RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 HSPA8P11142 646 aaKnown RBP19.81■□□□□ 0.76
USB1-214ENST00000568848 EPS15P42566 896 aa19.81■□□□□ 0.76
USB1-214ENST00000568848 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
USB1-214ENST00000568848 RTKN2Q8IZC4 609 aa19.81■□□□□ 0.76
USB1-214ENST00000568848 ABT1Q9ULW3 272 aaKnown RBP19.81■□□□□ 0.76
USB1-214ENST00000568848 SUSD4Q5VX71 490 aa19.8■□□□□ 0.76
USB1-214ENST00000568848 TSKSQ9UJT2 592 aa19.8■□□□□ 0.76
USB1-214ENST00000568848 NUDCQ9Y266 331 aa19.8■□□□□ 0.76
USB1-214ENST00000568848 SCNN1DP51172 638 aa19.79■□□□□ 0.76
USB1-214ENST00000568848 TAF7Q15545 349 aaPredicted RBP19.79■□□□□ 0.76
USB1-214ENST00000568848 DEFB115Q30KQ5 88 aa19.79■□□□□ 0.76
USB1-214ENST00000568848 CRY2Q49AN0 593 aa19.79■□□□□ 0.76
USB1-214ENST00000568848 PAXIP1Q6ZW49 1069 aaPredicted RBP19.79■□□□□ 0.76
USB1-214ENST00000568848 PRDM10Q9NQV6 1147 aa19.79■□□□□ 0.76
USB1-214ENST00000568848 WDR33Q9C0J8 1336 aaKnown RBP19.78■□□□□ 0.76
USB1-214ENST00000568848 RASSF10A6NK89 507 aa19.78■□□□□ 0.76
USB1-214ENST00000568848 ANXA1P04083 346 aa19.78■□□□□ 0.76
USB1-214ENST00000568848 GPC2Q8N158 579 aa19.78■□□□□ 0.76
USB1-214ENST00000568848 MAP3K15Q6ZN16 1313 aa19.77■□□□□ 0.76
USB1-214ENST00000568848 ALDH1B1P30837 517 aa19.77■□□□□ 0.76
USB1-214ENST00000568848 CYP4F22Q6NT55 531 aa19.77■□□□□ 0.76
USB1-214ENST00000568848 DDX21Q9NR30 783 aaKnown RBP eCLIP19.77■□□□□ 0.76
USB1-214ENST00000568848 EIF4A1P60842 406 aaKnown RBP19.76■□□□□ 0.75
USB1-214ENST00000568848 LARGE2Q8N3Y3 721 aa19.76■□□□□ 0.75
USB1-214ENST00000568848 JDP2Q8WYK2 163 aa19.76■□□□□ 0.75
USB1-214ENST00000568848 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
USB1-214ENST00000568848 PSMD1Q99460 953 aa19.76■□□□□ 0.75
USB1-214ENST00000568848 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
USB1-214ENST00000568848 EIF6P56537 245 aaKnown RBP19.75■□□□□ 0.75
USB1-214ENST00000568848 AOC3Q16853 763 aa19.75■□□□□ 0.75
USB1-214ENST00000568848 PNMA8AQ86V59 439 aaPredicted RBP19.75■□□□□ 0.75
USB1-214ENST00000568848 AOC2O75106 756 aa19.74■□□□□ 0.75
USB1-214ENST00000568848 NTSR2O95665 410 aa19.74■□□□□ 0.75
USB1-214ENST00000568848 PROSER3Q2NL68 480 aa19.74■□□□□ 0.75
USB1-214ENST00000568848 CST9Q5W186 159 aa19.74■□□□□ 0.75
USB1-214ENST00000568848 KIF6Q6ZMV9 814 aa19.74■□□□□ 0.75
USB1-214ENST00000568848 ABHD8Q96I13 439 aa19.74■□□□□ 0.75
USB1-214ENST00000568848 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
USB1-214ENST00000568848 DLK2Q6UY11 383 aa19.73■□□□□ 0.75
USB1-214ENST00000568848 CAPNS2Q96L46 248 aa19.73■□□□□ 0.75
USB1-214ENST00000568848 TAF1P21675 1872 aa19.73■□□□□ 0.75
USB1-214ENST00000568848 HTATSF1O43719 755 aaKnown RBP19.72■□□□□ 0.75
USB1-214ENST00000568848 LMOD1P29536 600 aaPredicted RBP19.72■□□□□ 0.75
USB1-214ENST00000568848 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
USB1-214ENST00000568848 RIC1Q4ADV7 1423 aa19.72■□□□□ 0.75
USB1-214ENST00000568848 NECTIN2Q92692 538 aa19.72■□□□□ 0.75
USB1-214ENST00000568848 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
USB1-214ENST00000568848 ERVV-1B6SEH8 477 aa19.71■□□□□ 0.75
USB1-214ENST00000568848 PPIP5K2O43314 1243 aa19.71■□□□□ 0.75
USB1-214ENST00000568848 HOXA10P31260 410 aaPredicted RBP19.71■□□□□ 0.75
USB1-214ENST00000568848 ZNF34Q8IZ26 560 aa19.71■□□□□ 0.75
USB1-214ENST00000568848 THSD7BQ9C0I4 1608 aa19.71■□□□□ 0.75
USB1-214ENST00000568848 TRPM7Q96QT4 1865 aa19.71■□□□□ 0.75
USB1-214ENST00000568848 LAMB2P55268 1798 aa19.7■□□□□ 0.74
USB1-214ENST00000568848 RBM17Q96I25 401 aaKnown RBP19.7■□□□□ 0.74
USB1-214ENST00000568848 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
USB1-214ENST00000568848 GLIS2Q9BZE0 524 aaPredicted RBP19.7■□□□□ 0.74
USB1-214ENST00000568848 RGL2O15211 777 aa19.69■□□□□ 0.74
USB1-214ENST00000568848 EIF2S2P20042 333 aaKnown RBP19.69■□□□□ 0.74
USB1-214ENST00000568848 NIM1KQ8IY84 436 aa19.69■□□□□ 0.74
USB1-214ENST00000568848 ABCC4O15439 1325 aa19.69■□□□□ 0.74
USB1-214ENST00000568848 HCLS1P14317 486 aaPredicted RBP19.68■□□□□ 0.74
USB1-214ENST00000568848 GMPSP49915 693 aaPredicted RBP19.68■□□□□ 0.74
USB1-214ENST00000568848 PDIA6Q15084 440 aa19.68■□□□□ 0.74
USB1-214ENST00000568848 LRP10Q7Z4F1 713 aa19.68■□□□□ 0.74
USB1-214ENST00000568848 GPR101Q96P66 508 aaPredicted RBP19.68■□□□□ 0.74
USB1-214ENST00000568848 CRAMP1Q96RY5 1269 aa19.68■□□□□ 0.74
USB1-214ENST00000568848 COL4A1P02462 1669 aa19.68■□□□□ 0.74
USB1-214ENST00000568848 CXCL9Q07325 125 aa19.67■□□□□ 0.74
USB1-214ENST00000568848 NFE2L2Q16236 605 aa19.67■□□□□ 0.74
USB1-214ENST00000568848 ZNF408Q9H9D4 720 aa19.67■□□□□ 0.74
USB1-214ENST00000568848 GPRC5DQ9NZD1 345 aa19.67■□□□□ 0.74
USB1-214ENST00000568848 CCDC85CA6NKD9 419 aa19.66■□□□□ 0.74
USB1-214ENST00000568848 RAD17O75943 681 aa19.66■□□□□ 0.74
USB1-214ENST00000568848 MAP2K1Q02750 393 aaPredicted RBP19.66■□□□□ 0.74
USB1-214ENST00000568848 KRT24Q2M2I5 525 aa19.66■□□□□ 0.74
USB1-214ENST00000568848 GIGYF2Q6Y7W6 1299 aaKnown RBP19.66■□□□□ 0.74
USB1-214ENST00000568848 TRPM4Q8TD43 1214 aa19.66■□□□□ 0.74
USB1-214ENST00000568848 IBTKQ9P2D0 1353 aaPredicted RBP19.66■□□□□ 0.74
USB1-214ENST00000568848 CELF2O95319 508 aaKnown RBP19.65■□□□□ 0.74
USB1-214ENST00000568848 HIRAP54198 1017 aaPredicted RBP19.65■□□□□ 0.74
USB1-214ENST00000568848 AIMP1Q12904 312 aaKnown RBP19.65■□□□□ 0.74
USB1-214ENST00000568848 CC2D2BQ6DHV5 1058 aa19.65■□□□□ 0.74
USB1-214ENST00000568848 ZIC5Q96T25 663 aa19.65■□□□□ 0.74
USB1-214ENST00000568848 TSPYL4Q9UJ04 414 aa19.65■□□□□ 0.74
USB1-214ENST00000568848 TLL2Q9Y6L7 1015 aa19.65■□□□□ 0.74
USB1-214ENST00000568848 CASP8AP2Q9UKL3 1982 aa19.64■□□□□ 0.74
USB1-214ENST00000568848 USP50Q70EL3 339 aaPredicted RBP19.64■□□□□ 0.73
USB1-214ENST00000568848 PNISRQ8TF01 805 aaKnown RBP19.64■□□□□ 0.73
USB1-214ENST00000568848 ATP6V0A2Q9Y487 856 aa19.64■□□□□ 0.73
USB1-214ENST00000568848 DUOX1Q9NRD9 1551 aa19.63■□□□□ 0.73
USB1-214ENST00000568848 UTP14AQ9BVJ6 771 aaKnown RBP19.63■□□□□ 0.73
USB1-214ENST00000568848 ANKRD36CQ5JPF3 1778 aa19.62■□□□□ 0.73
USB1-214ENST00000568848 YDJCA8MPS7 323 aa19.62■□□□□ 0.73
USB1-214ENST00000568848 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
USB1-214ENST00000568848 ADARB2Q9NS39 739 aaKnown RBP19.62■□□□□ 0.73
USB1-214ENST00000568848 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
USB1-214ENST00000568848 XAGE3Q8WTP9 111 aa19.61■□□□□ 0.73
USB1-214ENST00000568848 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
USB1-214ENST00000568848 ZBTB12Q9Y330 459 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms