRZ9 838 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 NRAPQ86VF7 1730 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
LINC00559-201ENST00000569476 XRCC6P12956 609 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00559-201ENST00000569476 PDCP20941 246 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 ANP32BQ92688 251 aaKnown RBP9.45□□□□□ -0.9
LINC00559-201ENST00000569476 HAUS7Q99871 368 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 PRDM11Q9NQV5 511 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
LINC00559-201ENST00000569476 TNNI3KQ59H18 835 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 DDX49Q9Y6V7 483 aaKnown RBP9.45□□□□□ -0.9
LINC00559-201ENST00000569476 FPGT-TNNI3KV9GXZ4 949 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 ITGB4P16144 1822 aa9.45□□□□□ -0.9
LINC00559-201ENST00000569476 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
LINC00559-201ENST00000569476 RUFY3Q7L099 469 aa9.44□□□□□ -0.9
LINC00559-201ENST00000569476 ISCA1Q9BUE6 129 aa9.44□□□□□ -0.9
LINC00559-201ENST00000569476 ZDHHC9Q9Y397 364 aa9.44□□□□□ -0.9
LINC00559-201ENST00000569476 PTPN12Q05209 780 aaKnown RBP9.44□□□□□ -0.9
LINC00559-201ENST00000569476 FBXL16Q8N461 479 aa9.44□□□□□ -0.9
LINC00559-201ENST00000569476 PALD1Q9ULE6 856 aa9.44□□□□□ -0.9
LINC00559-201ENST00000569476 COL16A1Q07092 1604 aaPredicted RBP9.44□□□□□ -0.9
LINC00559-201ENST00000569476 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
LINC00559-201ENST00000569476 RBM33Q96EV2 1170 aaKnown RBP9.44□□□□□ -0.9
LINC00559-201ENST00000569476 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
LINC00559-201ENST00000569476 UVSSAQ2YD98 709 aa9.43□□□□□ -0.9
LINC00559-201ENST00000569476 EAF2Q96CJ1 260 aaPredicted RBP9.43□□□□□ -0.9
LINC00559-201ENST00000569476 PDRG1Q9NUG6 133 aa9.43□□□□□ -0.9
LINC00559-201ENST00000569476 AKAP2Q9Y2D5 859 aa9.43□□□□□ -0.9
LINC00559-201ENST00000569476 FAM184AQ8NB25 1140 aa9.43□□□□□ -0.9
LINC00559-201ENST00000569476 FOXO4P98177 505 aa9.43□□□□□ -0.9
LINC00559-201ENST00000569476 DSCC1Q9BVC3 393 aa9.43□□□□□ -0.9
LINC00559-201ENST00000569476 THRAP3Q9Y2W1 955 aaKnown RBP9.43□□□□□ -0.9
LINC00559-201ENST00000569476 PCCAP05165 728 aaPredicted RBP9.42□□□□□ -0.9
LINC00559-201ENST00000569476 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
LINC00559-201ENST00000569476 TOM1L2Q6ZVM7 507 aa9.42□□□□□ -0.9
LINC00559-201ENST00000569476 WDR19Q8NEZ3 1342 aa9.42□□□□□ -0.9
LINC00559-201ENST00000569476 ZSCAN22P10073 491 aaPredicted RBP9.42□□□□□ -0.9
LINC00559-201ENST00000569476 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
LINC00559-201ENST00000569476 CREB3L3Q68CJ9 461 aa9.42□□□□□ -0.9
LINC00559-201ENST00000569476 MCTP1Q6DN14 999 aa9.42□□□□□ -0.9
LINC00559-201ENST00000569476 LLPHQ9BRT6 129 aaKnown RBP9.42□□□□□ -0.9
LINC00559-201ENST00000569476 ZBTB22O15209 634 aa9.42□□□□□ -0.9
LINC00559-201ENST00000569476 LRSAM1Q6UWE0 723 aa9.42□□□□□ -0.9
LINC00559-201ENST00000569476 DDX60Q8IY21 1712 aaKnown RBP9.41□□□□□ -0.9
LINC00559-201ENST00000569476 NMIQ13287 307 aaPredicted RBP9.41□□□□□ -0.9
LINC00559-201ENST00000569476 SMC3Q9UQE7 1217 aa9.41□□□□□ -0.9
LINC00559-201ENST00000569476 USP16Q9Y5T5 823 aa9.41□□□□□ -0.9
LINC00559-201ENST00000569476 ELP1O95163 1332 aa9.41□□□□□ -0.9
LINC00559-201ENST00000569476 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms