RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 SCNN1DP51172 638 aa15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 NUTM1Q86Y26 1132 aa15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 LARGE2Q8N3Y3 721 aa15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 BEGAINQ9BUH8 593 aa15.73■□□□□ 0.11
GTF3C1-209ENST00000568569 ERVV-1B6SEH8 477 aa15.72■□□□□ 0.11
GTF3C1-209ENST00000568569 TAF7Q15545 349 aaPredicted RBP15.72■□□□□ 0.11
GTF3C1-209ENST00000568569 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
GTF3C1-209ENST00000568569 CAPNS2Q96L46 248 aa15.72■□□□□ 0.11
GTF3C1-209ENST00000568569 SLC34A2O95436 690 aa15.71■□□□□ 0.11
GTF3C1-209ENST00000568569 HOXA10P31260 410 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-209ENST00000568569 EPS15P42566 896 aa15.71■□□□□ 0.11
GTF3C1-209ENST00000568569 USP50Q70EL3 339 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-209ENST00000568569 GPR101Q96P66 508 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-209ENST00000568569 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-209ENST00000568569 MAP3K15Q6ZN16 1313 aa15.7■□□□□ 0.1
GTF3C1-209ENST00000568569 COL4A5P29400 1685 aa15.7■□□□□ 0.1
GTF3C1-209ENST00000568569 RIC1Q4ADV7 1423 aa15.7■□□□□ 0.1
GTF3C1-209ENST00000568569 KIF6Q6ZMV9 814 aa15.7■□□□□ 0.1
GTF3C1-209ENST00000568569 NGEFQ8N5V2 710 aa15.7■□□□□ 0.1
GTF3C1-209ENST00000568569 PPEF1O14829 653 aaPredicted RBP15.69■□□□□ 0.1
GTF3C1-209ENST00000568569 FMR1Q06787 632 aaKnown RBP eCLIP15.69■□□□□ 0.1
GTF3C1-209ENST00000568569 GRM1Q13255 1194 aa15.69■□□□□ 0.1
GTF3C1-209ENST00000568569 CYP4F22Q6NT55 531 aa15.69■□□□□ 0.1
GTF3C1-209ENST00000568569 NIM1KQ8IY84 436 aa15.69■□□□□ 0.1
GTF3C1-209ENST00000568569 RBM17Q96I25 401 aaKnown RBP15.69■□□□□ 0.1
GTF3C1-209ENST00000568569 CRAMP1Q96RY5 1269 aa15.69■□□□□ 0.1
GTF3C1-209ENST00000568569 THSD7BQ9C0I4 1608 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 TRAF5O00463 557 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 GPTP24298 496 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 CST9Q5W186 159 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 PNISRQ8TF01 805 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 TMX4Q9H1E5 349 aaPredicted RBP15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 TLL2Q9Y6L7 1015 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
GTF3C1-209ENST00000568569 PPIP5K2O43314 1243 aa15.67■□□□□ 0.1
GTF3C1-209ENST00000568569 MAP2K2P36507 400 aa15.67■□□□□ 0.1
GTF3C1-209ENST00000568569 TTLL7Q6ZT98 887 aa15.67■□□□□ 0.1
GTF3C1-209ENST00000568569 ADARB2Q9NS39 739 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-209ENST00000568569 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 MLLT1Q03111 559 aaPredicted RBP15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 SUSD4Q5VX71 490 aa15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 VPS33BQ9H267 617 aa15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 ZBTB3Q9H5J0 574 aa15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 GPRC5DQ9NZD1 345 aa15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 RRP7AQ9Y3A4 280 aaKnown RBP15.66■□□□□ 0.1
GTF3C1-209ENST00000568569 TCERG1O14776 1098 aaKnown RBP15.65■□□□□ 0.1
GTF3C1-209ENST00000568569 CA12O43570 354 aa15.65■□□□□ 0.1
GTF3C1-209ENST00000568569 NTSR2O95665 410 aa15.65■□□□□ 0.1
GTF3C1-209ENST00000568569 NEFMP07197 916 aa15.65■□□□□ 0.1
GTF3C1-209ENST00000568569 AOC3Q16853 763 aa15.65■□□□□ 0.1
GTF3C1-209ENST00000568569 SLC51AQ86UW1 340 aa15.65■□□□□ 0.1
GTF3C1-209ENST00000568569 LAMB4A4D0S4 1761 aa15.64■□□□□ 0.1
GTF3C1-209ENST00000568569 CELF2O95319 508 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 MYL6BP14649 208 aa15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 RGS19P49795 217 aa15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 EIF4A1P60842 406 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 SAPCD2Q86UD0 394 aa15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 ZNF34Q8IZ26 560 aa15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 ATP6V0A2Q9Y487 856 aa15.64■□□□□ 0.09
GTF3C1-209ENST00000568569 AOC2O75106 756 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 PARP10Q53GL7 1025 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 C3orf67Q6ZVT6 689 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 SUPT20HQ8NEM7 779 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 HHIPL1Q96JK4 782 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 NLRP3Q96P20 1036 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 TSKSQ9UJT2 592 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 ZNRF3Q9ULT6 936 aa15.63■□□□□ 0.09
GTF3C1-209ENST00000568569 CXCL9Q07325 125 aa15.62■□□□□ 0.09
GTF3C1-209ENST00000568569 RTFDC1Q9BY42 306 aaPredicted RBP15.62■□□□□ 0.09
GTF3C1-209ENST00000568569 ERBB4Q15303 1308 aa15.62■□□□□ 0.09
GTF3C1-209ENST00000568569 CDHR2Q9BYE9 1310 aa15.62■□□□□ 0.09
GTF3C1-209ENST00000568569 GMPSP49915 693 aaPredicted RBP15.61■□□□□ 0.09
GTF3C1-209ENST00000568569 BRPF1P55201 1214 aaPredicted RBP15.61■□□□□ 0.09
GTF3C1-209ENST00000568569 ZC3H15Q8WU90 426 aaKnown RBP15.61■□□□□ 0.09
GTF3C1-209ENST00000568569 GLIS2Q9BZE0 524 aaPredicted RBP15.61■□□□□ 0.09
GTF3C1-209ENST00000568569 CIAPIN1Q6FI81 312 aa15.6■□□□□ 0.09
GTF3C1-209ENST00000568569 DPP8Q6V1X1 898 aaPredicted RBP15.6■□□□□ 0.09
GTF3C1-209ENST00000568569 UTP14AQ9BVJ6 771 aaKnown RBP15.6■□□□□ 0.09
GTF3C1-209ENST00000568569 PGAP2Q9UHJ9 254 aa15.6■□□□□ 0.09
GTF3C1-209ENST00000568569 ABCC4O15439 1325 aa15.6■□□□□ 0.09
GTF3C1-209ENST00000568569 SLC10A5Q5PT55 438 aa15.59■□□□□ 0.09
GTF3C1-209ENST00000568569 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
GTF3C1-209ENST00000568569 MCOLN1Q9GZU1 580 aa15.59■□□□□ 0.09
GTF3C1-209ENST00000568569 NUP98P52948 1817 aa15.59■□□□□ 0.09
GTF3C1-209ENST00000568569 TRPM7Q96QT4 1865 aa15.59■□□□□ 0.09
GTF3C1-209ENST00000568569 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 BBOX1O75936 387 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 KIAA2012Q0VF49 1180 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 TNIP1Q15025 636 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 CDC37L1Q7L3B6 337 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 SP8Q8IXZ3 490 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms