RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
SCAMP2-210ENST00000569124 IBTKQ9P2D0 1353 aaPredicted RBP20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 KIF6Q6ZMV9 814 aa20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 PNMA8AQ86V59 439 aaPredicted RBP20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 SYNE4Q8N205 404 aa20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 MIS18AQ9NYP9 233 aa20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 MAP3K15Q6ZN16 1313 aa20.22■□□□□ 0.83
SCAMP2-210ENST00000569124 THSD7BQ9C0I4 1608 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 FZD9O00144 591 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 CRY2Q49AN0 593 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 JDP2Q8WYK2 163 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 RPGRQ92834 1020 aaKnown RBP20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 AIDAQ96BJ3 306 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 PSMD1Q99460 953 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 COL4A5P29400 1685 aa20.21■□□□□ 0.83
SCAMP2-210ENST00000569124 ERVV-1B6SEH8 477 aa20.2■□□□□ 0.82
SCAMP2-210ENST00000569124 FOXN1O15353 648 aa20.2■□□□□ 0.82
SCAMP2-210ENST00000569124 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.82
SCAMP2-210ENST00000569124 GPC2Q8N158 579 aa20.2■□□□□ 0.82
SCAMP2-210ENST00000569124 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
SCAMP2-210ENST00000569124 CC2D2BQ6DHV5 1058 aa20.19■□□□□ 0.82
SCAMP2-210ENST00000569124 TAF1P21675 1872 aa20.19■□□□□ 0.82
SCAMP2-210ENST00000569124 VEGFBP49765 207 aa20.18■□□□□ 0.82
SCAMP2-210ENST00000569124 EIF6P56537 245 aaKnown RBP20.18■□□□□ 0.82
SCAMP2-210ENST00000569124 RRP7AQ9Y3A4 280 aaKnown RBP20.18■□□□□ 0.82
SCAMP2-210ENST00000569124 MYL6BP14649 208 aa20.17■□□□□ 0.82
SCAMP2-210ENST00000569124 GPTP24298 496 aa20.17■□□□□ 0.82
SCAMP2-210ENST00000569124 LMOD1P29536 600 aaPredicted RBP20.17■□□□□ 0.82
SCAMP2-210ENST00000569124 PLEKHF1Q96S99 279 aa20.17■□□□□ 0.82
SCAMP2-210ENST00000569124 ZBTB3Q9H5J0 574 aa20.17■□□□□ 0.82
SCAMP2-210ENST00000569124 CTCFP49711 727 aaPredicted RBP20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 GRIPAP1Q4V328 841 aa20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 TTLL7Q6ZT98 887 aa20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 CNTROBQ8N137 903 aa20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 GJA3Q9Y6H8 435 aa20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 UBN2Q6ZU65 1347 aa20.16■□□□□ 0.82
SCAMP2-210ENST00000569124 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
SCAMP2-210ENST00000569124 ERBB4Q15303 1308 aa20.14■□□□□ 0.81
SCAMP2-210ENST00000569124 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
SCAMP2-210ENST00000569124 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
SCAMP2-210ENST00000569124 NFE2L2Q16236 605 aa20.14■□□□□ 0.81
SCAMP2-210ENST00000569124 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
SCAMP2-210ENST00000569124 RBM17Q96I25 401 aaKnown RBP20.14■□□□□ 0.81
SCAMP2-210ENST00000569124 RASSF10A6NK89 507 aa20.13■□□□□ 0.81
SCAMP2-210ENST00000569124 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
SCAMP2-210ENST00000569124 ABT1Q9ULW3 272 aaKnown RBP20.13■□□□□ 0.81
SCAMP2-210ENST00000569124 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
SCAMP2-210ENST00000569124 APAF1O14727 1248 aa20.12■□□□□ 0.81
SCAMP2-210ENST00000569124 DEFB115Q30KQ5 88 aa20.12■□□□□ 0.81
SCAMP2-210ENST00000569124 SUSD4Q5VX71 490 aa20.12■□□□□ 0.81
SCAMP2-210ENST00000569124 GIGYF2Q6Y7W6 1299 aaKnown RBP20.12■□□□□ 0.81
SCAMP2-210ENST00000569124 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
SCAMP2-210ENST00000569124 LRRC37AA6NMS7 1700 aa20.12■□□□□ 0.81
SCAMP2-210ENST00000569124 NTSR2O95665 410 aa20.11■□□□□ 0.81
SCAMP2-210ENST00000569124 PPP1R42Q7Z4L9 355 aa20.11■□□□□ 0.81
SCAMP2-210ENST00000569124 NIM1KQ8IY84 436 aa20.11■□□□□ 0.81
SCAMP2-210ENST00000569124 ZNF34Q8IZ26 560 aa20.11■□□□□ 0.81
SCAMP2-210ENST00000569124 TMX4Q9H1E5 349 aaPredicted RBP20.11■□□□□ 0.81
SCAMP2-210ENST00000569124 WBP1LQ9NX94 342 aa20.11■□□□□ 0.81
SCAMP2-210ENST00000569124 POLR2AP24928 1970 aaKnown RBP20.11■□□□□ 0.81
SCAMP2-210ENST00000569124 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
SCAMP2-210ENST00000569124 HNRNPUQ00839 825 aaKnown RBP eCLIP20.1■□□□□ 0.81
SCAMP2-210ENST00000569124 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
SCAMP2-210ENST00000569124 WDR33Q9C0J8 1336 aaKnown RBP20.09■□□□□ 0.81
SCAMP2-210ENST00000569124 TMPOP42166 694 aaKnown RBP20.09■□□□□ 0.81
SCAMP2-210ENST00000569124 SCNN1DP51172 638 aa20.09■□□□□ 0.81
SCAMP2-210ENST00000569124 LMOD3Q0VAK6 560 aa20.09■□□□□ 0.81
SCAMP2-210ENST00000569124 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
SCAMP2-210ENST00000569124 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
SCAMP2-210ENST00000569124 TSPYL4Q9UJ04 414 aa20.09■□□□□ 0.81
SCAMP2-210ENST00000569124 PPIP5K2O43314 1243 aa20.08■□□□□ 0.81
SCAMP2-210ENST00000569124 LBX1P52954 281 aa20.08■□□□□ 0.81
SCAMP2-210ENST00000569124 RIPK4P57078 832 aa20.08■□□□□ 0.81
SCAMP2-210ENST00000569124 MAP2K1Q02750 393 aaPredicted RBP20.08■□□□□ 0.81
SCAMP2-210ENST00000569124 NLRP3Q96P20 1036 aa20.08■□□□□ 0.81
SCAMP2-210ENST00000569124 EPS15P42566 896 aa20.07■□□□□ 0.8
SCAMP2-210ENST00000569124 C3orf67Q6ZVT6 689 aa20.07■□□□□ 0.8
SCAMP2-210ENST00000569124 PAXIP1Q6ZW49 1069 aaPredicted RBP20.07■□□□□ 0.8
SCAMP2-210ENST00000569124 USP50Q70EL3 339 aaPredicted RBP20.07■□□□□ 0.8
SCAMP2-210ENST00000569124 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
SCAMP2-210ENST00000569124 CASP8AP2Q9UKL3 1982 aa20.06■□□□□ 0.8
SCAMP2-210ENST00000569124 AOC3Q16853 763 aa20.06■□□□□ 0.8
SCAMP2-210ENST00000569124 SLC51AQ86UW1 340 aa20.06■□□□□ 0.8
SCAMP2-210ENST00000569124 UTP14AQ9BVJ6 771 aaKnown RBP20.06■□□□□ 0.8
SCAMP2-210ENST00000569124 ABCC4O15439 1325 aa20.05■□□□□ 0.8
SCAMP2-210ENST00000569124 HSPA8P11142 646 aaKnown RBP20.05■□□□□ 0.8
SCAMP2-210ENST00000569124 ECE1P42892 770 aa20.05■□□□□ 0.8
SCAMP2-210ENST00000569124 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
SCAMP2-210ENST00000569124 SUPT20HQ8NEM7 779 aa20.05■□□□□ 0.8
SCAMP2-210ENST00000569124 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
SCAMP2-210ENST00000569124 ATP6V0A2Q9Y487 856 aa20.05■□□□□ 0.8
SCAMP2-210ENST00000569124 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
SCAMP2-210ENST00000569124 VPS33BQ9H267 617 aa20.04■□□□□ 0.8
SCAMP2-210ENST00000569124 CAPNS2Q96L46 248 aa20.03■□□□□ 0.8
SCAMP2-210ENST00000569124 BEGAINQ9BUH8 593 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms