RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	RNF181	Q9P0P0	153 aa		31.43	■■■□□ 2.62
GGA2-215	ENST00000569189	UTP14A	Q9BVJ6	771 aa	Known RBP	31.42	■■■□□ 2.62
GGA2-215	ENST00000569189	CRY2	Q49AN0	593 aa		31.41	■■■□□ 2.62
GGA2-215	ENST00000569189	CCDC30	Q5VVM6	783 aa		31.41	■■■□□ 2.62
GGA2-215	ENST00000569189	NLRP10	Q86W26	655 aa		31.41	■■■□□ 2.62
GGA2-215	ENST00000569189	RNF123	Q5XPI4	1314 aa		31.41	■■■□□ 2.62
GGA2-215	ENST00000569189	NFKBIE	O00221	500 aa		31.4	■■■□□ 2.62
GGA2-215	ENST00000569189	TIAM2	Q8IVF5	1701 aa		31.39	■■■□□ 2.62
GGA2-215	ENST00000569189	LAMB2	P55268	1798 aa		31.39	■■■□□ 2.62
GGA2-215	ENST00000569189	FANCI	Q9NVI1	1328 aa		31.39	■■■□□ 2.62
GGA2-215	ENST00000569189	DICER1	Q9UPY3	1922 aa	Known RBP	31.39	■■■□□ 2.62
GGA2-215	ENST00000569189	LMNB1	P20700	586 aa		31.38	■■■□□ 2.61
GGA2-215	ENST00000569189	SOGA3	Q5TF21	947 aa		31.38	■■■□□ 2.61
GGA2-215	ENST00000569189	PHAX	Q9H814	394 aa	Known RBP	31.38	■■■□□ 2.61
GGA2-215	ENST00000569189	GOLGA2	Q08379	1002 aa		31.37	■■■□□ 2.61
GGA2-215	ENST00000569189	TWISTNB	Q3B726	338 aa	Predicted RBP	31.37	■■■□□ 2.61
GGA2-215	ENST00000569189	ALDH1B1	P30837	517 aa		31.36	■■■□□ 2.61
GGA2-215	ENST00000569189	CACNA1F	O60840	1977 aa		31.36	■■■□□ 2.61
GGA2-215	ENST00000569189	PRELP	P51888	382 aa		31.35	■■■□□ 2.61
GGA2-215	ENST00000569189	RPGR	Q92834	1020 aa	Known RBP	31.35	■■■□□ 2.61
GGA2-215	ENST00000569189	SLC10A5	Q5PT55	438 aa		31.34	■■■□□ 2.61
GGA2-215	ENST00000569189	RIC3	Q7Z5B4	369 aa		31.34	■■■□□ 2.61
GGA2-215	ENST00000569189	C7orf43	Q8WVR3	580 aa		31.34	■■■□□ 2.61
GGA2-215	ENST00000569189	ISCA1	Q9BUE6	129 aa		31.34	■■■□□ 2.61
GGA2-215	ENST00000569189	TRMT112	Q9UI30	125 aa	Known RBP	31.34	■■■□□ 2.61
GGA2-215	ENST00000569189	LTBP3	Q9NS15	1303 aa		31.33	■■■□□ 2.61
GGA2-215	ENST00000569189	C3orf67	Q6ZVT6	689 aa		31.33	■■■□□ 2.61
GGA2-215	ENST00000569189	NLRP3	Q96P20	1036 aa		31.33	■■■□□ 2.61
GGA2-215	ENST00000569189	STK31	Q9BXU1	1019 aa		31.33	■■■□□ 2.61
GGA2-215	ENST00000569189	TAOK3	Q9H2K8	898 aa		31.33	■■■□□ 2.61
GGA2-215	ENST00000569189	DDX60	Q8IY21	1712 aa	Known RBP	31.32	■■■□□ 2.61
GGA2-215	ENST00000569189	SH3TC1	Q8TE82	1336 aa		31.32	■■■□□ 2.6
GGA2-215	ENST00000569189	ZC3H4	Q9UPT8	1303 aa	Known RBP	31.32	■■■□□ 2.6
GGA2-215	ENST00000569189	HOXA10	P31260	410 aa	Predicted RBP	31.32	■■■□□ 2.6
GGA2-215	ENST00000569189	CCDC93	Q567U6	631 aa		31.32	■■■□□ 2.6
GGA2-215	ENST00000569189	ATP5J2-PTCD1	G3V325	749 aa		31.31	■■■□□ 2.6
GGA2-215	ENST00000569189	CCER2	I3L3R5	266 aa		31.3	■■■□□ 2.6
GGA2-215	ENST00000569189	DDX58	O95786	925 aa	Known RBP	31.3	■■■□□ 2.6
GGA2-215	ENST00000569189	RBM17	Q96I25	401 aa	Known RBP	31.3	■■■□□ 2.6
GGA2-215	ENST00000569189	SPINK5	Q9NQ38	1064 aa	Predicted RBP	31.3	■■■□□ 2.6
GGA2-215	ENST00000569189	TCERG1	O14776	1098 aa	Known RBP	31.29	■■■□□ 2.6
GGA2-215	ENST00000569189	SYNE4	Q8N205	404 aa		31.29	■■■□□ 2.6
GGA2-215	ENST00000569189	ZNF428	Q96B54	188 aa		31.29	■■■□□ 2.6
GGA2-215	ENST00000569189	HCLS1	P14317	486 aa	Predicted RBP	31.28	■■■□□ 2.6
GGA2-215	ENST00000569189	C1QTNF8	P60827	252 aa		31.28	■■■□□ 2.6
GGA2-215	ENST00000569189	TRIM28	Q13263	835 aa	Known RBP	31.28	■■■□□ 2.6
GGA2-215	ENST00000569189	CRAMP1	Q96RY5	1269 aa		31.28	■■■□□ 2.6
GGA2-215	ENST00000569189	MYH16	Q9H6N6	1097 aa		31.28	■■■□□ 2.6
GGA2-215	ENST00000569189	EXOSC9	Q06265	439 aa	Known RBP	31.27	■■■□□ 2.6
GGA2-215	ENST00000569189	OLFM4	Q6UX06	510 aa		31.27	■■■□□ 2.6
GGA2-215	ENST00000569189	ZNF521	Q96K83	1311 aa		31.26	■■■□□ 2.6
GGA2-215	ENST00000569189	KDM2B	Q8NHM5	1336 aa		31.25	■■■□□ 2.59
GGA2-215	ENST00000569189	RTKN2	Q8IZC4	609 aa		31.25	■■■□□ 2.59
GGA2-215	ENST00000569189	MYD88	Q99836	296 aa		31.25	■■■□□ 2.59
GGA2-215	ENST00000569189	KIF3C	O14782	793 aa		31.24	■■■□□ 2.59
GGA2-215	ENST00000569189	FAM89A	Q96GI7	184 aa		31.24	■■■□□ 2.59
GGA2-215	ENST00000569189	SNED1	Q8TER0	1413 aa		31.24	■■■□□ 2.59
GGA2-215	ENST00000569189	VAMP4	O75379	141 aa		31.23	■■■□□ 2.59
GGA2-215	ENST00000569189	SLC4A2	P04920	1241 aa		31.23	■■■□□ 2.59
GGA2-215	ENST00000569189	FKBP4	Q02790	459 aa	Known RBP eCLIP	31.23	■■■□□ 2.59
GGA2-215	ENST00000569189	METTL22	Q9BUU2	404 aa	Predicted RBP	31.23	■■■□□ 2.59
GGA2-215	ENST00000569189	NMRK2	Q9NPI5	230 aa		31.23	■■■□□ 2.59
GGA2-215	ENST00000569189	TAF1	P21675	1872 aa		31.23	■■■□□ 2.59
GGA2-215	ENST00000569189	PPEF1	O14829	653 aa	Predicted RBP	31.22	■■■□□ 2.59
GGA2-215	ENST00000569189	KSR2	Q6VAB6	950 aa		31.22	■■■□□ 2.59
GGA2-215	ENST00000569189	MAP3K2	Q9Y2U5	619 aa		31.22	■■■□□ 2.59
GGA2-215	ENST00000569189	ABCC4	O15439	1325 aa		31.22	■■■□□ 2.59
GGA2-215	ENST00000569189	CC2D2B	Q6DHV5	1058 aa		31.21	■■■□□ 2.59
GGA2-215	ENST00000569189	PI4KAP2	A4QPH2	592 aa		31.2	■■■□□ 2.59
GGA2-215	ENST00000569189	G2E3	Q7L622	706 aa		31.2	■■■□□ 2.59
GGA2-215	ENST00000569189	PI4KAP1	Q8N8J0	262 aa		31.2	■■■□□ 2.59
GGA2-215	ENST00000569189	CCDC191	Q8NCU4	936 aa		31.2	■■■□□ 2.59
GGA2-215	ENST00000569189	RTL5	Q5HYW3	569 aa	Predicted RBP	31.19	■■■□□ 2.58
GGA2-215	ENST00000569189	DDX46	Q7L014	1031 aa	Known RBP	31.18	■■■□□ 2.58
GGA2-215	ENST00000569189	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.18	■■■□□ 2.58
GGA2-215	ENST00000569189	ZNF277	Q9NRM2	450 aa	Predicted RBP	31.18	■■■□□ 2.58
GGA2-215	ENST00000569189	GLTPD2	A6NH11	291 aa		31.17	■■■□□ 2.58
GGA2-215	ENST00000569189	IRS4	O14654	1257 aa	Predicted RBP	31.17	■■■□□ 2.58
GGA2-215	ENST00000569189	FLII	Q13045	1269 aa		31.17	■■■□□ 2.58
GGA2-215	ENST00000569189	PSMD1	Q99460	953 aa		31.17	■■■□□ 2.58
GGA2-215	ENST00000569189	CWC25	Q9NXE8	425 aa	Predicted RBP	31.17	■■■□□ 2.58
GGA2-215	ENST00000569189	GRIPAP1	Q4V328	841 aa		31.16	■■■□□ 2.58
GGA2-215	ENST00000569189	NEXN	Q0ZGT2	675 aa		31.15	■■■□□ 2.58
GGA2-215	ENST00000569189	SLC51A	Q86UW1	340 aa		31.15	■■■□□ 2.58
GGA2-215	ENST00000569189	PCCA	P05165	728 aa	Predicted RBP	31.14	■■■□□ 2.58
GGA2-215	ENST00000569189	GRAP	Q13588	217 aa		31.14	■■■□□ 2.58
GGA2-215	ENST00000569189	SF3B3	Q15393	1217 aa	Known RBP	31.14	■■■□□ 2.58
GGA2-215	ENST00000569189	GRAPL	Q8TC17	118 aa	Predicted RBP	31.14	■■■□□ 2.58
GGA2-215	ENST00000569189	ATP6V0A2	Q9Y487	856 aa		31.14	■■■□□ 2.58
GGA2-215	ENST00000569189	WDR90	Q96KV7	1748 aa		31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	BBOX1	O75936	387 aa		31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	IGKV5-2	P06315	115 aa		31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	HSP90B1	P14625	803 aa	Known RBP	31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	FKBP5	Q13451	457 aa	Predicted RBP	31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	DIEXF	Q68CQ4	756 aa	Known RBP	31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	DPY19L2	Q6NUT2	758 aa		31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	TMX4	Q9H1E5	349 aa	Predicted RBP	31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	RRAGC	Q9HB90	399 aa		31.13	■■■□□ 2.57
GGA2-215	ENST00000569189	MYH3	P11055	1940 aa		31.12	■■■□□ 2.57
GGA2-215	ENST00000569189	IARS	P41252	1262 aa	Known RBP	31.12	■■■□□ 2.57

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