RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	PTGER2	P43116	358 aa		18.83	■□□□□ 0.6
KLHDC4-223	ENST00000568499	SUSD4	Q5VX71	490 aa		18.83	■□□□□ 0.6
KLHDC4-223	ENST00000568499	DZIP1L	Q8IYY4	767 aa	Known RBP	18.83	■□□□□ 0.6
KLHDC4-223	ENST00000568499	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.82	■□□□□ 0.6
KLHDC4-223	ENST00000568499	IGKV5-2	P06315	115 aa		18.82	■□□□□ 0.6
KLHDC4-223	ENST00000568499	CWF19L2	Q2TBE0	894 aa	Known RBP	18.82	■□□□□ 0.6
KLHDC4-223	ENST00000568499	SGIP1	Q9BQI5	828 aa		18.82	■□□□□ 0.6
KLHDC4-223	ENST00000568499	PXDNL	A1KZ92	1463 aa		18.82	■□□□□ 0.6
KLHDC4-223	ENST00000568499	NUP98	P52948	1817 aa		18.81	■□□□□ 0.6
KLHDC4-223	ENST00000568499	ARFGEF2	Q9Y6D5	1785 aa		18.81	■□□□□ 0.6
KLHDC4-223	ENST00000568499	SH3TC1	Q8TE82	1336 aa		18.81	■□□□□ 0.6
KLHDC4-223	ENST00000568499	GCKR	Q14397	625 aa		18.81	■□□□□ 0.6
KLHDC4-223	ENST00000568499	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.81	■□□□□ 0.6
KLHDC4-223	ENST00000568499	CLUAP1	Q96AJ1	413 aa		18.81	■□□□□ 0.6
KLHDC4-223	ENST00000568499	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.81	■□□□□ 0.6
KLHDC4-223	ENST00000568499	ABCC4	O15439	1325 aa		18.8	■□□□□ 0.6
KLHDC4-223	ENST00000568499	NTSR2	O95665	410 aa		18.8	■□□□□ 0.6
KLHDC4-223	ENST00000568499	HDAC5	Q9UQL6	1122 aa		18.8	■□□□□ 0.6
KLHDC4-223	ENST00000568499	PCCA	P05165	728 aa	Predicted RBP	18.79	■□□□□ 0.6
KLHDC4-223	ENST00000568499	INTS3	Q68E01	1043 aa	Known RBP	18.79	■□□□□ 0.6
KLHDC4-223	ENST00000568499	PRR5L	Q6MZQ0	368 aa		18.79	■□□□□ 0.6
KLHDC4-223	ENST00000568499	PDZRN3	Q9UPQ7	1066 aa		18.79	■□□□□ 0.6
KLHDC4-223	ENST00000568499	PDE6B	P35913	854 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	RRP1	P56182	461 aa	Known RBP	18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	PDE3A	Q14432	1141 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	ERFE	Q4G0M1	354 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	NUTM1	Q86Y26	1132 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	KLHL34	Q8N239	644 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	FAM89A	Q96GI7	184 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	BRIP1	Q9BX63	1249 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	CHMP4B	Q9H444	224 aa	Known RBP	18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	CD2AP	Q9Y5K6	639 aa		18.78	■□□□□ 0.6
KLHDC4-223	ENST00000568499	GRM8	O00222	908 aa		18.77	■□□□□ 0.6
KLHDC4-223	ENST00000568499	PLIN1	O60240	522 aa		18.77	■□□□□ 0.6
KLHDC4-223	ENST00000568499	ANKRD36C	Q5JPF3	1778 aa		18.77	■□□□□ 0.6
KLHDC4-223	ENST00000568499		H7C1W4	665 aa		18.76	■□□□□ 0.59
KLHDC4-223	ENST00000568499	IRS4	O14654	1257 aa	Predicted RBP	18.76	■□□□□ 0.59
KLHDC4-223	ENST00000568499	SLC10A5	Q5PT55	438 aa		18.76	■□□□□ 0.59
KLHDC4-223	ENST00000568499	UBE3B	Q7Z3V4	1068 aa		18.76	■□□□□ 0.59
KLHDC4-223	ENST00000568499	ITPRIP	Q8IWB1	547 aa		18.76	■□□□□ 0.59
KLHDC4-223	ENST00000568499	NLRP3	Q96P20	1036 aa		18.76	■□□□□ 0.59
KLHDC4-223	ENST00000568499	COL24A1	Q17RW2	1714 aa		18.76	■□□□□ 0.59
KLHDC4-223	ENST00000568499	RTL5	Q5HYW3	569 aa	Predicted RBP	18.75	■□□□□ 0.59
KLHDC4-223	ENST00000568499	TMEM57	Q8N5G2	664 aa		18.75	■□□□□ 0.59
KLHDC4-223	ENST00000568499	CDHR2	Q9BYE9	1310 aa		18.74	■□□□□ 0.59
KLHDC4-223	ENST00000568499	GNAI3	P08754	354 aa		18.74	■□□□□ 0.59
KLHDC4-223	ENST00000568499	TGFB2	P61812	414 aa		18.74	■□□□□ 0.59
KLHDC4-223	ENST00000568499	PANK1	Q8TE04	598 aa		18.74	■□□□□ 0.59
KLHDC4-223	ENST00000568499	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.74	■□□□□ 0.59
KLHDC4-223	ENST00000568499		H0YIN7	160 aa		18.73	■□□□□ 0.59
KLHDC4-223	ENST00000568499	PDE8A	O60658	829 aa		18.73	■□□□□ 0.59
KLHDC4-223	ENST00000568499	UBTFL1	P0CB47	393 aa	Predicted RBP	18.73	■□□□□ 0.59
KLHDC4-223	ENST00000568499	HCLS1	P14317	486 aa	Predicted RBP	18.73	■□□□□ 0.59
KLHDC4-223	ENST00000568499	CCDC24	Q8N4L8	307 aa		18.73	■□□□□ 0.59
KLHDC4-223	ENST00000568499	TNN	Q9UQP3	1299 aa		18.73	■□□□□ 0.59
KLHDC4-223	ENST00000568499	C10orf71	Q711Q0	1435 aa		18.73	■□□□□ 0.59
KLHDC4-223	ENST00000568499	JARID2	Q92833	1246 aa	Predicted RBP	18.72	■□□□□ 0.59
KLHDC4-223	ENST00000568499	USP44	Q9H0E7	712 aa		18.72	■□□□□ 0.59
KLHDC4-223	ENST00000568499	DDX19B	Q9UMR2	479 aa		18.72	■□□□□ 0.59
KLHDC4-223	ENST00000568499	UTY	O14607	1347 aa		18.72	■□□□□ 0.59
KLHDC4-223	ENST00000568499	RLBP1	P12271	317 aa		18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	MVP	Q14764	893 aa	Known RBP	18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	C2CD5	Q86YS7	1000 aa		18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	SYNE4	Q8N205	404 aa		18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	RPGR	Q92834	1020 aa	Known RBP	18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	FHDC1	Q9C0D6	1143 aa	Predicted RBP	18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	RIC1	Q4ADV7	1423 aa		18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	NRXN2	Q9P2S2	1712 aa		18.71	■□□□□ 0.59
KLHDC4-223	ENST00000568499	AFDN	P55196	1824 aa	Known RBP	18.7	■□□□□ 0.58
KLHDC4-223	ENST00000568499	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.7	■□□□□ 0.58
KLHDC4-223	ENST00000568499	CCDC152	Q4G0S7	254 aa		18.7	■□□□□ 0.58
KLHDC4-223	ENST00000568499	PLA2G12B	Q9BX93	195 aa		18.7	■□□□□ 0.58
KLHDC4-223	ENST00000568499	COG6	Q9Y2V7	657 aa		18.7	■□□□□ 0.58
KLHDC4-223	ENST00000568499	ABCC12	Q96J65	1359 aa		18.69	■□□□□ 0.58
KLHDC4-223	ENST00000568499	CASP7	P55210	303 aa		18.69	■□□□□ 0.58
KLHDC4-223	ENST00000568499	RBM17	Q96I25	401 aa	Known RBP	18.69	■□□□□ 0.58
KLHDC4-223	ENST00000568499	LRP5	O75197	1615 aa		18.69	■□□□□ 0.58
KLHDC4-223	ENST00000568499	KLRG2	A4D1S0	409 aa	Predicted RBP	18.68	■□□□□ 0.58
KLHDC4-223	ENST00000568499	NPR1	P16066	1061 aa		18.68	■□□□□ 0.58
KLHDC4-223	ENST00000568499	CTSW	P56202	376 aa		18.68	■□□□□ 0.58
KLHDC4-223	ENST00000568499	SF3B3	Q15393	1217 aa	Known RBP	18.68	■□□□□ 0.58
KLHDC4-223	ENST00000568499	DDX46	Q7L014	1031 aa	Known RBP	18.68	■□□□□ 0.58
KLHDC4-223	ENST00000568499	MASTL	Q96GX5	879 aa		18.68	■□□□□ 0.58
KLHDC4-223	ENST00000568499	SYT17	Q9BSW7	474 aa		18.68	■□□□□ 0.58
KLHDC4-223	ENST00000568499	GNAI2	P04899	355 aa		18.67	■□□□□ 0.58
KLHDC4-223	ENST00000568499	ALDH1B1	P30837	517 aa		18.67	■□□□□ 0.58
KLHDC4-223	ENST00000568499	STYK1	Q6J9G0	422 aa		18.67	■□□□□ 0.58
KLHDC4-223	ENST00000568499	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
KLHDC4-223	ENST00000568499	MEIS3	Q99687	375 aa		18.67	■□□□□ 0.58
KLHDC4-223	ENST00000568499		A0A0G2JLW4	131 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	ZBTB7B	O15156	539 aa	Predicted RBP	18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	SRGN	P10124	158 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	DPEP1	P16444	411 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	CRY2	Q49AN0	593 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	C20orf194	Q5TEA3	1177 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	CNKSR1	Q969H4	720 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	PIM2	Q9P1W9	311 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	CHMP3	Q9Y3E7	222 aa		18.66	■□□□□ 0.58
KLHDC4-223	ENST00000568499	CHRNA5	P30532	468 aa		18.65	■□□□□ 0.58
KLHDC4-223	ENST00000568499	SUCLG2	Q96I99	432 aa		18.65	■□□□□ 0.58

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